FFCP PHASE1:Hg19::chr16:31021921..31022044,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=112755 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18539 | |||
|TSSclassifier=strong | |||
|UniProt=P61266 | |||
|association_with_transcript=-92bp_to_NM_052874,uc010cad.2,uc010vfd.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_STX1B_5end | |||
|id=chr16:31021921..31022044,- | |||
|ontology_enrichment_celltype=CL:0000055!8.42e-16!180;CL:0000133!1.55e-12!59;CL:0002319!1.12e-10!25;CL:0000221!1.58e-08!71;CL:0000393!3.22e-08!60;CL:0000211!3.22e-08!60;CL:0000333!4.94e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002319;9.66e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.90e-13,59;CL:0002319,8.22e-11,25;CL:0000221,7.77e-09,72;CL:0000047,6.40e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.06e-10;82!CL:0000133;3.43e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.15e-47!94;UBERON:0001016!1.15e-47!94;UBERON:0005743!5.29e-45!86;UBERON:0001017!2.17e-44!82;UBERON:0000955!3.10e-36!69;UBERON:0006238!3.10e-36!69;UBERON:0001049!1.08e-35!57;UBERON:0005068!1.08e-35!57;UBERON:0006241!1.08e-35!57;UBERON:0007135!1.08e-35!57;UBERON:0002346!6.90e-35!90;UBERON:0003075!8.76e-35!86;UBERON:0007284!8.76e-35!86;UBERON:0002616!1.34e-32!59;UBERON:0003056!1.62e-27!61;UBERON:0000924!3.98e-27!173;UBERON:0006601!3.98e-27!173;UBERON:0002780!6.13e-27!41;UBERON:0001890!6.13e-27!41;UBERON:0006240!6.13e-27!41;UBERON:0004121!1.26e-26!169;UBERON:0003080!1.05e-25!42;UBERON:0000033!7.64e-24!123;UBERON:0000153!6.28e-23!129;UBERON:0007811!6.28e-23!129;UBERON:0001893!9.68e-23!34;UBERON:0002020!1.03e-22!34;UBERON:0003528!1.03e-22!34;UBERON:0002791!5.74e-22!33;UBERON:0001869!1.52e-21!32;UBERON:0000956!1.09e-16!25;UBERON:0000203!1.09e-16!25;UBERON:0002619!9.03e-16!22;UBERON:0007023!5.37e-15!115;UBERON:0001950!1.96e-14!20;UBERON:0000475!9.89e-13!365;UBERON:0003076!5.43e-11!15;UBERON:0003057!5.43e-11!15;UBERON:0000119!2.57e-10!312;UBERON:0000483!6.17e-10!309;UBERON:0000025!6.41e-10!194;UBERON:0004732!9.75e-10!13;UBERON:0004733!3.83e-09!12;UBERON:0002028!3.83e-09!12;UBERON:0007277!3.83e-09!12;UBERON:0002420!1.67e-07!9;UBERON:0007245!1.67e-07!9;UBERON:0010009!1.67e-07!9;UBERON:0010011!1.67e-07!9;UBERON:0000454!1.67e-07!9;UBERON:0002308!1.73e-07!9;UBERON:0000125!1.73e-07!9;UBERON:0000481!2.77e-07!347;UBERON:0002680!3.24e-07!9;UBERON:0001895!3.24e-07!9;UBERON:0010092!3.24e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.54e-25;53!UBERON:0002616;7.54e-25;53!UBERON:0001893;1.88e-24;34!UBERON:0003528;3.58e-24;34!UBERON:0002020;3.58e-24;34!UBERON:0001869;4.07e-24;32!UBERON:0002780;6.41e-24;41!UBERON:0001890;6.41e-24;41!UBERON:0002791;6.43e-24;32!UBERON:0000956;1.08e-20;25!UBERON:0000203;1.08e-20;25!UBERON:0002619;1.35e-19;22!UBERON:0000955;1.54e-19;68!UBERON:0001017;2.52e-19;75!UBERON:0001016;4.47e-19;83!UBERON:0001950;6.30e-18;20!UBERON:0004732;1.01e-11;13!UBERON:0004733;5.57e-11;12!UBERON:0002028;5.57e-11;12!UBERON:0002420;5.62e-09;9!UBERON:0007245;5.62e-09;9!UBERON:0010009;5.62e-09;9!UBERON:0010011;5.62e-09;9!UBERON:0000454;5.62e-09;9!UBERON:0000125;5.88e-09;9!UBERON:0002308;5.88e-09;9!UBERON:0002680;1.40e-08;9!UBERON:0001895;1.40e-08;9!UBERON:0011216;1.77e-07;132!UBERON:0009663;2.71e-07;7!UBERON:0010314;3.68e-07;132!UBERON:0000200;5.00e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.18e-57,89;UBERON:0001017,3.95e-54,81;UBERON:0001049,5.12e-46,56;UBERON:0005068,5.12e-46,56;UBERON:0006241,5.12e-46,56;UBERON:0007135,5.12e-46,56;UBERON:0000955,5.68e-44,68;UBERON:0006238,5.68e-44,68;UBERON:0003075,1.53e-43,82;UBERON:0007284,1.53e-43,82;UBERON:0000073,1.60e-43,53;UBERON:0002616,1.60e-43,53;UBERON:0002346,5.21e-43,86;UBERON:0003056,2.46e-34,61;UBERON:0002780,1.68e-33,41;UBERON:0001890,1.68e-33,41;UBERON:0003080,1.68e-33,41;UBERON:0006240,1.68e-33,41;UBERON:0004121,1.47e-32,171;UBERON:0000924,1.47e-32,171;UBERON:0006601,1.47e-32,171;UBERON:0010371,4.12e-31,104;UBERON:0001893,2.94e-28,34;UBERON:0003528,3.18e-28,34;UBERON:0002020,3.18e-28,34;UBERON:0010314,2.21e-27,132;UBERON:0001869,9.11e-27,32;UBERON:0002791,1.64e-26,32;UBERON:0000956,1.06e-20,25;UBERON:0000203,1.06e-20,25;UBERON:0002619,1.45e-19,22;UBERON:0001950,6.74e-18,20;UBERON:0007023,2.53e-15,114;UBERON:0011216,3.08e-15,223;UBERON:0003076,2.64e-13,15;UBERON:0003057,2.64e-13,15;UBERON:0004732,9.61e-12,13;UBERON:0004733,5.27e-11,12;UBERON:0002028,5.27e-11,12;UBERON:0007277,5.27e-11,12;UBERON:0000025,5.61e-09,192;UBERON:0002420,5.74e-09,9;UBERON:0007245,5.74e-09,9;UBERON:0010009,5.74e-09,9;UBERON:0010011,5.74e-09,9;UBERON:0000454,5.74e-09,9;UBERON:0000125,6.01e-09,9;UBERON:0002308,6.01e-09,9;UBERON:0002680,1.31e-08,9;UBERON:0001895,1.31e-08,9;UBERON:0010092,1.31e-08,9;UBERON:0000119,2.34e-07,309;UBERON:0009663,2.76e-07,7;UBERON:0000483,3.77e-07,306;UBERON:0000200,5.13e-07,6 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,1.8564952944007,1.32558950291166,1.34465029290355,3.61616716814386,3.65155045193687,0.975865597581014,6.64853713614655,7.34402488479311,7.8363680369522,4.00730381983479,4.92747930262383,2.76193807108566,0,0.0821005894499457,0,0,0,1.70297735647684,0,0,0,0,0,0.587200878669695,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0.619412741790207,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.57367816091066,1.96505381374582,0.411202997999018,0,0.32592226663359,1.4203434172042,0,0,0,0,0,0,0,0,0.276350017785848,0,1.18629250529648,1.87278579662799,1.04535523804977,0,0,0,0,0.637130828648193,0.651083453856419,0,0.752875595388864,0.639933055772092,1.24930726552346,0.473554504088034,0,0.201606743224732,0.267440195783507,1.30341963494519,0,0,0.12786256184353,0,0,0.144846518960824,3.1811437882044,0.973269740605272,4.91581049253153,5.5432349365641,4.91874799881506,55.8625756997744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0.496971951695318,0.506522046658319,3.31022952033047,0.860509862246441,1.41867352879343,1.68203280042692,0,0.49333509683432,1.55605517699883,0.134710672069688,0,1.21085942115945,2.30470369792,3.04617861383936,0.312160076830321,1.1409436430889,0.448346041655403,1.05691048779388,0,0.702254033511242,0.61246251376468,1.84251475967652,0.413303124703062,0,0.247266929278557,0,2.15585442544872,1.68336113954066,1.37630371859161,0,0.877955241761676,0,0.150238058906597,0,8.07253360599879,2.34913127700424,3.17897851739343,12.9039171316293,5.5648365788757,4.3798891807757,2.41951913231067,6.24472429292685,1.16924406193438,15.9033277773792,3.58994604704967,4.20279747728911,21.6555851435135,4.43309232201617,2.03472710772585,0,0,0,18.7839507439577,10.8674410023618,11.5032003440823,9.95146128147556,8.32658807889574,6.20461510428911,0,1.28648187638577,1.38134921352481,0.928735856063958,1.44375896333917,0,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,5.31710916013264,0,0,2.05881372358231,0,0,0,0,0.325808305310325,1.03993478527958,5.77325368101093,3.36198174427723,1.52631302506568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.176096868026452,0.207328115540772,0,0,0.126995788584338,0.381988425558278,0,1.71072446022705,0,0,0,3.81245686774226,0.43596006883328,1.3200891447771,3.23179289394444,0,0,1.86156681609409,0,0.257207374262142,2.83698264046557,0.799266537048298,0.142977993658148,0,3.29296134712308,0.325736184293735,0,0,0.904318131178758,4.35766729300147,2.7992437530976,0,0,0,0.479249710983165,3.44585807502342,11.4109524032575,0,0.821905290201534,0.179060963239896,0,0,0.215627574859517,0.641715181398742,14.229298956458,46.8503473887438,30.9315525111078,42.8841639255933,22.9657950595139,0,0,0,0.981531933753119,2.00068208423871,0.813795071099207,1.24782516918484,1.96271887676878,1.10391690523754,4.80279801470124,2.10662269809403,0,7.24311499047534,4.64957918974806,4.97796755062599,3.0409265063829,3.91602314925481,1.37257369524342,1.24060815673732,1.07857100409308,0.853820462427555,0,0,0,0.248107807818777,0.460385919864187,0,0.128139149255701,0,0.160853921143607,0,3.39261326365842,5.68197521002007,3.20295908453856,2.59627214591811,1.39452454151951,0,0,0,0,0.728364672026868,0.786746489756545,0.451199612907412,0.15403067420883,0.784349769176855,0,0.527758144464379,0,0,1.29549549661284,0,2.98041081298238,2.50844886927427,0.254876273045038,0,0.895499018888713,0,0,1.79515087581472,0.656029291399411,0.976135183992909,0,0,0.082509499920588,0.574265537996172,0.650060246036521,0,11.9871690682231,0.924291702687866,1.07452572308291,0.413509717453592,2.36324538710202,2.17525040871343,2.04543905798642,7.56772302997267,0,0,0.127612712494584,0,3.253918845081,10.0739950985805,2.0911118104818,0.308033580176089,1.06461206063404,1.73986598415015,0.55597265731176,0,1.86079184679834,0.632758849437452,0,4.09436466098134,0.855877976067841,0.95460974377781,0,1.2591072030832,1.37268514868027,0.471249609382746,0.404364963146632,1.58510321173008,1.26377536871694,0.975267478179181,0.974853958525138,1.05650146756755,0.272999822815972,0.424216295861138,3.39024349860728,2.2054613741845,0.66343897524122,0.876901770507525,1.73632660280006,2.62357900818653,0.405820753925408,0.92947049429925,3.66204283291914,1.86434757865267,0.196498082026242,0.7133421029625,2.83808851256478,0,0,2.27683904259429,2.44954304171488,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,6.83674055215828,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07875276582847,0,176.958281302401,132.791929091524,8.79338769680957,0,15.2010293852155,1.39473591775749,3.03912307084262,0,4.39755334759266,0,0.311039587661807,0,0,0,0.295930216910801,0,0,225.854529840186,325.987096940745,103.799174960621,0,0,0,0,0,0,4.82640722538051,0.291604613383254,7.11862479226498,122.23231124231,138.806500857845,216.666065570258,342.795705786796,263.924023725518,313.721117930181,0,0,1.69290568708354,0,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,1.94749775767882,0.995261931078505,0.265372693510018,0,0.889563386041866,2.47127877893006,3.9680340812073,36.531414075527,0.802577647298789,145.009691903985,0,0,3.88448607254548,0.789168805698781,0,103.452593431106,7.01371033876216,0,0,0,0,0,0,1.13843818411917,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,2.29465929397901,24.179939263517,0.411125773940253,0,330.608976481599,0,0.0801588202515337,0.213452994739353,0,0,0,0.171594997861965,0,0,0,7.20292292190154,9.30965332179765,0.509991088181609,4.33425884852278,60.6424491596887,39.15493836311,1.27746588066972,2.14882720709979,0,0,0.687481272035051,0.717873024576814,0,0,0,0.53746777989381,0.360299883542404,0,0,0,0,0,0,127.236750369489,119.995200784298,5.14410075088061,7.01451126645892,7.06248574649615,0,0,354.777410882864,0,0,0.891727998294968,6.23041985464498,0,0,0,0,0.5085370753095,4.88699641578341,6.04955043840887,9.79762080328227,4.7892076624995,0,2.72620834856675,4.53248366080503,0,0,190.045945851479,96.1331014669356,0,0,0,0.314408610199332,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,212.656363192077,263.332679658437,253.010870957836,32.110914958644,84.1951501164709,155.799874979931,0.138348634936231,0.249960815924213,0,0,2.35265819698172,4.21501415226193,0.579684114443301,2.08956724041624,6.54397267572229,6.65767033803136,7.95492622155374,3.52195062453605,0,0.915360273587694,5.44431325547661,2.33155800874171,1.03498604992744,4.30101271341996,0,4.03683687878274,6.22059311761283,8.77277658041383,1.5652351854352,4.95850109690821,3.42724690951916,3.25496586563729,3.63697318405119,3.00749559718968,7.4245401580559,3.58286299828754,4.40030541129469,1.37358282073117,1.01024846629776,0,0,0.428883182749851,0.260994291965212,0,1.62065732026684,0,1.4327107286519,0,0,2.8270263351341,0,0.844712203265363,0,0,0,224.393441874259,0,0,0,0,0,0,0,0,0,5.10764358210152,0,0,8.08700438042865,30.5667547415728,8.19468566614782,1.41539347670307,18.6748481308344,0,20.1946174096599,0.867550349813015,0,1.90802610392051,1.1829261750188,3.20228299314188,1.76337971845342,0.918736432059601,304.382297732122,233.799350937215,191.08172929141,318.340597301652,71.0842183345245,536.936908132188,264.012680608077,28.5538840518309,0,0,0,0,0.381382095467167,0,0,1.35378591028663,0.40341013740704,0,0,0,0,388.206036386532,192.92629035762,267.866088265535,370.221499912028,80.9522717346965,0,0.496211178389294,4.04503862027127,0,23.0351789427663,11.43364655544,7.28358725083958,9.7894742281058,0,0,0,370.774893388617,425.023662763131,0,0.111231401892069,0.627944742804112,263.482844289135,0,7.30526976407596,0,0,18.8698076626373,15.8013611732727,24.9919064541469,0.173858272302579,5.61197955311177,0,0,0,0,3.78662402337809,4.26067023795788,1.69354820076372,0.22910686854405,0,0.955538938977433,0,0,0,0,0,1.1598144313382,0.485710993059139,1.16969731731053,7.95803100645473,0.594600453887843,0,9.67476547359776,2.41540549706678,0.694567422971502,1.09279780251979,0,0,0,53.9848284566099,21.9814336242044,83.6858340615132,1.18948980281472,0.187967835959707,0.322289439867886,0,0,0,0,0.730336388246517,1.37618785021362,13.330581233085,2.68211655728414,436.3013925551,77.2340721902468,5.81929524566941,2.60396512716726,1.38652688589425,0.865253124247578,0.756998549010474,0.546327859818478,0.886889507080059,0.101988829741982,2.6721740526556,0,0,1.43979526614655,3.21556956187414,47.2626580491504,52.337095906119,0.639701945702943,1.66645102024618,0.516711278688049,0.372448285775147,1.45771421354797,0,0,0,0.684466602170562,1.48174516632093,0.0717222053926763,1.66330178273007,0,8.75164236197267,5.7921684686082,0,0,2.44482888365733,3.25516942652591,0.665756774185513,1.40891655513718,0 | |||
|short_description=p1@STX1B | |||
}} |
Revision as of 03:16, 12 January 2014
Short description: | p1@STX1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STX1B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -92bp_to_NM_052874, uc010cad.2, uc010vfd.1_5end |
EntrezGene: | STX1B |
HGNC: | 18539 |
UniProt: | P61266 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.90e-13 | 59 |
neural cell | 8.22e-11 | 25 |
ectodermal cell | 7.77e-09 | 72 |
neuronal stem cell | 6.40e-07 | 8 |