FFCP PHASE1:Hg19::chr4:156588447..156588458,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2982|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4685|TSSclassifier=S|UniProt=Q6PJR4|association_with_transcript=-31bp_to_ENST00000515201,uc003ipa.2_5end|description=CAGE_peak_12_at_GUCY1A3_5end|id=chr4:156588447..156588458,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000167;9.07e-08;1!CL:0000164;9.07e-08;1!CL:0000502;9.07e-08;1!CL:0000172;9.07e-08;1!CL:0000037;9.07e-08;1!CL:0001024;9.07e-08;1!CL:0000173;9.07e-08;1|ontology_enrichment_celltype_v019_2=CL:0000167,5.70e-08,1;CL:0000164,5.70e-08,1;CL:0000502,5.70e-08,1;CL:0000172,5.70e-08,1;CL:0000173,5.70e-08,1;CL:0002351,5.70e-08,1;CL:0001024,1.18e-07,1|ontology_enrichment_development_v019=UBERON:0010122;2.29e-14;2!UBERON:0008425;3.31e-08;1!CL:0002351;9.07e-08;1!UBERON:0004140;9.07e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4430;9.07e-08;1|ontology_enrichment_disease_v019_2=DOID:4430,5.70e-08,1|ontology_enrichment_uberon=UBERON:0007023!4.47e-43!115;UBERON:0001049!1.44e-34!57;UBERON:0005068!1.44e-34!57;UBERON:0006241!1.44e-34!57;UBERON:0007135!1.44e-34!57;UBERON:0003080!9.77e-31!42;UBERON:0002780!1.26e-29!41;UBERON:0001890!1.26e-29!41;UBERON:0006240!1.26e-29!41;UBERON:0002020!1.35e-29!34;UBERON:0003528!1.35e-29!34;UBERON:0001869!1.53e-29!32;UBERON:0002616!2.97e-29!59;UBERON:0001893!5.06e-29!34;UBERON:0002791!6.50e-28!33;UBERON:0001017!2.06e-25!82;UBERON:0003075!2.68e-25!86;UBERON:0007284!2.68e-25!86;UBERON:0000955!3.75e-25!69;UBERON:0006238!3.75e-25!69;UBERON:0002619!6.46e-25!22;UBERON:0005743!9.99e-25!86;UBERON:0002346!1.13e-24!90;UBERON:0000073!3.86e-24!94;UBERON:0001016!3.86e-24!94;UBERON:0001950!1.04e-22!20;UBERON:0000956!3.83e-21!25;UBERON:0000203!3.83e-21!25;UBERON:0003056!6.34e-20!61;UBERON:0004121!2.22e-14!169;UBERON:0000924!2.50e-14!173;UBERON:0006601!2.50e-14!173;UBERON:0000153!3.61e-14!129;UBERON:0007811!3.61e-14!129;UBERON:0000033!1.97e-12!123;UBERON:0001871!6.23e-10!7;UBERON:0002308!6.55e-10!9;UBERON:0000125!6.55e-10!9;UBERON:0002420!1.84e-09!9;UBERON:0007245!1.84e-09!9;UBERON:0010009!1.84e-09!9;UBERON:0010011!1.84e-09!9;UBERON:0000454!1.84e-09!9;UBERON:0000025!1.91e-09!194;UBERON:0000200!2.10e-08!6;UBERON:0001872!4.91e-08!5;UBERON:0000064!5.99e-08!219;UBERON:0004111!7.80e-08!241;UBERON:0009663!1.37e-07!7;UBERON:0000369!3.34e-07!4;UBERON:0002435!3.34e-07!4;UBERON:0000204!3.34e-07!4;UBERON:0010082!3.34e-07!4;UBERON:0000349!6.07e-07!5;UBERON:0000477!7.29e-07!286|ontology_enrichment_uberon_v019=UBERON:0000369;2.00e-26;4!UBERON:0002435;2.00e-26;4!UBERON:0000204;2.00e-26;4!UBERON:0000125;1.60e-25;9!UBERON:0002308;1.60e-25;9!UBERON:0009663;3.69e-23;7!UBERON:0003528;7.94e-23;34!UBERON:0002020;7.94e-23;34!UBERON:0001869;1.25e-21;32!UBERON:0002791;2.00e-21;32!UBERON:0005383;2.12e-20;3!UBERON:0005382;2.12e-20;3!UBERON:0001893;1.10e-18;34!UBERON:0002420;5.51e-18;9!UBERON:0007245;5.51e-18;9!UBERON:0010009;5.51e-18;9!UBERON:0010011;5.51e-18;9!UBERON:0000454;5.51e-18;9!UBERON:0001873;2.29e-14;2!UBERON:0002780;6.17e-14;41!UBERON:0001890;6.17e-14;41!UBERON:0001950;7.33e-11;20!UBERON:0002619;7.21e-10;22!UBERON:0001017;3.16e-09;75!UBERON:0000073;4.53e-09;53!UBERON:0002616;4.53e-09;53!UBERON:0000956;1.15e-08;25!UBERON:0000203;1.15e-08;25!UBERON:0000955;2.88e-08;68!UBERON:0001882;9.07e-08;1!UBERON:0001874;9.07e-08;1!UBERON:0002146;9.07e-08;1!UBERON:0005623;9.07e-08;1!UBERON:0005403;9.07e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0000369,8.07e-27,4;UBERON:0002435,8.07e-27,4;UBERON:0000204,8.07e-27,4;UBERON:0010082,8.07e-27,4;UBERON:0000125,1.49e-25,9;UBERON:0002308,1.49e-25,9;UBERON:0003528,1.33e-24,34;UBERON:0002020,1.33e-24,34;UBERON:0009663,2.14e-23,7;UBERON:0002791,4.32e-22,32;UBERON:0001869,4.32e-22,32;UBERON:0005383,4.65e-21,3;UBERON:0005382,4.65e-21,3;UBERON:0001893,1.03e-20,34;UBERON:0002420,3.62e-18,9;UBERON:0007245,3.62e-18,9;UBERON:0010009,3.62e-18,9;UBERON:0010011,3.62e-18,9;UBERON:0000454,3.62e-18,9;UBERON:0000073,6.55e-18,53;UBERON:0002616,6.55e-18,53;UBERON:0002780,6.30e-17,41;UBERON:0001890,6.30e-17,41;UBERON:0003080,6.30e-17,41;UBERON:0006240,6.30e-17,41;UBERON:0001049,7.79e-17,56;UBERON:0005068,7.79e-17,56;UBERON:0006241,7.79e-17,56;UBERON:0007135,7.79e-17,56;UBERON:0001873,1.03e-14,2;UBERON:0010122,1.03e-14,2;UBERON:0000955,3.06e-13,68;UBERON:0006238,3.06e-13,68;UBERON:0001017,1.25e-12,81;UBERON:0003075,1.33e-12,82;UBERON:0007284,1.33e-12,82;UBERON:0002346,6.73e-12,86;UBERON:0001016,3.98e-11,89;UBERON:0010371,5.44e-11,104;UBERON:0003056,8.06e-11,61;UBERON:0001950,8.34e-11,20;UBERON:0002619,8.10e-10,22;UBERON:0007023,8.50e-10,114;UBERON:0000956,1.28e-08,25;UBERON:0000203,1.28e-08,25;UBERON:0001874,4.35e-08,1;UBERON:0010314,5.02e-08,132;UBERON:0002146,1.26e-07,1;UBERON:0005623,1.26e-07,1;UBERON:0001882,1.64e-07,1;UBERON:0005403,1.64e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.656804715599566,0.472264687882075,0,0,0.154816123316076,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2982 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4685 | |||
|TSSclassifier=S | |||
|UniProt=Q6PJR4 | |||
|association_with_transcript=-31bp_to_ENST00000515201,uc003ipa.2_5end | |||
|description=CAGE_peak_12_at_GUCY1A3_5end | |||
|id=chr4:156588447..156588458,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;9.07e-08;1!CL:0000164;9.07e-08;1!CL:0000502;9.07e-08;1!CL:0000172;9.07e-08;1!CL:0000037;9.07e-08;1!CL:0001024;9.07e-08;1!CL:0000173;9.07e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,5.70e-08,1;CL:0000164,5.70e-08,1;CL:0000502,5.70e-08,1;CL:0000172,5.70e-08,1;CL:0000173,5.70e-08,1;CL:0002351,5.70e-08,1;CL:0001024,1.18e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.29e-14;2!UBERON:0008425;3.31e-08;1!CL:0002351;9.07e-08;1!UBERON:0004140;9.07e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;9.07e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,5.70e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.47e-43!115;UBERON:0001049!1.44e-34!57;UBERON:0005068!1.44e-34!57;UBERON:0006241!1.44e-34!57;UBERON:0007135!1.44e-34!57;UBERON:0003080!9.77e-31!42;UBERON:0002780!1.26e-29!41;UBERON:0001890!1.26e-29!41;UBERON:0006240!1.26e-29!41;UBERON:0002020!1.35e-29!34;UBERON:0003528!1.35e-29!34;UBERON:0001869!1.53e-29!32;UBERON:0002616!2.97e-29!59;UBERON:0001893!5.06e-29!34;UBERON:0002791!6.50e-28!33;UBERON:0001017!2.06e-25!82;UBERON:0003075!2.68e-25!86;UBERON:0007284!2.68e-25!86;UBERON:0000955!3.75e-25!69;UBERON:0006238!3.75e-25!69;UBERON:0002619!6.46e-25!22;UBERON:0005743!9.99e-25!86;UBERON:0002346!1.13e-24!90;UBERON:0000073!3.86e-24!94;UBERON:0001016!3.86e-24!94;UBERON:0001950!1.04e-22!20;UBERON:0000956!3.83e-21!25;UBERON:0000203!3.83e-21!25;UBERON:0003056!6.34e-20!61;UBERON:0004121!2.22e-14!169;UBERON:0000924!2.50e-14!173;UBERON:0006601!2.50e-14!173;UBERON:0000153!3.61e-14!129;UBERON:0007811!3.61e-14!129;UBERON:0000033!1.97e-12!123;UBERON:0001871!6.23e-10!7;UBERON:0002308!6.55e-10!9;UBERON:0000125!6.55e-10!9;UBERON:0002420!1.84e-09!9;UBERON:0007245!1.84e-09!9;UBERON:0010009!1.84e-09!9;UBERON:0010011!1.84e-09!9;UBERON:0000454!1.84e-09!9;UBERON:0000025!1.91e-09!194;UBERON:0000200!2.10e-08!6;UBERON:0001872!4.91e-08!5;UBERON:0000064!5.99e-08!219;UBERON:0004111!7.80e-08!241;UBERON:0009663!1.37e-07!7;UBERON:0000369!3.34e-07!4;UBERON:0002435!3.34e-07!4;UBERON:0000204!3.34e-07!4;UBERON:0010082!3.34e-07!4;UBERON:0000349!6.07e-07!5;UBERON:0000477!7.29e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;2.00e-26;4!UBERON:0002435;2.00e-26;4!UBERON:0000204;2.00e-26;4!UBERON:0000125;1.60e-25;9!UBERON:0002308;1.60e-25;9!UBERON:0009663;3.69e-23;7!UBERON:0003528;7.94e-23;34!UBERON:0002020;7.94e-23;34!UBERON:0001869;1.25e-21;32!UBERON:0002791;2.00e-21;32!UBERON:0005383;2.12e-20;3!UBERON:0005382;2.12e-20;3!UBERON:0001893;1.10e-18;34!UBERON:0002420;5.51e-18;9!UBERON:0007245;5.51e-18;9!UBERON:0010009;5.51e-18;9!UBERON:0010011;5.51e-18;9!UBERON:0000454;5.51e-18;9!UBERON:0001873;2.29e-14;2!UBERON:0002780;6.17e-14;41!UBERON:0001890;6.17e-14;41!UBERON:0001950;7.33e-11;20!UBERON:0002619;7.21e-10;22!UBERON:0001017;3.16e-09;75!UBERON:0000073;4.53e-09;53!UBERON:0002616;4.53e-09;53!UBERON:0000956;1.15e-08;25!UBERON:0000203;1.15e-08;25!UBERON:0000955;2.88e-08;68!UBERON:0001882;9.07e-08;1!UBERON:0001874;9.07e-08;1!UBERON:0002146;9.07e-08;1!UBERON:0005623;9.07e-08;1!UBERON:0005403;9.07e-08;1 | |||
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|short_description=p12@GUCY1A3 | |||
}} |
Revision as of 02:57, 13 September 2013
Short description: | p12@GUCY1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_GUCY1A3_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENST00000515201, uc003ipa.2_5end |
EntrezGene: | GUCY1A3 |
HGNC: | 4685 |
UniProt: | Q6PJR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 5.70e-08 | 1 |
enteroendocrine cell | 5.70e-08 | 1 |
type D enteroendocrine cell | 5.70e-08 | 1 |
somatostatin secreting cell | 5.70e-08 | 1 |
pancreatic D cell | 5.70e-08 | 1 |
progenitor cell of endocrine pancreas | 5.70e-08 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.70e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.