FFCP PHASE1:Mm9::chr7:134954448..134954465,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=56216|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-10bp_to_ENSMUST00000156135_5end|description=CAGE_peak_2_at_Stx1b_5end|id=chr7:134954448..134954465,-|ontology_enrichment_celltype=CL:0000117!5.03e-23!23;CL:0000337!5.03e-23!23;CL:0000540!3.85e-15!33;CL:0000047!3.85e-15!33;CL:0000031!3.85e-15!33;CL:0000404!3.85e-15!33;CL:0000393!1.16e-11!39;CL:0000211!1.16e-11!39;CL:0002319!5.13e-11!43;CL:0000221!1.35e-10!44;CL:0000133!1.35e-10!44;CL:0000055!1.85e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.58e-21,23;CL:0000337,1.58e-21,23;CL:0000540,3.19e-14,33;CL:0000047,3.19e-14,33;CL:0000031,3.19e-14,33;CL:0000404,3.19e-14,33;CL:0000393,1.22e-11,39;CL:0000211,1.22e-11,39;CL:0002614,5.25e-11,3;CL:0002610,5.66e-11,3;CL:0002319,2.56e-10,43;CL:0000221,5.03e-10,44;CL:0000133,5.03e-10,44;CL:0002613,1.14e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.28e-31!73;UBERON:0005743!2.28e-31!73;UBERON:0001049!2.40e-30!52;UBERON:0005068!2.40e-30!52;UBERON:0006241!2.40e-30!52;UBERON:0007135!2.40e-30!52;UBERON:0002020!3.98e-30!34;UBERON:0000073!4.22e-30!75;UBERON:0001016!4.22e-30!75;UBERON:0000955!9.32e-29!50;UBERON:0006238!9.32e-29!50;UBERON:0002616!1.27e-27!49;UBERON:0002791!1.46e-24!29;UBERON:0003528!1.46e-24!29;UBERON:0001893!1.46e-24!29;UBERON:0000033!8.39e-24!63;UBERON:0002346!2.98e-23!71;UBERON:0003075!2.98e-23!71;UBERON:0007284!2.98e-23!71;UBERON:0004121!8.15e-23!102;UBERON:0000924!8.15e-23!102;UBERON:0006601!8.15e-23!102;UBERON:0003080!1.38e-21!40;UBERON:0002780!1.41e-20!39;UBERON:0001890!1.41e-20!39;UBERON:0006240!1.41e-20!39;UBERON:0003056!2.35e-19!49;UBERON:0000956!6.82e-16!21;UBERON:0001869!6.82e-16!21;UBERON:0000203!6.82e-16!21;UBERON:0007811!9.86e-15!86;UBERON:0002021!3.60e-13!10;UBERON:0000411!3.60e-13!10;UBERON:0001950!3.60e-13!10;UBERON:0002619!1.48e-12!17;UBERON:0000153!2.16e-12!94;UBERON:0002420!5.81e-10!8;UBERON:0007245!5.81e-10!8;UBERON:0010009!5.81e-10!8;UBERON:0010011!5.81e-10!8;UBERON:0000454!5.81e-10!8;UBERON:0003076!3.87e-09!12;UBERON:0003057!3.87e-09!12;UBERON:0002298!3.20e-08!6;UBERON:0002240!1.35e-07!6;UBERON:0005174!1.35e-07!6;UBERON:0001137!1.35e-07!6;UBERON:0000025!4.11e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-30,54;UBERON:0001017,5.66e-28,73;UBERON:0001016,4.18e-27,75;UBERON:0002021,8.86e-26,10;UBERON:0000411,8.86e-26,10;UBERON:0001950,8.86e-26,10;UBERON:0002020,1.03e-24,34;UBERON:0000955,1.34e-23,47;UBERON:0006238,1.34e-23,47;UBERON:0001049,1.86e-23,52;UBERON:0005068,1.86e-23,52;UBERON:0006241,1.86e-23,52;UBERON:0007135,1.86e-23,52;UBERON:0003528,1.08e-22,29;UBERON:0002791,1.08e-22,29;UBERON:0001893,1.08e-22,29;UBERON:0002616,1.17e-21,46;UBERON:0004121,2.04e-20,95;UBERON:0000924,2.04e-20,95;UBERON:0006601,2.04e-20,95;UBERON:0003080,3.99e-20,40;UBERON:0002780,2.58e-18,39;UBERON:0001890,2.58e-18,39;UBERON:0006240,2.58e-18,39;UBERON:0002346,2.78e-18,64;UBERON:0003075,2.78e-18,64;UBERON:0007284,2.78e-18,64;UBERON:0003056,8.59e-16,49;UBERON:0010371,1.63e-15,73;UBERON:0002619,1.56e-14,17;UBERON:0002420,4.00e-14,8;UBERON:0007245,4.00e-14,8;UBERON:0010009,4.00e-14,8;UBERON:0010011,4.00e-14,8;UBERON:0000454,4.00e-14,8;UBERON:0002950,1.58e-13,4;UBERON:0001891,1.58e-13,4;UBERON:0009616,1.58e-13,4;UBERON:0010286,1.58e-13,4;UBERON:0000956,1.80e-11,21;UBERON:0001869,1.80e-11,21;UBERON:0000203,1.80e-11,21;UBERON:0010314,1.91e-11,92;UBERON:0002038,5.25e-11,3;UBERON:0009663,5.25e-11,3;UBERON:0009661,5.25e-11,3;UBERON:0000125,5.25e-11,3;UBERON:0002308,5.25e-11,3;UBERON:0004684,5.66e-11,3;UBERON:0002275,5.66e-11,3;UBERON:0000025,2.00e-08,114;UBERON:0004111,1.35e-07,122;UBERON:0011216,1.67e-07,194|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,2.11596391708813,1.26766280701236,0,0,0,0,0,0.599200221036809,0,0.207379224616955,0.540023753326763,0.420649922702764,0.856952953211411,1.54607978666129,0.244981598429908,0.383381884072945,0,2.20231761998777,2.93680877595932,3.37934373163736,1.18697658957174,1.73826522844578,1.56274011167028,4.74611098302348,2.25105044012672,2.59757021220577,0.883885756421003,3.27454865837937,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.8850203613211,0,0,0,0,1.19832511523858,0.457500602818626,0.251308704225729,0.869121600961382,2.04572365864264,0.83115217823824,1.1356888414743,0,0,0,0,0.260240885925407,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.820481806145422,0,0,0,0,0,0,0.222798674082394,0,0,0,0,1.60660658210904,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,2.25900737046827,2.76195141904306,2.29158205375759,1.89038500578056,0.685082519770642,6.0431511791176,1.35004500046361,4.05289082901798,3.17199686288943,1.55328093525546,0.207574695168353,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0,0.409231043169689,0,0,0,0,0,0.191288332068843,0,0|short_description=p2@Stx1b}} | ||
|EntrezGene=56216 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_ENSMUST00000156135_5end | |||
|description=CAGE_peak_2_at_Stx1b_5end | |||
|id=chr7:134954448..134954465,- | |||
|ontology_enrichment_celltype=CL:0000117!5.03e-23!23;CL:0000337!5.03e-23!23;CL:0000540!3.85e-15!33;CL:0000047!3.85e-15!33;CL:0000031!3.85e-15!33;CL:0000404!3.85e-15!33;CL:0000393!1.16e-11!39;CL:0000211!1.16e-11!39;CL:0002319!5.13e-11!43;CL:0000221!1.35e-10!44;CL:0000133!1.35e-10!44;CL:0000055!1.85e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.58e-21,23;CL:0000337,1.58e-21,23;CL:0000540,3.19e-14,33;CL:0000047,3.19e-14,33;CL:0000031,3.19e-14,33;CL:0000404,3.19e-14,33;CL:0000393,1.22e-11,39;CL:0000211,1.22e-11,39;CL:0002614,5.25e-11,3;CL:0002610,5.66e-11,3;CL:0002319,2.56e-10,43;CL:0000221,5.03e-10,44;CL:0000133,5.03e-10,44;CL:0002613,1.14e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.28e-31!73;UBERON:0005743!2.28e-31!73;UBERON:0001049!2.40e-30!52;UBERON:0005068!2.40e-30!52;UBERON:0006241!2.40e-30!52;UBERON:0007135!2.40e-30!52;UBERON:0002020!3.98e-30!34;UBERON:0000073!4.22e-30!75;UBERON:0001016!4.22e-30!75;UBERON:0000955!9.32e-29!50;UBERON:0006238!9.32e-29!50;UBERON:0002616!1.27e-27!49;UBERON:0002791!1.46e-24!29;UBERON:0003528!1.46e-24!29;UBERON:0001893!1.46e-24!29;UBERON:0000033!8.39e-24!63;UBERON:0002346!2.98e-23!71;UBERON:0003075!2.98e-23!71;UBERON:0007284!2.98e-23!71;UBERON:0004121!8.15e-23!102;UBERON:0000924!8.15e-23!102;UBERON:0006601!8.15e-23!102;UBERON:0003080!1.38e-21!40;UBERON:0002780!1.41e-20!39;UBERON:0001890!1.41e-20!39;UBERON:0006240!1.41e-20!39;UBERON:0003056!2.35e-19!49;UBERON:0000956!6.82e-16!21;UBERON:0001869!6.82e-16!21;UBERON:0000203!6.82e-16!21;UBERON:0007811!9.86e-15!86;UBERON:0002021!3.60e-13!10;UBERON:0000411!3.60e-13!10;UBERON:0001950!3.60e-13!10;UBERON:0002619!1.48e-12!17;UBERON:0000153!2.16e-12!94;UBERON:0002420!5.81e-10!8;UBERON:0007245!5.81e-10!8;UBERON:0010009!5.81e-10!8;UBERON:0010011!5.81e-10!8;UBERON:0000454!5.81e-10!8;UBERON:0003076!3.87e-09!12;UBERON:0003057!3.87e-09!12;UBERON:0002298!3.20e-08!6;UBERON:0002240!1.35e-07!6;UBERON:0005174!1.35e-07!6;UBERON:0001137!1.35e-07!6;UBERON:0000025!4.11e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-30,54;UBERON:0001017,5.66e-28,73;UBERON:0001016,4.18e-27,75;UBERON:0002021,8.86e-26,10;UBERON:0000411,8.86e-26,10;UBERON:0001950,8.86e-26,10;UBERON:0002020,1.03e-24,34;UBERON:0000955,1.34e-23,47;UBERON:0006238,1.34e-23,47;UBERON:0001049,1.86e-23,52;UBERON:0005068,1.86e-23,52;UBERON:0006241,1.86e-23,52;UBERON:0007135,1.86e-23,52;UBERON:0003528,1.08e-22,29;UBERON:0002791,1.08e-22,29;UBERON:0001893,1.08e-22,29;UBERON:0002616,1.17e-21,46;UBERON:0004121,2.04e-20,95;UBERON:0000924,2.04e-20,95;UBERON:0006601,2.04e-20,95;UBERON:0003080,3.99e-20,40;UBERON:0002780,2.58e-18,39;UBERON:0001890,2.58e-18,39;UBERON:0006240,2.58e-18,39;UBERON:0002346,2.78e-18,64;UBERON:0003075,2.78e-18,64;UBERON:0007284,2.78e-18,64;UBERON:0003056,8.59e-16,49;UBERON:0010371,1.63e-15,73;UBERON:0002619,1.56e-14,17;UBERON:0002420,4.00e-14,8;UBERON:0007245,4.00e-14,8;UBERON:0010009,4.00e-14,8;UBERON:0010011,4.00e-14,8;UBERON:0000454,4.00e-14,8;UBERON:0002950,1.58e-13,4;UBERON:0001891,1.58e-13,4;UBERON:0009616,1.58e-13,4;UBERON:0010286,1.58e-13,4;UBERON:0000956,1.80e-11,21;UBERON:0001869,1.80e-11,21;UBERON:0000203,1.80e-11,21;UBERON:0010314,1.91e-11,92;UBERON:0002038,5.25e-11,3;UBERON:0009663,5.25e-11,3;UBERON:0009661,5.25e-11,3;UBERON:0000125,5.25e-11,3;UBERON:0002308,5.25e-11,3;UBERON:0004684,5.66e-11,3;UBERON:0002275,5.66e-11,3;UBERON:0000025,2.00e-08,114;UBERON:0004111,1.35e-07,122;UBERON:0011216,1.67e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,2.11596391708813,1.26766280701236,0,0,0,0,0,0.599200221036809,0,0.207379224616955,0.540023753326763,0.420649922702764,0.856952953211411,1.54607978666129,0.244981598429908,0.383381884072945,0,2.20231761998777,2.93680877595932,3.37934373163736,1.18697658957174,1.73826522844578,1.56274011167028,4.74611098302348,2.25105044012672,2.59757021220577,0.883885756421003,3.27454865837937,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.8850203613211,0,0,0,0,1.19832511523858,0.457500602818626,0.251308704225729,0.869121600961382,2.04572365864264,0.83115217823824,1.1356888414743,0,0,0,0,0.260240885925407,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.820481806145422,0,0,0,0,0,0,0.222798674082394,0,0,0,0,1.60660658210904,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,2.25900737046827,2.76195141904306,2.29158205375759,1.89038500578056,0.685082519770642,6.0431511791176,1.35004500046361,4.05289082901798,3.17199686288943,1.55328093525546,0.207574695168353,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0,0.409231043169689,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p2@Stx1b | |||
}} |
Revision as of 11:57, 14 September 2013
Short description: | p2@Stx1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Stx1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -10bp_to_ENSMUST00000156135_5end |
EntrezGene: | Stx1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.58e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.58e-21 | 23 |
neuron | 3.19e-14 | 33 |
neuronal stem cell | 3.19e-14 | 33 |
neuroblast | 3.19e-14 | 33 |
electrically signaling cell | 3.19e-14 | 33 |
electrically responsive cell | 1.22e-11 | 39 |
electrically active cell | 1.22e-11 | 39 |
neuron of the substantia nigra | 5.25e-11 | 3 |
raphe nuclei neuron | 5.66e-11 | 3 |
neural cell | 2.56e-10 | 43 |
ectodermal cell | 5.03e-10 | 44 |
neurectodermal cell | 5.03e-10 | 44 |
striatum neuron | 1.14e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.