FFCP PHASE1:Hg19::chr2:39892216..39892229,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=130733|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28517|TSSclassifier=S|UniProt=|association_with_transcript=94bp_to_ENST00000437068_5end|coexpression_cluster_id=C3012|description=CAGE_peak_17_at_TMEM178_5end|id=chr2:39892216..39892229,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;8.11e-28;3!UBERON:0006241;6.56e-08;3!UBERON:0003057;6.56e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.69e-90!57;UBERON:0005068!5.69e-90!57;UBERON:0006241!5.69e-90!57;UBERON:0007135!5.69e-90!57;UBERON:0002616!4.25e-76!59;UBERON:0000955!1.33e-67!69;UBERON:0006238!1.33e-67!69;UBERON:0002619!1.42e-65!22;UBERON:0001950!4.61e-64!20;UBERON:0001017!7.20e-64!82;UBERON:0002020!1.37e-62!34;UBERON:0003528!1.37e-62!34;UBERON:0001893!2.24e-62!34;UBERON:0002780!3.78e-61!41;UBERON:0001890!3.78e-61!41;UBERON:0006240!3.78e-61!41;UBERON:0005743!1.22e-60!86;UBERON:0001869!1.26e-60!32;UBERON:0003080!1.34e-59!42;UBERON:0002791!1.36e-58!33;UBERON:0003075!1.22e-57!86;UBERON:0007284!1.22e-57!86;UBERON:0000956!1.60e-57!25;UBERON:0000203!1.60e-57!25;UBERON:0002346!8.54e-55!90;UBERON:0000073!2.38e-54!94;UBERON:0001016!2.38e-54!94;UBERON:0007023!1.33e-47!115;UBERON:0003056!1.24e-39!61;UBERON:0000033!5.94e-38!123;UBERON:0000153!6.90e-36!129;UBERON:0007811!6.90e-36!129;UBERON:0003076!1.22e-30!15;UBERON:0003057!1.22e-30!15;UBERON:0000200!1.55e-29!6;UBERON:0004121!1.70e-27!169;UBERON:0000924!1.05e-26!173;UBERON:0006601!1.05e-26!173;UBERON:0004733!1.17e-24!12;UBERON:0002028!1.17e-24!12;UBERON:0007277!1.17e-24!12;UBERON:0004732!1.15e-22!13;UBERON:0001871!4.47e-22!7;UBERON:0000025!9.33e-22!194;UBERON:0002298!9.76e-21!8;UBERON:0001872!3.66e-16!5;UBERON:0004111!3.96e-16!241;UBERON:0002771!6.31e-16!3;UBERON:0002021!1.52e-15!5;UBERON:0001896!4.07e-15!3;UBERON:0005290!4.07e-15!3;UBERON:0010096!4.07e-15!3;UBERON:0000988!1.79e-14!3;UBERON:0000477!1.46e-13!286;UBERON:0000475!1.75e-13!365;UBERON:0002680!2.26e-13!9;UBERON:0001895!2.26e-13!9;UBERON:0010092!2.26e-13!9;UBERON:0000064!2.47e-13!219;UBERON:0000483!6.08e-12!309;UBERON:0000119!9.32e-12!312;UBERON:0001870!3.87e-11!2;UBERON:0000481!1.28e-10!347;UBERON:0002148!2.25e-10!2;UBERON:0009662!2.25e-10!2;UBERON:0000349!1.26e-09!5;UBERON:0002308!1.69e-08!9;UBERON:0000125!1.69e-08!9;UBERON:0000062!4.54e-08!511;UBERON:0002240!1.26e-07!3;UBERON:0006331!3.42e-07!3|ontology_enrichment_uberon_v019=UBERON:0002771;3.00e-40;2!UBERON:0002619;9.85e-31;22!UBERON:0000200;3.57e-30;6!UBERON:0000956;3.35e-27;25!UBERON:0000203;3.35e-27;25!UBERON:0001871;5.53e-26;6!UBERON:0001950;1.34e-23;20!UBERON:0003112;4.66e-21;1!UBERON:0011158;4.66e-21;1!UBERON:0003128;4.66e-21;1!UBERON:0001703;4.66e-21;1!UBERON:0002241;4.66e-21;1!UBERON:0002791;1.60e-19;32!UBERON:0001869;1.60e-19;32!UBERON:0003528;2.17e-19;34!UBERON:0002020;2.17e-19;34!UBERON:0000073;3.92e-18;53!UBERON:0002616;3.92e-18;53!UBERON:0001893;4.03e-17;34!UBERON:0000349;8.81e-17;5!UBERON:0002037;1.90e-14;6!UBERON:0002780;1.14e-13;41!UBERON:0001890;1.14e-13;41!UBERON:0001876;3.18e-11;2!UBERON:0001954;3.18e-11;2!UBERON:0002702;3.18e-11;2!UBERON:0003022;3.18e-11;2!UBERON:0002421;3.18e-11;2!UBERON:0002600;3.18e-11;2!UBERON:0000955;3.86e-11;68!UBERON:0001017;7.86e-11;75!UBERON:0002680;5.93e-10;9!UBERON:0001895;5.93e-10;9!UBERON:0001016;1.21e-09;83!UBERON:0001870;6.56e-08;3!UBERON:0002240;6.56e-08;3!UBERON:0005174;6.56e-08;3!UBERON:0001137;6.56e-08;3!UBERON:0004733;1.09e-07;12!UBERON:0002028;1.09e-07;12!UBERON:0004732;3.65e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0002771,8.18e-40,2;UBERON:0002619,1.04e-30,22;UBERON:0000200,4.59e-30,6;UBERON:0001049,9.51e-28,56;UBERON:0005068,9.51e-28,56;UBERON:0006241,9.51e-28,56;UBERON:0007135,9.51e-28,56;UBERON:0000956,3.51e-27,25;UBERON:0000203,3.51e-27,25;UBERON:0001871,8.85e-26,6;UBERON:0001950,1.44e-23,20;UBERON:0000073,3.84e-23,53;UBERON:0002616,3.84e-23,53;UBERON:0002791,1.96e-21,32;UBERON:0001869,1.96e-21,32;UBERON:0003112,7.72e-21,1;UBERON:0011158,7.72e-21,1;UBERON:0003128,7.72e-21,1;UBERON:0001703,7.72e-21,1;UBERON:0002241,7.72e-21,1;UBERON:0004761,7.72e-21,1;UBERON:0009617,7.72e-21,1;UBERON:0003528,3.27e-20,34;UBERON:0002020,3.27e-20,34;UBERON:0001893,3.27e-20,34;UBERON:0001017,5.75e-19,81;UBERON:0003075,5.75e-19,82;UBERON:0007284,5.75e-19,82;UBERON:0002346,4.44e-18,86;UBERON:0000955,8.49e-18,68;UBERON:0006238,8.49e-18,68;UBERON:0001016,4.46e-17,89;UBERON:0007023,5.86e-17,114;UBERON:0002780,7.56e-17,41;UBERON:0001890,7.56e-17,41;UBERON:0003080,7.56e-17,41;UBERON:0006240,7.56e-17,41;UBERON:0000349,8.82e-17,5;UBERON:0010371,6.45e-15,104;UBERON:0010314,1.77e-14,132;UBERON:0002037,1.90e-14,6;UBERON:0006215,1.90e-14,6;UBERON:0003076,9.45e-13,15;UBERON:0003057,9.45e-13,15;UBERON:0003056,2.12e-11,61;UBERON:0002702,2.47e-11,2;UBERON:0001954,3.02e-11,2;UBERON:0003022,3.02e-11,2;UBERON:0002421,3.02e-11,2;UBERON:0002600,3.02e-11,2;UBERON:0001876,3.35e-11,2;UBERON:0005253,4.09e-11,2;UBERON:0002680,5.93e-10,9;UBERON:0001895,5.93e-10,9;UBERON:0010092,5.93e-10,9;UBERON:0004121,8.15e-09,171;UBERON:0000924,8.15e-09,171;UBERON:0006601,8.15e-09,171;UBERON:0011216,2.87e-08,223;UBERON:0002240,5.18e-08,3;UBERON:0005174,5.18e-08,3;UBERON:0001137,5.18e-08,3;UBERON:0001870,5.54e-08,3;UBERON:0000025,6.82e-08,192;UBERON:0004733,1.09e-07,12;UBERON:0002028,1.09e-07,12;UBERON:0007277,1.09e-07,12;UBERON:0004732,3.65e-07,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,3.64911557773041,2.36438095162838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49823746722733,0,0,0,0,0,0.728994679896296,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.09823638411767,0.876336514945499,0.573409195690071,0.443716206147409,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.798169295285756,0.41023272848151,0.252071696221718,0.138314504928436,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0.781078098613847,1.65349437200947,0.380494861163441,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.526182188502793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,1.78227840196252,0,0,0,0,0,0,0,0,0,0,0,0,0.747906392100062,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p17@TMEM178}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=130733 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28517 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=94bp_to_ENST00000437068_5end | |||
|coexpression_cluster_id=C3012 | |||
|description=CAGE_peak_17_at_TMEM178_5end | |||
|id=chr2:39892216..39892229,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.11e-28;3!UBERON:0006241;6.56e-08;3!UBERON:0003057;6.56e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p17@TMEM178 | |||
}} |
Revision as of 18:33, 12 September 2013
Short description: | p17@TMEM178 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_TMEM178_5end |
Coexpression cluster: | C3012_cerebellum_medulla_amygdala_hippocampus_occipital_middle_parietal |
Association with transcript: | 94bp_to_ENST00000437068_5end |
EntrezGene: | TMEM178 |
HGNC: | 28517 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.