FFCP PHASE1:Hg19::chr2:105470599..105470610,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5455|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C919|description=CAGE_peak_6_at_POU3F3_5end|id=chr2:105470599..105470610,+|ontology_enrichment_celltype=CL:0000128!3.79e-09!7;CL:0000126!3.79e-09!7;CL:0000127!3.79e-09!7;CL:0002453!3.79e-09!7;CL:0002319!9.77e-09!25;CL:1000507!1.83e-07!12;CL:1000494!1.83e-07!12|ontology_enrichment_celltype_v019=CL:0000128;9.71e-13;7!CL:0000126;9.71e-13;7!CL:0000127;9.71e-13;7!CL:0002319;7.33e-10;25!CL:0002605;9.94e-09;3!CL:0002603;5.95e-08;3!CL:1000507;1.01e-07;10!CL:1000494;1.01e-07;10!CL:0000239;2.12e-07;3!CL:1000615;2.12e-07;3!CL:0002306;2.12e-07;3!CL:0000047;5.62e-07;2|ontology_enrichment_celltype_v019_2=CL:0000128,8.30e-13,7;CL:0000126,8.30e-13,7;CL:0000127,8.30e-13,7;CL:0002453,8.30e-13,7;CL:0002319,7.07e-10,25;CL:0000047,4.78e-09,8;CL:0002605,8.19e-09,3;CL:0002603,5.96e-08,3;CL:1000507,9.75e-08,10;CL:1000494,9.75e-08,10;CL:0000239,2.00e-07,3;CL:1000615,2.00e-07,3;CL:0002306,2.00e-07,3|ontology_enrichment_development_v019=UBERON:0006601;3.49e-13;82!UBERON:0006241;9.49e-08;3!UBERON:0003057;9.49e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.14e-73!57;UBERON:0005068!3.14e-73!57;UBERON:0006241!3.14e-73!57;UBERON:0007135!3.14e-73!57;UBERON:0001017!1.08e-71!82;UBERON:0005743!1.17e-69!86;UBERON:0000073!1.46e-65!94;UBERON:0001016!1.46e-65!94;UBERON:0002616!4.46e-64!59;UBERON:0000955!2.50e-59!69;UBERON:0006238!2.50e-59!69;UBERON:0003075!6.84e-57!86;UBERON:0007284!6.84e-57!86;UBERON:0001893!2.46e-54!34;UBERON:0002020!7.80e-54!34;UBERON:0003528!7.80e-54!34;UBERON:0002346!1.52e-53!90;UBERON:0002791!1.30e-52!33;UBERON:0002780!2.38e-52!41;UBERON:0001890!2.38e-52!41;UBERON:0006240!2.38e-52!41;UBERON:0003080!7.93e-51!42;UBERON:0001869!1.13e-50!32;UBERON:0000153!5.13e-44!129;UBERON:0007811!5.13e-44!129;UBERON:0004121!9.73e-43!169;UBERON:0000033!1.07e-42!123;UBERON:0000924!3.07e-41!173;UBERON:0006601!3.07e-41!173;UBERON:0003056!3.09e-41!61;UBERON:0000956!5.83e-40!25;UBERON:0000203!5.83e-40!25;UBERON:0007023!1.58e-38!115;UBERON:0002619!5.59e-35!22;UBERON:0001950!7.54e-32!20;UBERON:0003076!1.11e-22!15;UBERON:0003057!1.11e-22!15;UBERON:0000064!9.07e-21!219;UBERON:0004732!6.10e-20!13;UBERON:0000025!1.71e-19!194;UBERON:0004733!1.61e-18!12;UBERON:0002028!1.61e-18!12;UBERON:0007277!1.61e-18!12;UBERON:0000475!1.78e-17!365;UBERON:0004111!3.76e-17!241;UBERON:0000477!7.29e-16!286;UBERON:0002420!3.47e-15!9;UBERON:0007245!3.47e-15!9;UBERON:0010009!3.47e-15!9;UBERON:0010011!3.47e-15!9;UBERON:0000454!3.47e-15!9;UBERON:0002308!4.96e-15!9;UBERON:0000125!4.96e-15!9;UBERON:0002680!2.56e-14!9;UBERON:0001895!2.56e-14!9;UBERON:0010092!2.56e-14!9;UBERON:0000483!1.17e-13!309;UBERON:0000119!2.48e-13!312;UBERON:0009663!4.16e-12!7;UBERON:0000489!4.40e-11!32;UBERON:0001871!5.72e-11!7;UBERON:0000200!9.27e-11!6;UBERON:0002298!1.75e-10!8;UBERON:0000062!2.05e-10!511;UBERON:0000481!2.72e-10!347;UBERON:0002021!4.07e-10!5;UBERON:0002037!9.35e-10!6;UBERON:0006215!9.35e-10!6;UBERON:0001872!1.00e-09!5;UBERON:0000349!2.87e-09!5;UBERON:0002113!4.53e-09!27;UBERON:0003918!4.53e-09!27;UBERON:0005095!4.53e-09!27;UBERON:0007687!4.53e-09!27;UBERON:0000922!2.63e-08!612;UBERON:0000923!7.18e-08!604;UBERON:0005291!7.18e-08!604;UBERON:0006598!7.18e-08!604;UBERON:0002532!7.18e-08!604;UBERON:0002050!8.18e-08!605;UBERON:0005423!8.18e-08!605;UBERON:0004876!1.06e-07!20;UBERON:0009773!1.83e-07!12;UBERON:0001231!1.83e-07!12;UBERON:0004810!1.83e-07!12;UBERON:0000369!2.34e-07!4;UBERON:0002435!2.34e-07!4;UBERON:0000204!2.34e-07!4;UBERON:0010082!2.34e-07!4;UBERON:0000080!2.55e-07!18;UBERON:0002120!2.55e-07!18;UBERON:0004875!2.55e-07!18;UBERON:0005721!2.55e-07!18;UBERON:0005754!2.55e-07!18;UBERON:0007297!2.55e-07!18;UBERON:0000467!3.85e-07!625;UBERON:0000480!4.36e-07!626|ontology_enrichment_uberon_v019=UBERON:0001893;2.56e-64;34!UBERON:0003528;2.86e-62;34!UBERON:0002020;2.86e-62;34!UBERON:0002791;3.90e-62;32!UBERON:0001869;4.20e-62;32!UBERON:0000956;1.74e-53;25!UBERON:0000203;1.74e-53;25!UBERON:0002780;4.94e-52;41!UBERON:0001890;4.94e-52;41!UBERON:0000073;1.69e-49;53!UBERON:0002616;1.69e-49;53!UBERON:0002619;2.52e-46;22!UBERON:0001950;9.59e-42;20!UBERON:0001017;1.36e-33;75!UBERON:0000955;4.12e-32;68!UBERON:0001016;1.02e-29;83!UBERON:0002420;1.96e-21;9!UBERON:0007245;1.96e-21;9!UBERON:0010009;1.96e-21;9!UBERON:0010011;1.96e-21;9!UBERON:0000454;1.96e-21;9!UBERON:0000125;2.95e-21;9!UBERON:0002308;2.95e-21;9!UBERON:0004732;1.24e-20;13!UBERON:0004733;1.15e-18;12!UBERON:0002028;1.15e-18;12!UBERON:0009663;4.78e-17;7!UBERON:0002680;3.29e-16;9!UBERON:0001895;3.29e-16;9!UBERON:0002021;6.19e-14;5!UBERON:0001872;1.51e-13;5!UBERON:0001871;5.28e-13;6!UBERON:0007023;6.16e-13;114!UBERON:0000349;8.17e-13;5!UBERON:0000200;6.17e-11;6!UBERON:0002298;1.56e-10;6!UBERON:0000369;4.02e-10;4!UBERON:0002435;4.02e-10;4!UBERON:0000204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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5455 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C919 | |||
|description=CAGE_peak_6_at_POU3F3_5end | |||
|id=chr2:105470599..105470610,+ | |||
|ontology_enrichment_celltype=CL:0000128!3.79e-09!7;CL:0000126!3.79e-09!7;CL:0000127!3.79e-09!7;CL:0002453!3.79e-09!7;CL:0002319!9.77e-09!25;CL:1000507!1.83e-07!12;CL:1000494!1.83e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000128;9.71e-13;7!CL:0000126;9.71e-13;7!CL:0000127;9.71e-13;7!CL:0002319;7.33e-10;25!CL:0002605;9.94e-09;3!CL:0002603;5.95e-08;3!CL:1000507;1.01e-07;10!CL:1000494;1.01e-07;10!CL:0000239;2.12e-07;3!CL:1000615;2.12e-07;3!CL:0002306;2.12e-07;3!CL:0000047;5.62e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,8.30e-13,7;CL:0000126,8.30e-13,7;CL:0000127,8.30e-13,7;CL:0002453,8.30e-13,7;CL:0002319,7.07e-10,25;CL:0000047,4.78e-09,8;CL:0002605,8.19e-09,3;CL:0002603,5.96e-08,3;CL:1000507,9.75e-08,10;CL:1000494,9.75e-08,10;CL:0000239,2.00e-07,3;CL:1000615,2.00e-07,3;CL:0002306,2.00e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.49e-13;82!UBERON:0006241;9.49e-08;3!UBERON:0003057;9.49e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;2.56e-64;34!UBERON:0003528;2.86e-62;34!UBERON:0002020;2.86e-62;34!UBERON:0002791;3.90e-62;32!UBERON:0001869;4.20e-62;32!UBERON:0000956;1.74e-53;25!UBERON:0000203;1.74e-53;25!UBERON:0002780;4.94e-52;41!UBERON:0001890;4.94e-52;41!UBERON:0000073;1.69e-49;53!UBERON:0002616;1.69e-49;53!UBERON:0002619;2.52e-46;22!UBERON:0001950;9.59e-42;20!UBERON:0001017;1.36e-33;75!UBERON:0000955;4.12e-32;68!UBERON:0001016;1.02e-29;83!UBERON:0002420;1.96e-21;9!UBERON:0007245;1.96e-21;9!UBERON:0010009;1.96e-21;9!UBERON:0010011;1.96e-21;9!UBERON:0000454;1.96e-21;9!UBERON:0000125;2.95e-21;9!UBERON:0002308;2.95e-21;9!UBERON:0004732;1.24e-20;13!UBERON:0004733;1.15e-18;12!UBERON:0002028;1.15e-18;12!UBERON:0009663;4.78e-17;7!UBERON:0002680;3.29e-16;9!UBERON:0001895;3.29e-16;9!UBERON:0002021;6.19e-14;5!UBERON:0001872;1.51e-13;5!UBERON:0001871;5.28e-13;6!UBERON:0007023;6.16e-13;114!UBERON:0000349;8.17e-13;5!UBERON:0000200;6.17e-11;6!UBERON:0002298;1.56e-10;6!UBERON:0000369;4.02e-10;4!UBERON:0002435;4.02e-10;4!UBERON:0000204;4.02e-10;4!UBERON:0011216;4.20e-10;132!UBERON:0002037;8.41e-10;6!UBERON:0000489;2.37e-09;29!UBERON:0000988;2.74e-08;3!UBERON:0006947;2.96e-08;3!UBERON:0004054;2.96e-08;3!UBERON:0010314;5.62e-08;132!UBERON:0005383;6.65e-08;3!UBERON:0005382;6.65e-08;3!UBERON:0002240;9.49e-08;3!UBERON:0005174;9.49e-08;3!UBERON:0001137;9.49e-08;3!UBERON:0004211;1.01e-07;10!UBERON:0009773;1.01e-07;10!UBERON:0001231;1.01e-07;10!UBERON:0004810;1.01e-07;10!UBERON:0006853;2.12e-07;3!UBERON:0007685;2.12e-07;3!UBERON:0004134;2.12e-07;3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20114750999649,1.22400414746552,3.76145665773705,10.8769675109802,3.69560947696787,3.64073654824928,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.597794722207204,0,0,0,0.816616685019573,0.245668634623536,0.309977343527296,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0.651616610620649,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.40150109623115,19.5209780786433,12.3726210044431,15.0764638800914,5.10351001322531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,1.46329140498388,0.784349769176855,2.92278449306521,2.00548094896464,0,0,0,0,0,0,2.80363900349542,1.66215201785745,1.34324852833307,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27683904259429,3.14941248220485,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,2.81338832821025,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,2.90799823828566,4.17456441728331,13.9729658600836,0,0,0,0,0,0,0.689486746482929,0,0.520874984799877,3.54296554325536,2.89431452700979,1.52581736317083,2.32216445855572,0.591095237907095,1.97446857438575,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,7.41412462787447,0,2.81117334870407,0,0,0,3.15667522279512,0,10.1004011338062,0.126373159256976,0,0.414752765588989,0,0,0,0,2.56148591426813,0,0,0,0,1.92199335066233,0,0,0,0,0,0,0,0,0,4.30513412499975,0,0,0,0,0,0,3.08870996151536,0,0,0,0,0,0,0,3.60252173225874,3.14882371451584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,5.5843396505746,0,0,0,0,0,4.00947073942963,0,4.01909107225911,5.71755010671479,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84422503995411,3.57028024705263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,2.19647276823534,4.256491644021,0.573409195690071,3.43880059764242,3.72578417648301,0,0,0,0,0,0.936669811613763,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87123621224846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.47317047000752,0,0,0,3.08300280463006,5.6678630530234,4.78901577171454,3.69209455633359,7.31007919042983,5.11763668235212,2.42213468447777,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38994300019565,3.12431239445539,5.1671699125296,4.05861185241004,3.82882366312754,0,0.496211178389294,0,0,0,0,0,0,0,0,0,4.35006291051723,5.06450356433938,0,0,0.078493092850514,2.04250266890802,0,0.913158720509496,0,3.8220135030964,0.142953088353313,0,0,0,0,0,0,0,0,0,0,5.92741870267301,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,3.53355240806901,2.67341760294377,1.2679671827502,0,0,0,0,0,0,0,0,0,5.73358332605805,0,4.6234213329822,5.23620828408453,0,0,0,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,0.530450887527676,0,4.1458471972939,4.65448481378528,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@POU3F3 | |||
}} |
Revision as of 12:49, 12 September 2013
Short description: | p6@POU3F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_POU3F3_5end |
Coexpression cluster: | C919_Neurons_Neural_parietal_Astrocyte_duodenum_occipital_temporal |
Association with transcript: | NA |
EntrezGene: | POU3F3 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 8.30e-13 | 7 |
macroglial cell | 8.30e-13 | 7 |
astrocyte | 8.30e-13 | 7 |
oligodendrocyte precursor cell | 8.30e-13 | 7 |
neural cell | 7.07e-10 | 25 |
neuronal stem cell | 4.78e-09 | 8 |
astrocyte of the cerebral cortex | 8.19e-09 | 3 |
astrocyte of the cerebellum | 5.96e-08 | 3 |
kidney tubule cell | 9.75e-08 | 10 |
nephron tubule epithelial cell | 9.75e-08 | 10 |
brush border epithelial cell | 2.00e-07 | 3 |
kidney cortex tubule cell | 2.00e-07 | 3 |
epithelial cell of proximal tubule | 2.00e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.