FFCP PHASE1:Hg19::chr16:11038374..11038392,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23274 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29013 | |||
|TSSclassifier=strong | |||
|UniProt=Q2KHT3,F5H4D0 | |||
|association_with_transcript=29bp_to_ENST00000409790,ENST00000542102,NM_001243403,NM_015226,uc002dan.3,uc002dao.2_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_CLEC16A_5end | |||
|id=chr16:11038374..11038392,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.28e-18!57;UBERON:0005068!6.28e-18!57;UBERON:0006241!6.28e-18!57;UBERON:0007135!6.28e-18!57;UBERON:0000073!6.96e-17!94;UBERON:0001016!6.96e-17!94;UBERON:0005743!1.19e-16!86;UBERON:0001017!2.39e-16!82;UBERON:0000955!7.16e-16!69;UBERON:0006238!7.16e-16!69;UBERON:0007023!1.10e-15!115;UBERON:0003080!1.87e-15!42;UBERON:0002780!5.58e-15!41;UBERON:0001890!5.58e-15!41;UBERON:0006240!5.58e-15!41;UBERON:0003075!7.23e-15!86;UBERON:0007284!7.23e-15!86;UBERON:0002616!1.52e-14!59;UBERON:0001893!1.27e-13!34;UBERON:0002791!3.65e-13!33;UBERON:0001869!5.22e-13!32;UBERON:0002346!6.09e-13!90;UBERON:0002020!1.08e-12!34;UBERON:0003528!1.08e-12!34;UBERON:0003056!4.52e-12!61;UBERON:0002619!1.15e-11!22;UBERON:0001950!1.11e-10!20;UBERON:0000956!2.22e-09!25;UBERON:0000203!2.22e-09!25;UBERON:0004121!3.68e-08!169;UBERON:0000924!2.82e-07!173;UBERON:0006601!2.82e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.04e-13;34!UBERON:0001869;1.70e-13;32!UBERON:0002791;3.88e-13;32!UBERON:0002619;5.74e-13;22!UBERON:0002780;2.13e-12;41!UBERON:0001890;2.13e-12;41!UBERON:0003528;2.80e-12;34!UBERON:0002020;2.80e-12;34!UBERON:0001950;5.26e-12;20!UBERON:0000956;2.33e-10;25!UBERON:0000203;2.33e-10;25!UBERON:0000073;4.06e-10;53!UBERON:0002616;4.06e-10;53!UBERON:0001016;7.07e-09;83!UBERON:0001017;7.47e-09;75!UBERON:0000955;1.25e-08;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.04e-20,56;UBERON:0005068,6.04e-20,56;UBERON:0006241,6.04e-20,56;UBERON:0007135,6.04e-20,56;UBERON:0000073,1.26e-18,53;UBERON:0002616,1.26e-18,53;UBERON:0001016,1.35e-18,89;UBERON:0002780,5.88e-18,41;UBERON:0001890,5.88e-18,41;UBERON:0003080,5.88e-18,41;UBERON:0006240,5.88e-18,41;UBERON:0001017,6.34e-18,81;UBERON:0000955,9.36e-18,68;UBERON:0006238,9.36e-18,68;UBERON:0001893,1.64e-16,34;UBERON:0001869,9.97e-16,32;UBERON:0002791,2.67e-15,32;UBERON:0003528,6.91e-15,34;UBERON:0002020,6.91e-15,34;UBERON:0003075,7.53e-15,82;UBERON:0007284,7.53e-15,82;UBERON:0003056,2.17e-14,61;UBERON:0007023,6.80e-14,114;UBERON:0010371,6.80e-14,104;UBERON:0002619,7.21e-14,22;UBERON:0002346,3.56e-13,86;UBERON:0001950,1.29e-12,20;UBERON:0000956,3.95e-11,25;UBERON:0000203,3.95e-11,25;UBERON:0004121,3.91e-09,171;UBERON:0000924,3.91e-09,171;UBERON:0006601,3.91e-09,171;UBERON:0010314,4.65e-07,132 | |||
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| |||
|short_description=p2@CLEC16A | |||
}} |
Revision as of 02:20, 12 January 2014
Short description: | p2@CLEC16A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLEC16A_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 29bp_to_ENST00000409790, ENST00000542102, NM_001243403, NM_015226, uc002dan.3, uc002dao.2_5end |
EntrezGene: | CLEC16A |
HGNC: | 29013 |
UniProt: | Q2KHT3F5H4D0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 6.04e-20 | 56 |
neural rod | 6.04e-20 | 56 |
future spinal cord | 6.04e-20 | 56 |
neural keel | 6.04e-20 | 56 |
regional part of nervous system | 1.26e-18 | 53 |
regional part of brain | 1.26e-18 | 53 |
nervous system | 1.35e-18 | 89 |
regional part of forebrain | 5.88e-18 | 41 |
forebrain | 5.88e-18 | 41 |
anterior neural tube | 5.88e-18 | 41 |
future forebrain | 5.88e-18 | 41 |
central nervous system | 6.34e-18 | 81 |
brain | 9.36e-18 | 68 |
future brain | 9.36e-18 | 68 |
telencephalon | 1.64e-16 | 34 |
cerebral hemisphere | 9.97e-16 | 32 |
regional part of telencephalon | 2.67e-15 | 32 |
brain grey matter | 6.91e-15 | 34 |
gray matter | 6.91e-15 | 34 |
neural plate | 7.53e-15 | 82 |
presumptive neural plate | 7.53e-15 | 82 |
pre-chordal neural plate | 2.17e-14 | 61 |
adult organism | 6.80e-14 | 114 |
ecto-epithelium | 6.80e-14 | 104 |
regional part of cerebral cortex | 7.21e-14 | 22 |
neurectoderm | 3.56e-13 | 86 |
neocortex | 1.29e-12 | 20 |
cerebral cortex | 3.95e-11 | 25 |
pallium | 3.95e-11 | 25 |
ectoderm-derived structure | 3.91e-09 | 171 |
ectoderm | 3.91e-09 | 171 |
presumptive ectoderm | 3.91e-09 | 171 |
structure with developmental contribution from neural crest | 4.65e-07 | 132 |