FFCP PHASE1:Hg19::chr9:139874503..139874516,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C485|description=CAGE_peak_at_chr9:139874503..139874516,-|id=chr9:139874503..139874516,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002575;3.81e-11;2!CL:0000784;3.12e-07;3!CL:0002590;5.37e-07;3|ontology_enrichment_celltype_v019_2=CL:0002575,4.02e-11,2;CL:0002590,3.60e-07,3;CL:0000784,3.95e-07,3|ontology_enrichment_development_v019=UBERON:0006241;1.80e-07;3!UBERON:0003057;1.80e-07;3!UBERON:0003056;2.21e-07;3!UBERON:0006601;3.03e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.05e-55!115;UBERON:0005743!6.12e-33!86;UBERON:0002616!2.55e-32!59;UBERON:0001049!9.04e-32!57;UBERON:0005068!9.04e-32!57;UBERON:0006241!9.04e-32!57;UBERON:0007135!9.04e-32!57;UBERON:0001017!3.80e-30!82;UBERON:0000073!5.64e-30!94;UBERON:0001016!5.64e-30!94;UBERON:0003075!2.15e-29!86;UBERON:0007284!2.15e-29!86;UBERON:0000955!7.68e-29!69;UBERON:0006238!7.68e-29!69;UBERON:0002346!1.95e-27!90;UBERON:0001893!2.25e-21!34;UBERON:0003080!2.34e-21!42;UBERON:0002020!4.85e-21!34;UBERON:0003528!4.85e-21!34;UBERON:0002791!3.76e-20!33;UBERON:0002780!4.06e-20!41;UBERON:0001890!4.06e-20!41;UBERON:0006240!4.06e-20!41;UBERON:0001869!1.02e-18!32;UBERON:0003056!3.16e-17!61;UBERON:0000033!5.49e-17!123;UBERON:0000153!1.99e-16!129;UBERON:0007811!1.99e-16!129;UBERON:0004121!1.21e-14!169;UBERON:0002619!1.40e-14!22;UBERON:0001950!3.05e-14!20;UBERON:0000924!5.90e-14!173;UBERON:0006601!5.90e-14!173;UBERON:0002298!6.12e-13!8;UBERON:0000956!2.30e-12!25;UBERON:0000203!2.30e-12!25;UBERON:0003076!1.11e-11!15;UBERON:0003057!1.11e-11!15;UBERON:0002420!3.61e-11!9;UBERON:0007245!3.61e-11!9;UBERON:0010009!3.61e-11!9;UBERON:0010011!3.61e-11!9;UBERON:0000454!3.61e-11!9;UBERON:0002308!4.04e-11!9;UBERON:0000125!4.04e-11!9;UBERON:0000025!1.49e-10!194;UBERON:0000064!2.77e-10!219;UBERON:0000477!4.51e-10!286;UBERON:0000483!7.12e-10!309;UBERON:0000119!1.33e-09!312;UBERON:0000475!2.45e-09!365;UBERON:0000062!2.97e-09!511;UBERON:0001871!3.58e-09!7;UBERON:0004111!3.62e-09!241;UBERON:0004732!3.74e-09!13;UBERON:0009663!1.29e-08!7;UBERON:0004733!7.14e-08!12;UBERON:0002028!7.14e-08!12;UBERON:0007277!7.14e-08!12;UBERON:0000200!6.66e-07!6|ontology_enrichment_uberon_v019=UBERON:0001875;1.32e-10;2!UBERON:0006514;1.32e-10;2!UBERON:0005162;1.93e-10;2!UBERON:0000122;1.93e-10;2!UBERON:0002360;4.40e-10;2!UBERON:0000094;4.40e-10;2!UBERON:0010743;4.40e-10;2!UBERON:0007023;1.04e-09;114!UBERON:0001016;2.52e-09;83!UBERON:0000955;5.70e-09;68!UBERON:0004732;8.05e-09;13!UBERON:0005284;9.32e-09;5!UBERON:0000073;1.16e-08;53!UBERON:0002616;1.16e-08;53!UBERON:0000125;1.73e-08;9!UBERON:0002308;1.73e-08;9!UBERON:0001017;1.82e-08;75!UBERON:0001893;2.82e-08;34!UBERON:0003528;4.47e-08;34!UBERON:0002020;4.47e-08;34!UBERON:0002298;1.53e-07;6!UBERON:0002780;1.79e-07;41!UBERON:0001890;1.79e-07;41!UBERON:0002240;1.80e-07;3!UBERON:0005174;1.80e-07;3!UBERON:0001137;1.80e-07;3!UBERON:0004151;2.07e-07;3!UBERON:0001896;3.12e-07;3!UBERON:0005290;3.12e-07;3!UBERON:0002791;5.58e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.27e-28,114;UBERON:0001017,3.75e-22,81;UBERON:0001016,1.63e-21,89;UBERON:0000955,1.76e-17,68;UBERON:0006238,1.76e-17,68;UBERON:0001049,1.78e-17,56;UBERON:0005068,1.78e-17,56;UBERON:0006241,1.78e-17,56;UBERON:0007135,1.78e-17,56;UBERON:0003075,4.54e-16,82;UBERON:0007284,4.54e-16,82;UBERON:0002346,3.94e-15,86;UBERON:0000073,6.60e-14,53;UBERON:0002616,6.60e-14,53;UBERON:0010371,2.89e-13,104;UBERON:0004121,2.90e-12,171;UBERON:0000924,2.90e-12,171;UBERON:0006601,2.90e-12,171;UBERON:0010314,4.30e-12,132;UBERON:0003076,7.51e-11,15;UBERON:0003057,7.51e-11,15;UBERON:0005162,1.64e-10,2;UBERON:0000122,1.64e-10,2;UBERON:0001875,2.08e-10,2;UBERON:0006514,2.08e-10,2;UBERON:0002360,4.85e-10,2;UBERON:0000094,4.85e-10,2;UBERON:0010743,4.85e-10,2;UBERON:0002780,2.61e-09,41;UBERON:0001890,2.61e-09,41;UBERON:0003080,2.61e-09,41;UBERON:0006240,2.61e-09,41;UBERON:0001893,2.61e-09,34;UBERON:0003528,3.46e-09,34;UBERON:0002020,3.46e-09,34;UBERON:0005284,8.27e-09,5;UBERON:0004732,9.64e-09,13;UBERON:0003056,1.79e-08,61;UBERON:0000125,2.61e-08,9;UBERON:0002308,2.61e-08,9;UBERON:0002791,8.08e-08,32;UBERON:0004151,1.44e-07,3;UBERON:0002240,1.74e-07,3;UBERON:0005174,1.74e-07,3;UBERON:0001137,1.74e-07,3;UBERON:0002298,1.97e-07,6;UBERON:0011216,3.14e-07,223;UBERON:0001896,3.83e-07,3;UBERON:0005290,3.83e-07,3;UBERON:0010096,3.83e-07,3|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C485 | |||
|description=CAGE_peak_at_chr9:139874503..139874516,- | |||
|id=chr9:139874503..139874516,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002575;3.81e-11;2!CL:0000784;3.12e-07;3!CL:0002590;5.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,4.02e-11,2;CL:0002590,3.60e-07,3;CL:0000784,3.95e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.80e-07;3!UBERON:0003057;1.80e-07;3!UBERON:0003056;2.21e-07;3!UBERON:0006601;3.03e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.05e-55!115;UBERON:0005743!6.12e-33!86;UBERON:0002616!2.55e-32!59;UBERON:0001049!9.04e-32!57;UBERON:0005068!9.04e-32!57;UBERON:0006241!9.04e-32!57;UBERON:0007135!9.04e-32!57;UBERON:0001017!3.80e-30!82;UBERON:0000073!5.64e-30!94;UBERON:0001016!5.64e-30!94;UBERON:0003075!2.15e-29!86;UBERON:0007284!2.15e-29!86;UBERON:0000955!7.68e-29!69;UBERON:0006238!7.68e-29!69;UBERON:0002346!1.95e-27!90;UBERON:0001893!2.25e-21!34;UBERON:0003080!2.34e-21!42;UBERON:0002020!4.85e-21!34;UBERON:0003528!4.85e-21!34;UBERON:0002791!3.76e-20!33;UBERON:0002780!4.06e-20!41;UBERON:0001890!4.06e-20!41;UBERON:0006240!4.06e-20!41;UBERON:0001869!1.02e-18!32;UBERON:0003056!3.16e-17!61;UBERON:0000033!5.49e-17!123;UBERON:0000153!1.99e-16!129;UBERON:0007811!1.99e-16!129;UBERON:0004121!1.21e-14!169;UBERON:0002619!1.40e-14!22;UBERON:0001950!3.05e-14!20;UBERON:0000924!5.90e-14!173;UBERON:0006601!5.90e-14!173;UBERON:0002298!6.12e-13!8;UBERON:0000956!2.30e-12!25;UBERON:0000203!2.30e-12!25;UBERON:0003076!1.11e-11!15;UBERON:0003057!1.11e-11!15;UBERON:0002420!3.61e-11!9;UBERON:0007245!3.61e-11!9;UBERON:0010009!3.61e-11!9;UBERON:0010011!3.61e-11!9;UBERON:0000454!3.61e-11!9;UBERON:0002308!4.04e-11!9;UBERON:0000125!4.04e-11!9;UBERON:0000025!1.49e-10!194;UBERON:0000064!2.77e-10!219;UBERON:0000477!4.51e-10!286;UBERON:0000483!7.12e-10!309;UBERON:0000119!1.33e-09!312;UBERON:0000475!2.45e-09!365;UBERON:0000062!2.97e-09!511;UBERON:0001871!3.58e-09!7;UBERON:0004111!3.62e-09!241;UBERON:0004732!3.74e-09!13;UBERON:0009663!1.29e-08!7;UBERON:0004733!7.14e-08!12;UBERON:0002028!7.14e-08!12;UBERON:0007277!7.14e-08!12;UBERON:0000200!6.66e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001875;1.32e-10;2!UBERON:0006514;1.32e-10;2!UBERON:0005162;1.93e-10;2!UBERON:0000122;1.93e-10;2!UBERON:0002360;4.40e-10;2!UBERON:0000094;4.40e-10;2!UBERON:0010743;4.40e-10;2!UBERON:0007023;1.04e-09;114!UBERON:0001016;2.52e-09;83!UBERON:0000955;5.70e-09;68!UBERON:0004732;8.05e-09;13!UBERON:0005284;9.32e-09;5!UBERON:0000073;1.16e-08;53!UBERON:0002616;1.16e-08;53!UBERON:0000125;1.73e-08;9!UBERON:0002308;1.73e-08;9!UBERON:0001017;1.82e-08;75!UBERON:0001893;2.82e-08;34!UBERON:0003528;4.47e-08;34!UBERON:0002020;4.47e-08;34!UBERON:0002298;1.53e-07;6!UBERON:0002780;1.79e-07;41!UBERON:0001890;1.79e-07;41!UBERON:0002240;1.80e-07;3!UBERON:0005174;1.80e-07;3!UBERON:0001137;1.80e-07;3!UBERON:0004151;2.07e-07;3!UBERON:0001896;3.12e-07;3!UBERON:0005290;3.12e-07;3!UBERON:0002791;5.58e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.27e-28,114;UBERON:0001017,3.75e-22,81;UBERON:0001016,1.63e-21,89;UBERON:0000955,1.76e-17,68;UBERON:0006238,1.76e-17,68;UBERON:0001049,1.78e-17,56;UBERON:0005068,1.78e-17,56;UBERON:0006241,1.78e-17,56;UBERON:0007135,1.78e-17,56;UBERON:0003075,4.54e-16,82;UBERON:0007284,4.54e-16,82;UBERON:0002346,3.94e-15,86;UBERON:0000073,6.60e-14,53;UBERON:0002616,6.60e-14,53;UBERON:0010371,2.89e-13,104;UBERON:0004121,2.90e-12,171;UBERON:0000924,2.90e-12,171;UBERON:0006601,2.90e-12,171;UBERON:0010314,4.30e-12,132;UBERON:0003076,7.51e-11,15;UBERON:0003057,7.51e-11,15;UBERON:0005162,1.64e-10,2;UBERON:0000122,1.64e-10,2;UBERON:0001875,2.08e-10,2;UBERON:0006514,2.08e-10,2;UBERON:0002360,4.85e-10,2;UBERON:0000094,4.85e-10,2;UBERON:0010743,4.85e-10,2;UBERON:0002780,2.61e-09,41;UBERON:0001890,2.61e-09,41;UBERON:0003080,2.61e-09,41;UBERON:0006240,2.61e-09,41;UBERON:0001893,2.61e-09,34;UBERON:0003528,3.46e-09,34;UBERON:0002020,3.46e-09,34;UBERON:0005284,8.27e-09,5;UBERON:0004732,9.64e-09,13;UBERON:0003056,1.79e-08,61;UBERON:0000125,2.61e-08,9;UBERON:0002308,2.61e-08,9;UBERON:0002791,8.08e-08,32;UBERON:0004151,1.44e-07,3;UBERON:0002240,1.74e-07,3;UBERON:0005174,1.74e-07,3;UBERON:0001137,1.74e-07,3;UBERON:0002298,1.97e-07,6;UBERON:0011216,3.14e-07,223;UBERON:0001896,3.83e-07,3;UBERON:0005290,3.83e-07,3;UBERON:0010096,3.83e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,1.37528029272598,0,0,0,0,0,2.38490624305342,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,1.15235184896,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0.594524649154913,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0.428933980974443,3.7983512377401,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,3.32861967686659,3.0882908142977,0,0,0,0,0,0,0.496215615637554,0,0.280660094433074,0.896974044789907,0,1.12597744800525,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,1.86079184679834,0.632758849437452,1.5250415513906,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0.969332746095218,3.33965153382665,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.844175070377856,0,0.331737779793674,2.36438095162838,1.31631238292384,0,0,2.07765697960252,2.16489906109302,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,2.56124305326573,0,1.87411556580271,0,0,0,0.394584402849391,0,0.30607276163049,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,1.58186518546373,0,0,1.32952671507345,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,3.00210144354895,1.23214841002794,0,0,0,1.67569440763353,0.458320848023367,0,0.798716001995964,2.14613024068285,0,0.470284307407084,0,0,0,0,0.0674035438541849,0,0,0,0.817220436669454,0,0,0,0,0,0.728994679896296,0,0.315222829196793,0,0,0,0,7.14695326373367,1.98627591109629,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,1.3223260174269,0,0,0.640724475406168,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.610131324509816,0.3755727921195,2.86704597845036,0.776503360757966,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,0,0.478901577171454,0.205116364240755,0,2.07471757392654,0.968853873791107,1.42769420259154,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.945526184657525,0.781078098613847,0,1.58539525484767,0,0,0.496211178389294,0,0,0,0,0,0,0.354809480650555,0,0,0.951576261675644,2.03895598044832,0,0,1.49136876415977,0.628462359664008,0,0,0,0,4.64597537148266,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55201007249429,0.297046400327086,2.113278637917,0,0.563903507879121,0.0644578879735772,0,0,0,0,0,0,1.29005624836306,0,1.97175321553653,0,0,0,0,0,0,0,0,0,0,0,0,5.98651715924091,1.33982065078089,0,0.930896962757057,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p@chr9:139874503..139874516,- | |||
}} |
Revision as of 08:17, 14 September 2013
Short description: | p@chr9:139874503..139874516, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:139874503..139874516, - |
Coexpression cluster: | C485_Pericytes_retina_cerebral_Dendritic_testis_corpus_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 4.02e-11 | 2 |
smooth muscle cell of the brain vasculature | 3.60e-07 | 3 |
plasmacytoid dendritic cell | 3.95e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.