FFCP PHASE1:Mm9::chr2:136213665..136213721,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=241656|HGNC=|MCL_coexpression_id=1|UniProt=Q8C015,B1AYC2,Q4KL59|association_with_transcript=0bp_to_ENSMUST00000035264,ENSMUST00000077200,ENSMUST00000143329,NM_172858,uc008moh.1,uc008moi.1,uc008moj.1_5end|description=CAGE_peak_2_at_Pak7_5end|id=chr2:136213665..136213721,-|ontology_enrichment_celltype=CL:0000117!1.14e-14!23;CL:0000337!1.14e-14!23;CL:0000540!1.46e-13!33;CL:0000047!1.46e-13!33;CL:0000031!1.46e-13!33;CL:0000404!1.46e-13!33;CL:0000393!1.91e-09!39;CL:0000211!1.91e-09!39;CL:0002319!1.22e-08!43;CL:0000221!1.34e-08!44;CL:0000133!1.34e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.21e-21,23;CL:0000337,1.21e-21,23;CL:0000540,8.14e-14,33;CL:0000047,8.14e-14,33;CL:0000031,8.14e-14,33;CL:0000404,8.14e-14,33;CL:0000393,1.54e-10,39;CL:0000211,1.54e-10,39;CL:0002319,6.79e-09,43;CL:0000221,1.55e-08,44;CL:0000133,1.55e-08,44;CL:0002609,4.90e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.12e-25!71;UBERON:0003075!4.12e-25!71;UBERON:0007284!4.12e-25!71;UBERON:0001017!8.52e-25!73;UBERON:0005743!8.52e-25!73;UBERON:0000073!3.78e-24!75;UBERON:0001016!3.78e-24!75;UBERON:0000033!2.73e-23!63;UBERON:0001049!2.74e-22!52;UBERON:0005068!2.74e-22!52;UBERON:0006241!2.74e-22!52;UBERON:0007135!2.74e-22!52;UBERON:0004121!5.48e-22!102;UBERON:0000924!5.48e-22!102;UBERON:0006601!5.48e-22!102;UBERON:0000955!1.26e-21!50;UBERON:0006238!1.26e-21!50;UBERON:0002616!5.34e-21!49;UBERON:0003056!1.30e-20!49;UBERON:0002020!4.13e-20!34;UBERON:0003080!1.27e-17!40;UBERON:0002791!1.85e-17!29;UBERON:0003528!1.85e-17!29;UBERON:0001893!1.85e-17!29;UBERON:0002780!5.22e-17!39;UBERON:0001890!5.22e-17!39;UBERON:0006240!5.22e-17!39;UBERON:0000956!1.20e-12!21;UBERON:0001869!1.20e-12!21;UBERON:0000203!1.20e-12!21;UBERON:0007811!1.79e-11!86;UBERON:0000153!4.17e-11!94;UBERON:0002619!7.61e-10!17;UBERON:0002021!2.21e-09!10;UBERON:0000411!2.21e-09!10;UBERON:0001950!2.21e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.89e-32,54;UBERON:0002020,5.84e-31,34;UBERON:0001049,1.32e-29,52;UBERON:0005068,1.32e-29,52;UBERON:0006241,1.32e-29,52;UBERON:0007135,1.32e-29,52;UBERON:0002346,4.14e-29,64;UBERON:0003075,4.14e-29,64;UBERON:0007284,4.14e-29,64;UBERON:0001017,9.41e-28,73;UBERON:0003528,6.96e-27,29;UBERON:0002791,6.96e-27,29;UBERON:0001893,6.96e-27,29;UBERON:0001016,1.42e-26,75;UBERON:0000955,2.52e-25,47;UBERON:0006238,2.52e-25,47;UBERON:0002616,2.04e-24,46;UBERON:0010371,1.36e-23,73;UBERON:0004121,1.25e-22,95;UBERON:0000924,1.25e-22,95;UBERON:0006601,1.25e-22,95;UBERON:0003056,4.19e-22,49;UBERON:0003080,9.22e-22,40;UBERON:0002780,7.31e-21,39;UBERON:0001890,7.31e-21,39;UBERON:0006240,7.31e-21,39;UBERON:0000956,1.80e-19,21;UBERON:0001869,1.80e-19,21;UBERON:0000203,1.80e-19,21;UBERON:0010314,1.31e-15,92;UBERON:0002619,3.84e-15,17;UBERON:0002021,1.54e-13,10;UBERON:0000411,1.54e-13,10;UBERON:0001950,1.54e-13,10;UBERON:0002420,1.92e-08,8;UBERON:0007245,1.92e-08,8;UBERON:0010009,1.92e-08,8;UBERON:0010011,1.92e-08,8;UBERON:0000454,1.92e-08,8;UBERON:0003076,3.23e-08,12;UBERON:0003057,3.23e-08,12|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.5088736604011,11.1088105647127,6.33831403506179,0,0,0,0,0,0,0.384218305321555,15.0349937847293,14.9856591548177,14.302097371894,3.14216082844184,4.19650227808066,10.1667363348412,9.39285615978716,7.35375029288017,20.9220173898839,13.6625451751151,16.2822925251618,8.83638127792299,7.04454855738554,5.73004707612436,12.8424179540635,11.8180148106653,12.6822545654752,5.59794312399969,4.6982654663704,7.82877672466262,0.227178579999552,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0.520455980298408,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,21.958559775866,18.850203613211,0,0,0,0,10.4853447583376,15.0975198930147,9.5497307605777,30.0716073932638,15.8543583544805,14.7529511637288,13.1415423084884,0.305518091550949,0,0,12.2056276414155,0.390361328888111,0.229902104433473,0.720248519221397,1.05493372485001,1.83698547708585,1.0249097622788,0.749613796477831,12.9351685369508,0,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.164167464079095,0,0,0,0.134206418760372,13.6688466566683,12.9659811597898,0,0,0,0.464473343720877,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.379335801906163,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,15.8945084087914,14.0654023910644,0,0,0.631016438832513,1.17131623288992,0.430846795465598,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,9.96096080907602,0.141940085208269,0.178065603667255,0.488660878060728,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0,0.709360934569094,0.178368817602071,0.329098041204242,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,14.4631735568198,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.216010681643603,0.209088296014469,0.655087691238533,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.337912250981556,0,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0.214368379079066,0,24.2843292325339,36.365693684067,26.9260891316516,21.1379414282736,40.4198686664679,55.8991484068378,35.7761925122857,49.9856535578885,40.7828168085784,43.4918661871529,0.726511433089237,1.99512436700516,1.36586884603307,1.94485373654635,1.25767897576789,2.20612210140017,2.00022055021454,2.67845574410562,2.24643446714271,1.51618327058278,1.77435509923168,2.64076877940507,2.34103768674706,2.62503124859964,2.35485422718014,2.38146845641537,2.43357084484197,1.73618298417335,0,1.61918812147837,2.40008476669791,1.4198064492747,1.90748951957857,1.30811774969096,2.82328141245992,1.69229215783353,1.82927972872773,2.36762740294059,2.17286582153379,1.68342681497322,1.42362021749009,1.87158516513571,0,2.01417893541756,1.54325288784913,4.99621155875892,3.27504251823572,1.50409737833809,0.57386499620653,0,0|short_description=p2@Pak7}} | ||
|EntrezGene=241656 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8C015,B1AYC2,Q4KL59 | |||
|association_with_transcript=0bp_to_ENSMUST00000035264,ENSMUST00000077200,ENSMUST00000143329,NM_172858,uc008moh.1,uc008moi.1,uc008moj.1_5end | |||
|description=CAGE_peak_2_at_Pak7_5end | |||
|id=chr2:136213665..136213721,- | |||
|ontology_enrichment_celltype=CL:0000117!1.14e-14!23;CL:0000337!1.14e-14!23;CL:0000540!1.46e-13!33;CL:0000047!1.46e-13!33;CL:0000031!1.46e-13!33;CL:0000404!1.46e-13!33;CL:0000393!1.91e-09!39;CL:0000211!1.91e-09!39;CL:0002319!1.22e-08!43;CL:0000221!1.34e-08!44;CL:0000133!1.34e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.21e-21,23;CL:0000337,1.21e-21,23;CL:0000540,8.14e-14,33;CL:0000047,8.14e-14,33;CL:0000031,8.14e-14,33;CL:0000404,8.14e-14,33;CL:0000393,1.54e-10,39;CL:0000211,1.54e-10,39;CL:0002319,6.79e-09,43;CL:0000221,1.55e-08,44;CL:0000133,1.55e-08,44;CL:0002609,4.90e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.12e-25!71;UBERON:0003075!4.12e-25!71;UBERON:0007284!4.12e-25!71;UBERON:0001017!8.52e-25!73;UBERON:0005743!8.52e-25!73;UBERON:0000073!3.78e-24!75;UBERON:0001016!3.78e-24!75;UBERON:0000033!2.73e-23!63;UBERON:0001049!2.74e-22!52;UBERON:0005068!2.74e-22!52;UBERON:0006241!2.74e-22!52;UBERON:0007135!2.74e-22!52;UBERON:0004121!5.48e-22!102;UBERON:0000924!5.48e-22!102;UBERON:0006601!5.48e-22!102;UBERON:0000955!1.26e-21!50;UBERON:0006238!1.26e-21!50;UBERON:0002616!5.34e-21!49;UBERON:0003056!1.30e-20!49;UBERON:0002020!4.13e-20!34;UBERON:0003080!1.27e-17!40;UBERON:0002791!1.85e-17!29;UBERON:0003528!1.85e-17!29;UBERON:0001893!1.85e-17!29;UBERON:0002780!5.22e-17!39;UBERON:0001890!5.22e-17!39;UBERON:0006240!5.22e-17!39;UBERON:0000956!1.20e-12!21;UBERON:0001869!1.20e-12!21;UBERON:0000203!1.20e-12!21;UBERON:0007811!1.79e-11!86;UBERON:0000153!4.17e-11!94;UBERON:0002619!7.61e-10!17;UBERON:0002021!2.21e-09!10;UBERON:0000411!2.21e-09!10;UBERON:0001950!2.21e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.89e-32,54;UBERON:0002020,5.84e-31,34;UBERON:0001049,1.32e-29,52;UBERON:0005068,1.32e-29,52;UBERON:0006241,1.32e-29,52;UBERON:0007135,1.32e-29,52;UBERON:0002346,4.14e-29,64;UBERON:0003075,4.14e-29,64;UBERON:0007284,4.14e-29,64;UBERON:0001017,9.41e-28,73;UBERON:0003528,6.96e-27,29;UBERON:0002791,6.96e-27,29;UBERON:0001893,6.96e-27,29;UBERON:0001016,1.42e-26,75;UBERON:0000955,2.52e-25,47;UBERON:0006238,2.52e-25,47;UBERON:0002616,2.04e-24,46;UBERON:0010371,1.36e-23,73;UBERON:0004121,1.25e-22,95;UBERON:0000924,1.25e-22,95;UBERON:0006601,1.25e-22,95;UBERON:0003056,4.19e-22,49;UBERON:0003080,9.22e-22,40;UBERON:0002780,7.31e-21,39;UBERON:0001890,7.31e-21,39;UBERON:0006240,7.31e-21,39;UBERON:0000956,1.80e-19,21;UBERON:0001869,1.80e-19,21;UBERON:0000203,1.80e-19,21;UBERON:0010314,1.31e-15,92;UBERON:0002619,3.84e-15,17;UBERON:0002021,1.54e-13,10;UBERON:0000411,1.54e-13,10;UBERON:0001950,1.54e-13,10;UBERON:0002420,1.92e-08,8;UBERON:0007245,1.92e-08,8;UBERON:0010009,1.92e-08,8;UBERON:0010011,1.92e-08,8;UBERON:0000454,1.92e-08,8;UBERON:0003076,3.23e-08,12;UBERON:0003057,3.23e-08,12 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.5088736604011,11.1088105647127,6.33831403506179,0,0,0,0,0,0,0.384218305321555,15.0349937847293,14.9856591548177,14.302097371894,3.14216082844184,4.19650227808066,10.1667363348412,9.39285615978716,7.35375029288017,20.9220173898839,13.6625451751151,16.2822925251618,8.83638127792299,7.04454855738554,5.73004707612436,12.8424179540635,11.8180148106653,12.6822545654752,5.59794312399969,4.6982654663704,7.82877672466262,0.227178579999552,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0.520455980298408,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,21.958559775866,18.850203613211,0,0,0,0,10.4853447583376,15.0975198930147,9.5497307605777,30.0716073932638,15.8543583544805,14.7529511637288,13.1415423084884,0.305518091550949,0,0,12.2056276414155,0.390361328888111,0.229902104433473,0.720248519221397,1.05493372485001,1.83698547708585,1.0249097622788,0.749613796477831,12.9351685369508,0,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.164167464079095,0,0,0,0.134206418760372,13.6688466566683,12.9659811597898,0,0,0,0.464473343720877,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.379335801906163,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,15.8945084087914,14.0654023910644,0,0,0.631016438832513,1.17131623288992,0.430846795465598,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,9.96096080907602,0.141940085208269,0.178065603667255,0.488660878060728,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0,0.709360934569094,0.178368817602071,0.329098041204242,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,14.4631735568198,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.216010681643603,0.209088296014469,0.655087691238533,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.337912250981556,0,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0.214368379079066,0,24.2843292325339,36.365693684067,26.9260891316516,21.1379414282736,40.4198686664679,55.8991484068378,35.7761925122857,49.9856535578885,40.7828168085784,43.4918661871529,0.726511433089237,1.99512436700516,1.36586884603307,1.94485373654635,1.25767897576789,2.20612210140017,2.00022055021454,2.67845574410562,2.24643446714271,1.51618327058278,1.77435509923168,2.64076877940507,2.34103768674706,2.62503124859964,2.35485422718014,2.38146845641537,2.43357084484197,1.73618298417335,0,1.61918812147837,2.40008476669791,1.4198064492747,1.90748951957857,1.30811774969096,2.82328141245992,1.69229215783353,1.82927972872773,2.36762740294059,2.17286582153379,1.68342681497322,1.42362021749009,1.87158516513571,0,2.01417893541756,1.54325288784913,4.99621155875892,3.27504251823572,1.50409737833809,0.57386499620653,0,0 | |||
|short_description=p2@Pak7 | |||
}} |
Revision as of 22:12, 13 September 2013
Short description: | p2@Pak7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pak7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000035264, ENSMUST00000077200, ENSMUST00000143329, NM_172858, uc008moh.1, uc008moi.1, uc008moj.1_5end |
EntrezGene: | Pak7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.21e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.21e-21 | 23 |
neuron | 8.14e-14 | 33 |
neuronal stem cell | 8.14e-14 | 33 |
neuroblast | 8.14e-14 | 33 |
electrically signaling cell | 8.14e-14 | 33 |
electrically responsive cell | 1.54e-10 | 39 |
electrically active cell | 1.54e-10 | 39 |
neural cell | 6.79e-09 | 43 |
ectodermal cell | 1.55e-08 | 44 |
neurectodermal cell | 1.55e-08 | 44 |
neuron of cerebral cortex | 4.90e-07 | 6 |
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