FFCP PHASE1:Hg19::chr19:40854559..40854625,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23646 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17158 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IV08,B4DEL6 | |||
|association_with_transcript=0bp_to_ENST00000356508,ENST00000409419,ENST00000409587,ENST00000536031_5end | |||
|coexpression_cluster_id=C1060 | |||
|description=CAGE_peak_2_at_PLD3_5end | |||
|id=chr19:40854559..40854625,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.37e-09!180;CL:0000183!1.43e-08!59;CL:0000192!6.44e-08!42;CL:0000514!6.44e-08!42;CL:0000680!2.16e-07!57;CL:0000056!2.16e-07!57;CL:0000355!2.16e-07!57;CL:0000187!4.12e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000134;8.05e-08;55!CL:0000349;5.46e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.47e-08,43;CL:0000514,3.47e-08,43;CL:0000680,1.23e-07,58;CL:0000056,1.23e-07,58;CL:0000355,1.23e-07,58;CL:0000187,2.34e-07,55;CL:0000349,5.37e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.30e-21!365;UBERON:0000119!1.63e-19!312;UBERON:0000483!1.74e-19!309;UBERON:0000025!2.25e-19!194;UBERON:0004111!2.31e-19!241;UBERON:0000468!4.36e-19!659;UBERON:0002616!7.26e-17!59;UBERON:0000477!1.27e-16!286;UBERON:0000480!1.35e-16!626;UBERON:0000467!1.65e-16!625;UBERON:0001049!2.31e-15!57;UBERON:0005068!2.31e-15!57;UBERON:0006241!2.31e-15!57;UBERON:0007135!2.31e-15!57;UBERON:0000955!3.37e-15!69;UBERON:0006238!3.37e-15!69;UBERON:0003075!1.25e-14!86;UBERON:0007284!1.25e-14!86;UBERON:0002346!1.46e-13!90;UBERON:0000033!1.34e-12!123;UBERON:0000481!1.78e-12!347;UBERON:0002050!4.89e-12!605;UBERON:0005423!4.89e-12!605;UBERON:0001017!6.27e-12!82;UBERON:0000923!6.98e-12!604;UBERON:0005291!6.98e-12!604;UBERON:0006598!6.98e-12!604;UBERON:0002532!6.98e-12!604;UBERON:0005743!7.42e-12!86;UBERON:0002780!8.38e-12!41;UBERON:0001890!8.38e-12!41;UBERON:0006240!8.38e-12!41;UBERON:0003080!1.67e-11!42;UBERON:0000922!2.57e-11!612;UBERON:0003056!2.78e-11!61;UBERON:0000153!5.29e-11!129;UBERON:0007811!5.29e-11!129;UBERON:0000062!8.84e-11!511;UBERON:0000064!1.45e-10!219;UBERON:0000073!3.12e-10!94;UBERON:0001016!3.12e-10!94;UBERON:0007023!3.49e-10!115;UBERON:0004121!3.62e-10!169;UBERON:0000924!1.15e-09!173;UBERON:0006601!1.15e-09!173;UBERON:0001893!5.50e-09!34;UBERON:0001869!1.19e-08!32;UBERON:0002020!1.37e-08!34;UBERON:0003528!1.37e-08!34;UBERON:0002619!1.70e-08!22;UBERON:0002791!1.87e-08!33;UBERON:0002049!2.57e-08!79;UBERON:0007798!2.57e-08!79;UBERON:0001950!5.76e-08!20;UBERON:0001134!9.21e-08!61;UBERON:0002036!9.21e-08!61;UBERON:0003082!9.21e-08!61;UBERON:0002385!1.98e-07!63;UBERON:0001015!1.98e-07!63;UBERON:0000383!1.98e-07!63;UBERON:0000486!2.32e-07!82;UBERON:0003914!3.59e-07!118;UBERON:0000055!4.22e-07!69;UBERON:0004290!4.50e-07!70;UBERON:0004872!6.14e-07!84;UBERON:0005256!7.82e-07!143;UBERON:0000914!9.30e-07!83;UBERON:0002329!9.30e-07!83;UBERON:0003077!9.30e-07!83;UBERON:0003059!9.30e-07!83;UBERON:0007282!9.30e-07!83;UBERON:0009618!9.30e-07!83;UBERON:0007285!9.30e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.56e-09;53!UBERON:0002616;4.56e-09;53!UBERON:0002780;1.27e-08;41!UBERON:0001890;1.27e-08;41!UBERON:0002619;1.64e-08;22!UBERON:0001893;5.39e-08;34!UBERON:0001950;5.58e-08;20!UBERON:0001869;8.36e-08;32!UBERON:0000955;1.30e-07;68!UBERON:0003528;1.79e-07;34!UBERON:0002020;1.79e-07;34!UBERON:0002791;1.90e-07;32!UBERON:0001017;2.84e-07;75 | |||
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| |||
|short_description=p2@PLD3 | |||
}} |
Revision as of 23:20, 20 January 2014
Short description: | p2@PLD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLD3_5end |
Coexpression cluster: | C1060_Mesenchymal_Pericytes_Fibroblast_occipital_Renal_temporal_Nucleus |
Association with transcript: | 0bp_to_ENST00000356508, ENST00000409419, ENST00000409587, ENST00000536031_5end |
EntrezGene: | PLD3 |
HGNC: | 17158 |
UniProt: | Q8IV08B4DEL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.47e-08 | 43 |
smooth muscle myoblast | 3.47e-08 | 43 |
muscle precursor cell | 1.23e-07 | 58 |
myoblast | 1.23e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-07 | 58 |
muscle cell | 2.34e-07 | 55 |
extraembryonic cell | 5.37e-07 | 19 |