FFCP PHASE1:Hg19::chr1:220701456..220701574,+: Difference between revisions
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{{FFCP | 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9375634,4.13529239111356,7.47711500493495,2.49852889812322,45.352700405837,10.9397410231864,0,18.9887460944094,5.04602211744995,10.0337708206016,0.788857810965923,31.5480514485844,130.468856411773,11.6385904913388,1.48798007266701,3.69740502905135,0,20.9436265226231,25.13108155165,2.28057301820587,13.7684920151675,19.2396531791204,22.3304605869673,6.51839602160175,18.1868875723775,14.7380271585898,13.2667110313405,12.7222584910131,12.3675709502569,17.8548323597805,1.74390056557216,5.64879900092307,3.13969215225718,11.7747242814605,15.9672579276993,13.4984383696116,10.2669990325584,8.14959841476509,13.4120524084305,17.6309988969387,16.4434602594168,6.61709544441836,0,0.269475606319761,28.1569130884145,16.9915607414184,16.6827433109453,36.6166225802032,12.2777014090526,3.8468219076388|short_description=p1@MARK1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4139 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6896 | |||
|TSSclassifier=S | |||
|UniProt=Q9P0L2 | |||
|association_with_transcript=0bp_to_ENST00000366918,ENST00000402574,NM_018650,uc001hml.2,uc001hmm.3,uc001hmn.3,uc009xdw.2,uc010pun.1_5end | |||
|coexpression_cluster_id=C2567 | |||
|description=CAGE_peak_1_at_MARK1_5end | |||
|id=chr1:220701456..220701574,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.62e-12!71;CL:0000133!4.14e-09!59;CL:0000066!1.22e-08!254;CL:0002319!5.01e-08!25;CL:0002077!8.46e-08!33 | |||
|ontology_enrichment_celltype_v019=CL:0002319;5.14e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.57e-12,72;CL:0000133,2.35e-09,59;CL:0002319,3.24e-08,25;CL:0000066,5.35e-08,253;CL:0002077,2.66e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.40e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@MARK1 | |||
}} |
Revision as of 03:43, 12 September 2013
Short description: | p1@MARK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MARK1_5end |
Coexpression cluster: | C2567_merkel_neuroblastoma_parietal_occipital_duodenum_temporal_brain |
Association with transcript: | 0bp_to_ENST00000366918, ENST00000402574, NM_018650, uc001hml.2, uc001hmm.3, uc001hmn.3, uc009xdw.2, uc010pun.1_5end |
EntrezGene: | MARK1 |
HGNC: | 6896 |
UniProt: | Q9P0L2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.57e-12 | 72 |
neurectodermal cell | 2.35e-09 | 59 |
neural cell | 3.24e-08 | 25 |
epithelial cell | 5.35e-08 | 253 |
ecto-epithelial cell | 2.66e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.