FFCP PHASE1:Mm9::chr7:25286643..25286656,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=747|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:25286643..25286656,+|id=chr7:25286643..25286656,+|ontology_enrichment_celltype=CL:0000221!4.97e-22!44;CL:0000133!4.97e-22!44;CL:0002319!3.43e-21!43;CL:0000055!6.43e-18!50;CL:0000540!1.15e-17!33;CL:0000047!1.15e-17!33;CL:0000031!1.15e-17!33;CL:0000404!1.15e-17!33;CL:0000393!5.71e-15!39;CL:0000211!5.71e-15!39;CL:0000117!1.15e-14!23;CL:0000337!1.15e-14!23;CL:0002321!1.31e-10!70;CL:0000220!1.31e-10!70|ontology_enrichment_celltype_v019_2=CL:0000117,2.01e-22,23;CL:0000337,2.01e-22,23;CL:0000221,3.64e-19,44;CL:0000133,3.64e-19,44;CL:0002319,2.75e-17,43;CL:0000540,7.36e-15,33;CL:0000047,7.36e-15,33;CL:0000031,7.36e-15,33;CL:0000404,7.36e-15,33;CL:0000393,3.49e-12,39;CL:0000211,3.49e-12,39;CL:0002321,8.94e-11,70;CL:0002612,1.10e-10,3;CL:0002614,1.18e-10,3;CL:0000878,1.87e-08,2;CL:0000129,1.87e-08,2;CL:0002611,1.87e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.79e-36!75;UBERON:0001016!1.79e-36!75;UBERON:0001017!1.21e-35!73;UBERON:0005743!1.21e-35!73;UBERON:0004121!5.62e-27!102;UBERON:0000924!5.62e-27!102;UBERON:0006601!5.62e-27!102;UBERON:0001049!4.87e-26!52;UBERON:0005068!4.87e-26!52;UBERON:0006241!4.87e-26!52;UBERON:0007135!4.87e-26!52;UBERON:0002020!2.49e-22!34;UBERON:0000955!4.14e-22!50;UBERON:0006238!4.14e-22!50;UBERON:0002616!1.19e-21!49;UBERON:0000033!6.42e-21!63;UBERON:0002346!7.36e-20!71;UBERON:0003075!7.36e-20!71;UBERON:0007284!7.36e-20!71;UBERON:0003080!3.38e-18!40;UBERON:0002791!7.48e-18!29;UBERON:0003528!7.48e-18!29;UBERON:0001893!7.48e-18!29;UBERON:0002780!8.77e-18!39;UBERON:0001890!8.77e-18!39;UBERON:0006240!8.77e-18!39;UBERON:0003056!1.39e-15!49;UBERON:0000956!3.49e-12!21;UBERON:0001869!3.49e-12!21;UBERON:0000203!3.49e-12!21;UBERON:0007811!2.69e-10!86;UBERON:0002619!9.08e-10!17;UBERON:0000153!1.65e-08!94;UBERON:0003076!1.89e-08!12;UBERON:0003057!1.89e-08!12;UBERON:0004111!3.15e-07!122;UBERON:0002021!3.35e-07!10;UBERON:0000411!3.35e-07!10;UBERON:0001950!3.35e-07!10;UBERON:0000025!4.04e-07!114;UBERON:0002420!5.86e-07!8;UBERON:0007245!5.86e-07!8;UBERON:0010009!5.86e-07!8;UBERON:0010011!5.86e-07!8;UBERON:0000454!5.86e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.53e-27,73;UBERON:0000073,3.76e-26,54;UBERON:0001016,4.46e-26,75;UBERON:0002020,2.26e-25,34;UBERON:0001049,1.81e-24,52;UBERON:0005068,1.81e-24,52;UBERON:0006241,1.81e-24,52;UBERON:0007135,1.81e-24,52;UBERON:0004121,1.63e-21,95;UBERON:0000924,1.63e-21,95;UBERON:0006601,1.63e-21,95;UBERON:0003076,1.95e-21,12;UBERON:0003057,1.95e-21,12;UBERON:0002240,3.64e-20,6;UBERON:0005174,3.64e-20,6;UBERON:0001137,3.64e-20,6;UBERON:0002346,3.95e-19,64;UBERON:0003075,3.95e-19,64;UBERON:0007284,3.95e-19,64;UBERON:0010371,3.96e-18,73;UBERON:0001948,1.77e-17,5;UBERON:0002315,1.77e-17,5;UBERON:0002021,2.41e-15,10;UBERON:0000411,2.41e-15,10;UBERON:0001950,2.41e-15,10;UBERON:0003528,3.08e-14,29;UBERON:0002791,3.08e-14,29;UBERON:0001893,3.08e-14,29;UBERON:0010314,1.61e-13,92;UBERON:0002616,2.91e-13,46;UBERON:0000955,6.44e-13,47;UBERON:0006238,6.44e-13,47;UBERON:0002257,1.10e-10,3;UBERON:0002038,1.18e-10,3;UBERON:0009663,1.18e-10,3;UBERON:0009661,1.18e-10,3;UBERON:0000125,1.18e-10,3;UBERON:0002308,1.18e-10,3;UBERON:0002780,5.19e-10,39;UBERON:0001890,5.19e-10,39;UBERON:0006240,5.19e-10,39;UBERON:0003080,1.05e-09,40;UBERON:0004111,3.77e-09,122;UBERON:0000956,5.32e-09,21;UBERON:0001869,5.32e-09,21;UBERON:0000203,5.32e-09,21;UBERON:0000025,5.98e-09,114;UBERON:0002619,1.14e-08,17;UBERON:0002256,1.87e-08,2;UBERON:0011216,3.57e-08,194;UBERON:0002950,4.23e-08,4;UBERON:0001891,4.23e-08,4;UBERON:0009616,4.23e-08,4;UBERON:0010286,4.23e-08,4;UBERON:0003056,1.63e-07,49;UBERON:0002420,8.87e-07,8;UBERON:0007245,8.87e-07,8;UBERON:0010009,8.87e-07,8;UBERON:0010011,8.87e-07,8;UBERON:0000454,8.87e-07,8|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.52617609466313,0.659058548203415,0.58328969722285,0.979904951377538,0,0,0,0,0,0,0.515672092277442,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0,0,3.59520132622086,8.06858441175265,0.829516898467821,2.43010688997043,0.420649922702764,3.71346279724945,4.19650227808066,0.857435594504678,0.766763768145891,0,0,1.40456071893706,1.84327839907492,0.659431438650969,1.18933936683133,0.52091337055676,2.51264699101243,1.68828783009504,1.06958773443767,1.47314292736834,2.84743361598206,1.1183966749518,0.681535739998656,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,1.46612694769419,0,0,0,0,0.299581278809645,0.457500602818626,0.879580464790051,0.347648640384553,0.511430914660661,0.41557608911912,0.811206315338788,0.101839363850316,0,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0.374806898238915,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0.268412837520744,0.420579897128254,0.720332286654991,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.481651769963376,1.17211686592203,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0.177340233642274,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0.328281799490123,0,1.11255181206306,0.170870880797853,0.206386867963223,0,0,0.27338845544205,0,0,0,0,0,0,0,0,0.418176592028937,0,0,0,0.26175594198403,0.129614973291793,0.621339313086926,0,0.299033092087958,0.496375471371293,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,1.12950368523413,0.920650473014354,1.71868654031819,1.54667864109319,1.37016503954128,0.755393897389701,2.70009000092722,1.35096360967266,0,1.03552062350364,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.468207537349412,0.192075457214608,0,0,0.231768651889711,0,0.824171801606613,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.282328141245992,0.25384382367503,0.182927972872773,0.526139422875686,0.135804113845862,0,0,0,0.818462086339379,0.154936841185966,0,0.499621155875892,0,0,0,0,0|short_description=p@chr7:25286643..25286656,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=747 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:25286643..25286656,+ | |||
|id=chr7:25286643..25286656,+ | |||
|ontology_enrichment_celltype=CL:0000221!4.97e-22!44;CL:0000133!4.97e-22!44;CL:0002319!3.43e-21!43;CL:0000055!6.43e-18!50;CL:0000540!1.15e-17!33;CL:0000047!1.15e-17!33;CL:0000031!1.15e-17!33;CL:0000404!1.15e-17!33;CL:0000393!5.71e-15!39;CL:0000211!5.71e-15!39;CL:0000117!1.15e-14!23;CL:0000337!1.15e-14!23;CL:0002321!1.31e-10!70;CL:0000220!1.31e-10!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.01e-22,23;CL:0000337,2.01e-22,23;CL:0000221,3.64e-19,44;CL:0000133,3.64e-19,44;CL:0002319,2.75e-17,43;CL:0000540,7.36e-15,33;CL:0000047,7.36e-15,33;CL:0000031,7.36e-15,33;CL:0000404,7.36e-15,33;CL:0000393,3.49e-12,39;CL:0000211,3.49e-12,39;CL:0002321,8.94e-11,70;CL:0002612,1.10e-10,3;CL:0002614,1.18e-10,3;CL:0000878,1.87e-08,2;CL:0000129,1.87e-08,2;CL:0002611,1.87e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.79e-36!75;UBERON:0001016!1.79e-36!75;UBERON:0001017!1.21e-35!73;UBERON:0005743!1.21e-35!73;UBERON:0004121!5.62e-27!102;UBERON:0000924!5.62e-27!102;UBERON:0006601!5.62e-27!102;UBERON:0001049!4.87e-26!52;UBERON:0005068!4.87e-26!52;UBERON:0006241!4.87e-26!52;UBERON:0007135!4.87e-26!52;UBERON:0002020!2.49e-22!34;UBERON:0000955!4.14e-22!50;UBERON:0006238!4.14e-22!50;UBERON:0002616!1.19e-21!49;UBERON:0000033!6.42e-21!63;UBERON:0002346!7.36e-20!71;UBERON:0003075!7.36e-20!71;UBERON:0007284!7.36e-20!71;UBERON:0003080!3.38e-18!40;UBERON:0002791!7.48e-18!29;UBERON:0003528!7.48e-18!29;UBERON:0001893!7.48e-18!29;UBERON:0002780!8.77e-18!39;UBERON:0001890!8.77e-18!39;UBERON:0006240!8.77e-18!39;UBERON:0003056!1.39e-15!49;UBERON:0000956!3.49e-12!21;UBERON:0001869!3.49e-12!21;UBERON:0000203!3.49e-12!21;UBERON:0007811!2.69e-10!86;UBERON:0002619!9.08e-10!17;UBERON:0000153!1.65e-08!94;UBERON:0003076!1.89e-08!12;UBERON:0003057!1.89e-08!12;UBERON:0004111!3.15e-07!122;UBERON:0002021!3.35e-07!10;UBERON:0000411!3.35e-07!10;UBERON:0001950!3.35e-07!10;UBERON:0000025!4.04e-07!114;UBERON:0002420!5.86e-07!8;UBERON:0007245!5.86e-07!8;UBERON:0010009!5.86e-07!8;UBERON:0010011!5.86e-07!8;UBERON:0000454!5.86e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.53e-27,73;UBERON:0000073,3.76e-26,54;UBERON:0001016,4.46e-26,75;UBERON:0002020,2.26e-25,34;UBERON:0001049,1.81e-24,52;UBERON:0005068,1.81e-24,52;UBERON:0006241,1.81e-24,52;UBERON:0007135,1.81e-24,52;UBERON:0004121,1.63e-21,95;UBERON:0000924,1.63e-21,95;UBERON:0006601,1.63e-21,95;UBERON:0003076,1.95e-21,12;UBERON:0003057,1.95e-21,12;UBERON:0002240,3.64e-20,6;UBERON:0005174,3.64e-20,6;UBERON:0001137,3.64e-20,6;UBERON:0002346,3.95e-19,64;UBERON:0003075,3.95e-19,64;UBERON:0007284,3.95e-19,64;UBERON:0010371,3.96e-18,73;UBERON:0001948,1.77e-17,5;UBERON:0002315,1.77e-17,5;UBERON:0002021,2.41e-15,10;UBERON:0000411,2.41e-15,10;UBERON:0001950,2.41e-15,10;UBERON:0003528,3.08e-14,29;UBERON:0002791,3.08e-14,29;UBERON:0001893,3.08e-14,29;UBERON:0010314,1.61e-13,92;UBERON:0002616,2.91e-13,46;UBERON:0000955,6.44e-13,47;UBERON:0006238,6.44e-13,47;UBERON:0002257,1.10e-10,3;UBERON:0002038,1.18e-10,3;UBERON:0009663,1.18e-10,3;UBERON:0009661,1.18e-10,3;UBERON:0000125,1.18e-10,3;UBERON:0002308,1.18e-10,3;UBERON:0002780,5.19e-10,39;UBERON:0001890,5.19e-10,39;UBERON:0006240,5.19e-10,39;UBERON:0003080,1.05e-09,40;UBERON:0004111,3.77e-09,122;UBERON:0000956,5.32e-09,21;UBERON:0001869,5.32e-09,21;UBERON:0000203,5.32e-09,21;UBERON:0000025,5.98e-09,114;UBERON:0002619,1.14e-08,17;UBERON:0002256,1.87e-08,2;UBERON:0011216,3.57e-08,194;UBERON:0002950,4.23e-08,4;UBERON:0001891,4.23e-08,4;UBERON:0009616,4.23e-08,4;UBERON:0010286,4.23e-08,4;UBERON:0003056,1.63e-07,49;UBERON:0002420,8.87e-07,8;UBERON:0007245,8.87e-07,8;UBERON:0010009,8.87e-07,8;UBERON:0010011,8.87e-07,8;UBERON:0000454,8.87e-07,8 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.52617609466313,0.659058548203415,0.58328969722285,0.979904951377538,0,0,0,0,0,0,0.515672092277442,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0,0,3.59520132622086,8.06858441175265,0.829516898467821,2.43010688997043,0.420649922702764,3.71346279724945,4.19650227808066,0.857435594504678,0.766763768145891,0,0,1.40456071893706,1.84327839907492,0.659431438650969,1.18933936683133,0.52091337055676,2.51264699101243,1.68828783009504,1.06958773443767,1.47314292736834,2.84743361598206,1.1183966749518,0.681535739998656,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,1.46612694769419,0,0,0,0,0.299581278809645,0.457500602818626,0.879580464790051,0.347648640384553,0.511430914660661,0.41557608911912,0.811206315338788,0.101839363850316,0,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0.374806898238915,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0.268412837520744,0.420579897128254,0.720332286654991,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.481651769963376,1.17211686592203,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0.177340233642274,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0.328281799490123,0,1.11255181206306,0.170870880797853,0.206386867963223,0,0,0.27338845544205,0,0,0,0,0,0,0,0,0.418176592028937,0,0,0,0.26175594198403,0.129614973291793,0.621339313086926,0,0.299033092087958,0.496375471371293,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,1.12950368523413,0.920650473014354,1.71868654031819,1.54667864109319,1.37016503954128,0.755393897389701,2.70009000092722,1.35096360967266,0,1.03552062350364,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.468207537349412,0.192075457214608,0,0,0.231768651889711,0,0.824171801606613,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.282328141245992,0.25384382367503,0.182927972872773,0.526139422875686,0.135804113845862,0,0,0,0.818462086339379,0.154936841185966,0,0.499621155875892,0,0,0,0,0 | |||
|short_description=p@chr7:25286643..25286656,+ | |||
}} |
Revision as of 12:47, 14 September 2013
Short description: | p@chr7:25286643..25286656, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:25286643..25286656, + |
Coexpression cluster: | MCL_coexpression_mm9:747 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.01e-22 | 23 |
neuroblast (sensu Vertebrata) | 2.01e-22 | 23 |
ectodermal cell | 3.64e-19 | 44 |
neurectodermal cell | 3.64e-19 | 44 |
neural cell | 2.75e-17 | 43 |
neuron | 7.36e-15 | 33 |
neuronal stem cell | 7.36e-15 | 33 |
neuroblast | 7.36e-15 | 33 |
electrically signaling cell | 7.36e-15 | 33 |
electrically responsive cell | 3.49e-12 | 39 |
electrically active cell | 3.49e-12 | 39 |
embryonic cell | 8.94e-11 | 70 |
neuron of the ventral spinal cord | 1.10e-10 | 3 |
neuron of the substantia nigra | 1.18e-10 | 3 |
central nervous system macrophage | 1.87e-08 | 2 |
microglial cell | 1.87e-08 | 2 |
neuron of the dorsal spinal cord | 1.87e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.