FFCP PHASE1:Mm9::chr8:72632405..72632429,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=530|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:72632405..72632429,-|id=chr8:72632405..72632429,-|ontology_enrichment_celltype=CL:0000117!1.52e-16!23;CL:0000337!1.52e-16!23;CL:0002319!9.55e-14!43;CL:0000221!3.20e-13!44;CL:0000133!3.20e-13!44;CL:0000540!1.41e-10!33;CL:0000047!1.41e-10!33;CL:0000031!1.41e-10!33;CL:0000404!1.41e-10!33;CL:0000055!1.52e-10!50;CL:0000393!6.29e-08!39;CL:0000211!6.29e-08!39;CL:0002609!1.84e-07!6|ontology_enrichment_celltype_v019_2=CL:0002319,2.00e-24,43;CL:0000117,7.35e-24,23;CL:0000337,7.35e-24,23;CL:0000221,9.17e-24,44;CL:0000133,9.17e-24,44;CL:0000540,1.23e-15,33;CL:0000047,1.23e-15,33;CL:0000031,1.23e-15,33;CL:0000404,1.23e-15,33;CL:0002321,3.29e-13,70;CL:0002453,8.44e-13,8;CL:0000393,9.92e-13,39;CL:0000211,9.92e-13,39;CL:0002609,1.82e-11,6;CL:0000333,4.26e-10,10;CL:0000095,4.26e-10,10;CL:0000243,4.26e-10,10;CL:0000123,4.26e-10,10;CL:0000125,4.26e-10,10;CL:0000030,4.26e-10,10;CL:0000339,4.26e-10,10;CL:0002612,2.61e-09,3;CL:0002613,5.24e-09,3;CL:0002608,9.18e-09,3;CL:0000128,1.01e-07,6;CL:0000126,1.01e-07,6;CL:0000127,1.01e-07,6;CL:0000878,2.29e-07,2;CL:0000129,2.29e-07,2;CL:0002605,9.26e-07,2;CL:0002604,9.26e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!8.72e-30!34;UBERON:0001017!1.52e-29!73;UBERON:0005743!1.52e-29!73;UBERON:0001049!1.89e-29!52;UBERON:0005068!1.89e-29!52;UBERON:0006241!1.89e-29!52;UBERON:0007135!1.89e-29!52;UBERON:0000073!2.77e-28!75;UBERON:0001016!2.77e-28!75;UBERON:0000955!2.43e-25!50;UBERON:0006238!2.43e-25!50;UBERON:0002616!3.17e-24!49;UBERON:0002791!3.37e-24!29;UBERON:0003528!3.37e-24!29;UBERON:0001893!3.37e-24!29;UBERON:0002346!7.57e-24!71;UBERON:0003075!7.57e-24!71;UBERON:0007284!7.57e-24!71;UBERON:0000033!1.42e-22!63;UBERON:0003080!1.12e-21!40;UBERON:0004121!2.02e-21!102;UBERON:0000924!2.02e-21!102;UBERON:0006601!2.02e-21!102;UBERON:0003056!3.17e-21!49;UBERON:0002780!8.02e-21!39;UBERON:0001890!8.02e-21!39;UBERON:0006240!8.02e-21!39;UBERON:0000956!4.13e-19!21;UBERON:0001869!4.13e-19!21;UBERON:0000203!4.13e-19!21;UBERON:0002619!2.56e-15!17;UBERON:0007811!9.46e-13!86;UBERON:0000153!1.53e-10!94;UBERON:0001954!9.91e-09!7;UBERON:0003022!9.91e-09!7;UBERON:0002421!9.91e-09!7;UBERON:0000349!9.91e-09!7;UBERON:0002600!9.91e-09!7;UBERON:0002021!3.53e-08!10;UBERON:0000411!3.53e-08!10;UBERON:0001950!3.53e-08!10;UBERON:0003076!3.77e-08!12;UBERON:0003057!3.77e-08!12;UBERON:0002240!2.44e-07!6;UBERON:0005174!2.44e-07!6;UBERON:0001137!2.44e-07!6;UBERON:0001948!9.65e-07!5;UBERON:0002315!9.65e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.45e-42,34;UBERON:0001017,1.73e-33,73;UBERON:0001016,1.93e-32,75;UBERON:0001049,6.27e-31,52;UBERON:0005068,6.27e-31,52;UBERON:0006241,6.27e-31,52;UBERON:0007135,6.27e-31,52;UBERON:0003528,2.83e-30,29;UBERON:0002791,2.83e-30,29;UBERON:0001893,2.83e-30,29;UBERON:0000073,1.39e-29,54;UBERON:0000956,4.59e-26,21;UBERON:0001869,4.59e-26,21;UBERON:0000203,4.59e-26,21;UBERON:0004121,2.27e-24,95;UBERON:0000924,2.27e-24,95;UBERON:0006601,2.27e-24,95;UBERON:0002619,2.92e-24,17;UBERON:0002346,4.10e-24,64;UBERON:0003075,4.10e-24,64;UBERON:0007284,4.10e-24,64;UBERON:0000955,5.66e-24,47;UBERON:0006238,5.66e-24,47;UBERON:0002616,4.86e-22,46;UBERON:0002780,1.97e-21,39;UBERON:0001890,1.97e-21,39;UBERON:0006240,1.97e-21,39;UBERON:0003080,8.62e-21,40;UBERON:0010371,1.81e-20,73;UBERON:0001954,1.00e-18,7;UBERON:0003022,1.00e-18,7;UBERON:0002421,1.00e-18,7;UBERON:0000349,1.00e-18,7;UBERON:0002600,1.00e-18,7;UBERON:0003056,3.36e-16,49;UBERON:0010314,4.12e-15,92;UBERON:0001948,5.57e-14,5;UBERON:0002315,5.57e-14,5;UBERON:0002240,1.34e-11,6;UBERON:0005174,1.34e-11,6;UBERON:0001137,1.34e-11,6;UBERON:0000025,3.91e-11,114;UBERON:0003076,1.14e-10,12;UBERON:0003057,1.14e-10,12;UBERON:0004111,4.82e-10,122;UBERON:0000369,2.13e-09,5;UBERON:0002435,2.13e-09,5;UBERON:0000204,2.13e-09,5;UBERON:0010082,2.13e-09,5;UBERON:0002257,2.61e-09,3;UBERON:0002021,6.69e-09,10;UBERON:0000411,6.69e-09,10;UBERON:0001950,6.69e-09,10;UBERON:0011216,8.19e-09,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14247797122848,2.85592037554813,2.72201858703997,1.1198913730029,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,0,0,0,0,0,0,9.88680364710736,7.30014780110954,1.65903379693564,3.51015439662396,0.841299845405528,1.71390590642282,1.54607978666129,1.83736198822431,1.43768206527355,1.83843757322004,0,0.510749352340751,0.614426133024974,2.1101806036831,2.8361169516747,1.56274011167028,0.279182999001381,0,0.15279824777681,5.89257170947335,3.27454865837937,1.4911955666024,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0,0,0,1.46612694769419,0,0,0,0,0.898743836428936,0.915001205637253,3.76963056338593,0.521472960576829,0.511430914660661,0.20778804455956,0.973447578406546,0,0,0,0,0.130120442962704,0,0,0,0.204109497453984,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.26173969138476,4.01327988279209,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0.395287777946524,3.53453448063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,0.460325236507177,1.71868654031819,1.3748254587495,1.37016503954128,0,1.35004500046361,0.45032120322422,1.35942722695261,0.51776031175182,0,1.59609949360412,0.682934423016537,0.486213434136588,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.37456602987953,0.128050304809739,0.114870937911227,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0.355905054372522,0.29551344712669,0,0.154936841185966,0.385813221962283,0.999242311751784,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr8:72632405..72632429,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=530 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:72632405..72632429,- | |||
|id=chr8:72632405..72632429,- | |||
|ontology_enrichment_celltype=CL:0000117!1.52e-16!23;CL:0000337!1.52e-16!23;CL:0002319!9.55e-14!43;CL:0000221!3.20e-13!44;CL:0000133!3.20e-13!44;CL:0000540!1.41e-10!33;CL:0000047!1.41e-10!33;CL:0000031!1.41e-10!33;CL:0000404!1.41e-10!33;CL:0000055!1.52e-10!50;CL:0000393!6.29e-08!39;CL:0000211!6.29e-08!39;CL:0002609!1.84e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.00e-24,43;CL:0000117,7.35e-24,23;CL:0000337,7.35e-24,23;CL:0000221,9.17e-24,44;CL:0000133,9.17e-24,44;CL:0000540,1.23e-15,33;CL:0000047,1.23e-15,33;CL:0000031,1.23e-15,33;CL:0000404,1.23e-15,33;CL:0002321,3.29e-13,70;CL:0002453,8.44e-13,8;CL:0000393,9.92e-13,39;CL:0000211,9.92e-13,39;CL:0002609,1.82e-11,6;CL:0000333,4.26e-10,10;CL:0000095,4.26e-10,10;CL:0000243,4.26e-10,10;CL:0000123,4.26e-10,10;CL:0000125,4.26e-10,10;CL:0000030,4.26e-10,10;CL:0000339,4.26e-10,10;CL:0002612,2.61e-09,3;CL:0002613,5.24e-09,3;CL:0002608,9.18e-09,3;CL:0000128,1.01e-07,6;CL:0000126,1.01e-07,6;CL:0000127,1.01e-07,6;CL:0000878,2.29e-07,2;CL:0000129,2.29e-07,2;CL:0002605,9.26e-07,2;CL:0002604,9.26e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.72e-30!34;UBERON:0001017!1.52e-29!73;UBERON:0005743!1.52e-29!73;UBERON:0001049!1.89e-29!52;UBERON:0005068!1.89e-29!52;UBERON:0006241!1.89e-29!52;UBERON:0007135!1.89e-29!52;UBERON:0000073!2.77e-28!75;UBERON:0001016!2.77e-28!75;UBERON:0000955!2.43e-25!50;UBERON:0006238!2.43e-25!50;UBERON:0002616!3.17e-24!49;UBERON:0002791!3.37e-24!29;UBERON:0003528!3.37e-24!29;UBERON:0001893!3.37e-24!29;UBERON:0002346!7.57e-24!71;UBERON:0003075!7.57e-24!71;UBERON:0007284!7.57e-24!71;UBERON:0000033!1.42e-22!63;UBERON:0003080!1.12e-21!40;UBERON:0004121!2.02e-21!102;UBERON:0000924!2.02e-21!102;UBERON:0006601!2.02e-21!102;UBERON:0003056!3.17e-21!49;UBERON:0002780!8.02e-21!39;UBERON:0001890!8.02e-21!39;UBERON:0006240!8.02e-21!39;UBERON:0000956!4.13e-19!21;UBERON:0001869!4.13e-19!21;UBERON:0000203!4.13e-19!21;UBERON:0002619!2.56e-15!17;UBERON:0007811!9.46e-13!86;UBERON:0000153!1.53e-10!94;UBERON:0001954!9.91e-09!7;UBERON:0003022!9.91e-09!7;UBERON:0002421!9.91e-09!7;UBERON:0000349!9.91e-09!7;UBERON:0002600!9.91e-09!7;UBERON:0002021!3.53e-08!10;UBERON:0000411!3.53e-08!10;UBERON:0001950!3.53e-08!10;UBERON:0003076!3.77e-08!12;UBERON:0003057!3.77e-08!12;UBERON:0002240!2.44e-07!6;UBERON:0005174!2.44e-07!6;UBERON:0001137!2.44e-07!6;UBERON:0001948!9.65e-07!5;UBERON:0002315!9.65e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.45e-42,34;UBERON:0001017,1.73e-33,73;UBERON:0001016,1.93e-32,75;UBERON:0001049,6.27e-31,52;UBERON:0005068,6.27e-31,52;UBERON:0006241,6.27e-31,52;UBERON:0007135,6.27e-31,52;UBERON:0003528,2.83e-30,29;UBERON:0002791,2.83e-30,29;UBERON:0001893,2.83e-30,29;UBERON:0000073,1.39e-29,54;UBERON:0000956,4.59e-26,21;UBERON:0001869,4.59e-26,21;UBERON:0000203,4.59e-26,21;UBERON:0004121,2.27e-24,95;UBERON:0000924,2.27e-24,95;UBERON:0006601,2.27e-24,95;UBERON:0002619,2.92e-24,17;UBERON:0002346,4.10e-24,64;UBERON:0003075,4.10e-24,64;UBERON:0007284,4.10e-24,64;UBERON:0000955,5.66e-24,47;UBERON:0006238,5.66e-24,47;UBERON:0002616,4.86e-22,46;UBERON:0002780,1.97e-21,39;UBERON:0001890,1.97e-21,39;UBERON:0006240,1.97e-21,39;UBERON:0003080,8.62e-21,40;UBERON:0010371,1.81e-20,73;UBERON:0001954,1.00e-18,7;UBERON:0003022,1.00e-18,7;UBERON:0002421,1.00e-18,7;UBERON:0000349,1.00e-18,7;UBERON:0002600,1.00e-18,7;UBERON:0003056,3.36e-16,49;UBERON:0010314,4.12e-15,92;UBERON:0001948,5.57e-14,5;UBERON:0002315,5.57e-14,5;UBERON:0002240,1.34e-11,6;UBERON:0005174,1.34e-11,6;UBERON:0001137,1.34e-11,6;UBERON:0000025,3.91e-11,114;UBERON:0003076,1.14e-10,12;UBERON:0003057,1.14e-10,12;UBERON:0004111,4.82e-10,122;UBERON:0000369,2.13e-09,5;UBERON:0002435,2.13e-09,5;UBERON:0000204,2.13e-09,5;UBERON:0010082,2.13e-09,5;UBERON:0002257,2.61e-09,3;UBERON:0002021,6.69e-09,10;UBERON:0000411,6.69e-09,10;UBERON:0001950,6.69e-09,10;UBERON:0011216,8.19e-09,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14247797122848,2.85592037554813,2.72201858703997,1.1198913730029,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,0,0,0,0,0,0,9.88680364710736,7.30014780110954,1.65903379693564,3.51015439662396,0.841299845405528,1.71390590642282,1.54607978666129,1.83736198822431,1.43768206527355,1.83843757322004,0,0.510749352340751,0.614426133024974,2.1101806036831,2.8361169516747,1.56274011167028,0.279182999001381,0,0.15279824777681,5.89257170947335,3.27454865837937,1.4911955666024,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0,0,0,1.46612694769419,0,0,0,0,0.898743836428936,0.915001205637253,3.76963056338593,0.521472960576829,0.511430914660661,0.20778804455956,0.973447578406546,0,0,0,0,0.130120442962704,0,0,0,0.204109497453984,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.26173969138476,4.01327988279209,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0.395287777946524,3.53453448063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,0.460325236507177,1.71868654031819,1.3748254587495,1.37016503954128,0,1.35004500046361,0.45032120322422,1.35942722695261,0.51776031175182,0,1.59609949360412,0.682934423016537,0.486213434136588,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.37456602987953,0.128050304809739,0.114870937911227,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0.355905054372522,0.29551344712669,0,0.154936841185966,0.385813221962283,0.999242311751784,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr8:72632405..72632429,- | |||
}} |
Revision as of 15:56, 14 September 2013
Short description: | p@chr8:72632405..72632429, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:72632405..72632429, - |
Coexpression cluster: | MCL_coexpression_mm9:530 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.00e-24 | 43 |
CNS neuron (sensu Vertebrata) | 7.35e-24 | 23 |
neuroblast (sensu Vertebrata) | 7.35e-24 | 23 |
ectodermal cell | 9.17e-24 | 44 |
neurectodermal cell | 9.17e-24 | 44 |
neuron | 1.23e-15 | 33 |
neuronal stem cell | 1.23e-15 | 33 |
neuroblast | 1.23e-15 | 33 |
electrically signaling cell | 1.23e-15 | 33 |
embryonic cell | 3.29e-13 | 70 |
oligodendrocyte precursor cell | 8.44e-13 | 8 |
electrically responsive cell | 9.92e-13 | 39 |
electrically active cell | 9.92e-13 | 39 |
neuron of cerebral cortex | 1.82e-11 | 6 |
migratory neural crest cell | 4.26e-10 | 10 |
neuron associated cell | 4.26e-10 | 10 |
glial cell (sensu Vertebrata) | 4.26e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 4.26e-10 | 10 |
glial cell | 4.26e-10 | 10 |
glioblast | 4.26e-10 | 10 |
glioblast (sensu Vertebrata) | 4.26e-10 | 10 |
neuron of the ventral spinal cord | 2.61e-09 | 3 |
striatum neuron | 5.24e-09 | 3 |
hippocampal neuron | 9.18e-09 | 3 |
oligodendrocyte | 1.01e-07 | 6 |
macroglial cell | 1.01e-07 | 6 |
astrocyte | 1.01e-07 | 6 |
central nervous system macrophage | 2.29e-07 | 2 |
microglial cell | 2.29e-07 | 2 |
astrocyte of the cerebral cortex | 9.26e-07 | 2 |
astrocyte of the hippocampus | 9.26e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.