FFCP PHASE1:Hg19::chr22:22090064..22090127,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29799 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12845 | |||
|TSSclassifier=strong | |||
|UniProt=O60688 | |||
|association_with_transcript=0bp_to_ENST00000339468,NM_013313,uc002zvl.2,uc002zvm.2_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_YPEL1_5end | |||
|id=chr22:22090064..22090127,- | |||
|ontology_enrichment_celltype=CL:0000542!9.18e-11!53;CL:0000051!9.18e-11!53;CL:0000838!1.06e-10!52;CL:0000084!3.47e-07!25;CL:0000827!3.47e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000542;7.98e-08;53!CL:0000236;1.33e-07;13!CL:0000084;2.18e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.57e-11,53;CL:0000051,8.57e-11,53;CL:0000838,1.02e-10,52;CL:0000084,2.01e-07,25;CL:0000827,2.01e-07,25;CL:0000236,3.04e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;7.98e-08;53!UBERON:0006601;3.92e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.19e-27!115;UBERON:0000073!4.57e-26!94;UBERON:0001016!4.57e-26!94;UBERON:0005743!4.62e-26!86;UBERON:0001017!1.06e-25!82;UBERON:0001049!2.40e-24!57;UBERON:0005068!2.40e-24!57;UBERON:0006241!2.40e-24!57;UBERON:0007135!2.40e-24!57;UBERON:0002346!4.77e-21!90;UBERON:0002780!5.17e-21!41;UBERON:0001890!5.17e-21!41;UBERON:0006240!5.17e-21!41;UBERON:0000955!5.25e-21!69;UBERON:0006238!5.25e-21!69;UBERON:0003080!7.25e-21!42;UBERON:0003075!1.43e-20!86;UBERON:0007284!1.43e-20!86;UBERON:0002616!1.24e-19!59;UBERON:0001893!2.85e-19!34;UBERON:0001869!5.15e-19!32;UBERON:0002791!9.19e-19!33;UBERON:0002020!1.46e-18!34;UBERON:0003528!1.46e-18!34;UBERON:0003056!4.34e-16!61;UBERON:0000956!6.55e-15!25;UBERON:0000203!6.55e-15!25;UBERON:0002619!3.44e-14!22;UBERON:0001950!5.25e-13!20;UBERON:0000153!1.79e-10!129;UBERON:0007811!1.79e-10!129;UBERON:0000924!4.21e-10!173;UBERON:0006601!4.21e-10!173;UBERON:0004121!1.26e-09!169;UBERON:0000033!8.66e-09!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.10e-19;32!UBERON:0002791;6.73e-19;32!UBERON:0001893;1.09e-18;34!UBERON:0003528;2.90e-18;34!UBERON:0002020;2.90e-18;34!UBERON:0002780;2.61e-17;41!UBERON:0001890;2.61e-17;41!UBERON:0000956;1.25e-16;25!UBERON:0000203;1.25e-16;25!UBERON:0002619;7.19e-16;22!UBERON:0000073;4.01e-15;53!UBERON:0002616;4.01e-15;53!UBERON:0001950;1.59e-14;20!UBERON:0000955;1.09e-10;68!UBERON:0001017;4.19e-10;75!UBERON:0001016;4.67e-10;83!UBERON:0007023;5.85e-08;114!UBERON:0000922;5.01e-07;49!UBERON:0002420;7.13e-07;9!UBERON:0007245;7.13e-07;9!UBERON:0010009;7.13e-07;9!UBERON:0010011;7.13e-07;9!UBERON:0000454;7.13e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.53e-29,114;UBERON:0001049,2.30e-27,56;UBERON:0005068,2.30e-27,56;UBERON:0006241,2.30e-27,56;UBERON:0007135,2.30e-27,56;UBERON:0001016,6.12e-27,89;UBERON:0001017,8.76e-27,81;UBERON:0000073,2.28e-26,53;UBERON:0002616,2.28e-26,53;UBERON:0002780,1.72e-23,41;UBERON:0001890,1.72e-23,41;UBERON:0003080,1.72e-23,41;UBERON:0006240,1.72e-23,41;UBERON:0002346,1.86e-22,86;UBERON:0003075,4.00e-22,82;UBERON:0007284,4.00e-22,82;UBERON:0000955,1.49e-21,68;UBERON:0006238,1.49e-21,68;UBERON:0001893,1.59e-21,34;UBERON:0001869,3.09e-21,32;UBERON:0003528,1.00e-20,34;UBERON:0002020,1.00e-20,34;UBERON:0002791,1.28e-20,32;UBERON:0003056,1.77e-18,61;UBERON:0000956,1.32e-16,25;UBERON:0000203,1.32e-16,25;UBERON:0002619,8.55e-16,22;UBERON:0010371,8.95e-15,104;UBERON:0001950,1.84e-14,20;UBERON:0011216,3.95e-11,223;UBERON:0010314,7.94e-11,132;UBERON:0004121,1.25e-10,171;UBERON:0000924,1.25e-10,171;UBERON:0006601,1.25e-10,171;UBERON:0002420,5.99e-07,9;UBERON:0007245,5.99e-07,9;UBERON:0010009,5.99e-07,9;UBERON:0010011,5.99e-07,9;UBERON:0000454,5.99e-07,9 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0.873765488520689,0.263766978228454,0.495065411840187,0,1.34465029290355,0.602694528023977,0.730310090387373,0,1.96993692922861,1.42800483870977,4.70182082217132,5.43848375549008,3.83248390204076,5.52387614217132,0.687720651731561,0.985207073399349,0.944529375764151,5.50709987588466,9.59573495243032,3.09632246632152,0,0,0,5.50017124120142,1.56386155736164,7.63361142270603,3.87796785972314,3.60980005446255,3.68918480216948,1.56740831967947,3.56283032620878,1.03030227053675,1.16318591023652,0,0.727752183563449,0.464858073811369,0.822335776043652,0.929119112685311,0.28769239232215,0.256160706529101,0.709446689665756,0.344745680736619,0,2.70852973188684,0.188242339542605,0.272906150057846,0,0.612167784741805,0.320929027076094,0.639337125799041,0.329851300186716,0.398927315243264,0.426224750532694,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0.65156653411535,0.605399502633369,0.368277635987565,0.632924774881769,0.422510572623884,0.212604299965044,0.209658645508376,0.673971786878971,0.600707571366025,0.964353520182481,0.285012743741249,0.19891667719909,0.365328307529268,7.03984977845291,15.2918811153397,7.11607403090844,6.40095333849761,10.0098996759003,16.0930683187255,5.94940385506376,12.4026988089597,7.96898156753228,5.87237189370939,6.11637165000366,5.28685314316103,2.80254281490768,4.74091352595139,0.983548850569165,2.35806457649499,4.5232329779892,2.17342444007882,0.32592226663359,2.8406868344084,7.79306913631645,3.56513462032555,2.3568472597987,2.87994062958707,4.33286182024025,2.30564375506215,2.21100890851793,5.75532666112866,3.59255023121603,4.05724320029073,0.889719378972363,0.267540828089713,1.04535523804977,3.96582699441482,4.98186641682498,3.77990190030893,3.03623630423403,5.41561204350964,5.85975108470777,6.65316431113862,2.40920190524436,3.07167866770604,9.99445812418767,6.39298580518846,11.4957919568947,9.67712367478716,11.2324882229073,5.79297615531196,0,0,0.767175371061182,1.80719576192283,0.50133791063589,0.434539556882471,1.5905718941022,0.973269740605272,2.9305793320861,0.886917589850256,2.72287835648691,8.90657713384446,0,0,2.27183175558278,1.39303789839414,3.0580330919339,16.9328343256793,24.5957811635455,8.54352253057999,2.78267370313387,0,1.73570250803797,2.26123176769604,0,0.550236083880135,1.46296476575767,4.13466814670926,2.13459757612026,4.68608857870538,2.81980521976403,0.760272105718513,6.83373761134875,0.367663080345869,0.81014194788176,2.76829157680647,2.91888184414021,2.59006405111641,3.06633274931766,0.949265659568129,4.03043836646896,0,0,0,0.496971951695318,0.506522046658319,0.264818361626438,0,0.709336764396714,0.560677600142307,0,0.24666754841716,1.24484414159907,0.134710672069688,0,0.908144565869588,0,0,0,0,0,0.469737994575059,0.161872944368132,0.280901613404497,0,0.737005903870608,0.103325781175765,0,0.741800787835671,0,0,0.336672227908132,1.37630371859161,0,1.31693286264251,0.30648779579902,2.10333282469236,0.680593098960126,0.179389635688862,1.06778694409284,0,0,0.206105058476878,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.460249493211497,0,0.355009592516614,0.403008392910561,0.339121184620975,0,0,0,6.83052754325734,3.97589304964456,5.11253348625881,5.18305275076852,3.28017106138317,4.01475094983413,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0,0.217879444092406,0.237270619111097,0.134831308160164,0,0,2.21446636387394,0,0.4115740113314,0,2.53510069643662,2.94848165003288,4.13552934676983,15.8926715789274,1.35287282397425,0.686271241194102,0,0,0.100528972411631,0,0,0,4.3299402607582,2.31860809950154,0.352226082707465,2.7429625074604,2.31492756288305,1.52203321787679,2.37061319387782,2.57545848628462,0.738651018262192,0.702012795417713,0.594524649154913,0,0.16798212819886,0,0,0,0.766765358330422,0.985326475791887,1.76096868026452,6.63449969730471,6.3412779503463,6.43836410474538,0.507983154337352,0.381988425558278,0,0,0.514137463516618,0,0.571652865261156,0.336393253036082,0.43596006883328,0.36669142910475,0.517086863031111,0,0,0.531876233169741,0,0.514414748524284,0,0,0.857867961948885,0,0.823240336780769,0,0.710783897485092,0.791951872933429,0,0,0.599837947092342,0,0,0,0,0,0,0,0.205476322550383,0.716243852959582,11.5447698313333,10.836691811106,12.7220269167115,13.9893909544926,4.06551398755941,11.712586847186,8.50617694055465,11.3911060427357,10.8449587781038,0,0,2.48649308061621,1.59498939234882,2.00068208423871,0.813795071099207,1.45579603071565,0.535286966391485,0.473107245101804,1.28855556491985,2.40756879782175,2.27407504055985,1.03473071292505,0.664225598535437,1.29058417979192,0,3.52442083432933,2.05886054286514,2.48121631347465,3.45142721309787,8.32474950866866,0.303127571446259,0,0.604780586659361,0.248107807818777,0.61384789315225,0,0,1.02341449813341,0,0,0,0.355123450626254,0.0821271560138091,0,0,1.32945394550784,0.40101294060657,0,0.34444334449382,0.364182336013434,0.655622074797121,2.25599806453706,2.23344477602803,2.35304930753057,0,1.68882606228601,1.13733384070897,1.53084334748864,0.863663664408557,9.25363516141736,1.35473218771926,5.01689773854853,0.509752546090077,0.831076008928724,2.46262230194396,0.438519753291869,0.261435451024901,1.79515087581472,4.92021968549559,1.30151357865721,2.67906630284078,3.57120912791539,1.89771849817352,0,0,0,1.16004861950546,0.308097234229289,0.15350367472613,0.413509717453592,0.322260734604821,0.580066775656914,0.511359764496605,2.22580089116843,0,0,0.127612712494584,0.10115778085555,0.929691098594572,0.62962469366128,0,1.23213432070436,0,0,0.18532421910392,0.572499546967965,0.372158369359667,0.316379424718726,0.190630193923825,0.767693373934002,0.42793898803392,1.27281299170375,0,0,0,0.706874414074119,0.606547444719948,0,0,0,0.243713489631284,0,0.272999822815972,1.1312434556297,2.26016233240486,1.10273068709225,0.66343897524122,0,0,1.9676842561399,0.405820753925408,0.92947049429925,0.281695602532241,1.00387946542836,0.196498082026242,0,0,1.05553817648832,0.329294892959902,0.75894634753143,2.44954304171488,0.0962221127255121,0.670302275535787,0,2.7301702225266,0,1.68471475667626,0,0.229723400206959,2.53723804616085,2.29391162142713,5.12682468456746,5.95579438644473,4.11362273086194,2.59389324477087,2.70015718619057,8.72437693923697,0.747768497892312,0.962479855263359,1.47024129588619,2.41544127663434,9.52176805644536,11.8806878391852,5.7393458182376,0.399158742865633,4.0216127727797,2.54008299268659,1.94773164164733,3.36956613736151,8.21644844519492,0.626719583092093,10.0253790836027,1.69291777801603,2.56940920165919,2.21979677910152,1.70338495076131,0.687010689511529,0.307240764308458,0.447352215784832,0.834245708559542,0.390776190804081,0,0,0.270455678475983,10.9913749439281,1.4098700508785,0,2.05111450980652,3.39809460898638,19.9483657856686,3.12549761487054,0.71623345421307,2.96964680832639,1.84296421259539,19.882952955326,18.0056853005456,2.56010021552684,1.15362711958732,14.9899039770875,6.5751836122853,4.42054264849836,4.28285671352269,0.920418142519393,0.123084805461069,1.24415835064723,0.539210106883961,0.179021174675609,4.60415133204185,3.84709281984041,14.3689855408164,1.11136990144637,15.5093239375235,9.64788220883253,75.8532432404538,3.38556089410803,3.23601999985924,2.17499872630438,0,3.55955110409873,4.72775363535873,7.92909758455369,5.54048765428183,11.285624670664,29.2294657318567,39.0732461146322,12.2065389053667,20.5677423472078,10.9352619012813,12.9437384320844,0.544692317594951,0.557694977114413,4.00141344219745,1.36730467016401,0.46112780877612,1.34636466614658,0.651884231532048,1.5950057986596,0.183195186803725,1.06606955203727,7.15353087370155,3.1396051279005,1.66211681900156,0,0.588187602953219,0.503464760927528,0.37950746544837,1.90723894776454,3.16497096792041,0.163232808159148,0,6.70804783200482,7.96209544862804,1.68069372556344,7.33236173920351,0.296521128680622,0.741383633679017,0.939797545549098,5.25728837249281,5.61804353109152,11.2446933948163,2.55436704901932,0.782658475728359,2.42780379534093,0.789168805698781,7.25944296291983,61.5206250877285,2.52746318513952,0.751617097072463,2.07376382794494,0.664653872707185,1.98595173525299,1.88359751044335,1.19472429772959,0.853828638089378,5.96301093956496,0.520679215005393,0.195984794828755,0.609414446062818,1.39781334593624,3.0957485844891,0.290268993867255,0.511625219603299,0.246346371159628,2.23074737923365,1.1473296469895,7.45736444575757,0.411125773940253,0.19871461170299,11.5858756599258,3.32437350649165,0.64127056201227,4.26905989478705,1.79828648623917,0.864542502924636,1.94712213482057,2.74551996579143,0,2.48505071130865,0.707082103850386,0.951329442515298,1.46443984837266,2.3459590056354,0.866851769704557,10.8075651967762,6.70836356570766,12.7746588066972,2.14882720709979,1.8402114799552,5.86493042671734,2.97908551215189,0.717873024576814,2.99518500748487,5.15071257763885,3.79391477651183,10.4134382354426,0,0,0,0.0824158583811665,0.471824806979294,0.393709926058995,0,12.7236750369489,13.0755269867113,3.85807556316046,5.22649859069488,3.73896304226267,2.92466059016951,4.6428117273477,16.7668776376148,0,1.18208560948797,8.55009786600469,0.422401346077626,0,4.03021914370835,3.57347663186684,4.63464379255802,2.5426853765475,0.542999601753713,0,0.653174720218818,4.7892076624995,1.4776653734881,0.170388021785422,2.37955392192264,1.90517903781507,1.32506888912221,3.23207390903876,3.04134984008187,0,2.81926008926669,3.52398461473392,3.14408610199332,3.72815149812476,2.48083010905975,0.197611631897944,1.21792598380896,0.638341257770182,4.89616023032527,1.7548292581589,2.45076461410769,4.26234419922746,5.18278517625773,11.5188863395708,13.178836609412,10.01527445652,4.58727356552057,6.21202688606373,3.29110935589332,13.8348634936231,0.74988244777264,1.06154382279153,0,0.705797459094515,7.02502358710322,8.84018274526033,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0.899606224327209,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0,0.545545977607678,0,0,0.398095888698616,1.20008329398946,0.686791410365586,0,0,0.963099152036517,3.21662387062389,1.04397716786085,0,0.231522474323834,0.97894681802587,0.537266523244462,0,0.657852148736121,0.530067437837643,0,0,2.04993214870357,0,0.607719912354764,8.71028147755904,4.48178710330594,4.91599909159443,3.43487327937273,2.29326894192489,0,0.211312123358627,3.79976052124367,1.06691729694141,1.03328987796489,1.70254786070051,0.184105950251841,0,1.86623178009892,14.5799583286163,2.372145850727,3.14531883711793,8.6275614171691,3.22491806912648,11.6916206055926,3.47020139925206,5.58644917973244,0.954013051960256,19.0845422903033,0.80057074828547,2.46873160583479,0.6124909547064,18.4980168277803,9.91876034279095,6.38535436228605,12.9223309471676,77.1339390438457,8.78297106295567,13.4024785874436,9.99385941814081,0.196295437002051,0.825788063434183,0.183428598521679,0.115525666150338,1.1441462864015,0.690359926060101,0.397832444232549,1.72983755203292,0.80682027481408,1.56302802246618,0.785720083444267,1.80149109261106,2.36569737947272,9.86048735428562,9.37293718336617,9.0942190460521,9.57578733927993,48.1337831936033,1.64477330057155,1.98484471355718,0.527613733078862,0.383287282918786,1.07140367175657,7.39824188881413,3.64179362541979,5.00856820972855,0.443511850813194,1.15233987555779,2.91529616043611,2.71878931907327,9.99746158155306,2.12748913591143,0.444925607568277,3.3752029925721,32.0515803428644,0.280272163313789,16.4368569691709,0.647782773655864,6.21077194253165,4.78892845983597,10.2708847626272,0.464965701472501,1.39086617842064,6.41369091784202,0,0.17071847709395,0.691259661814092,0,0,0,1.69354820076372,4.81124423942505,0.31020638566432,0,1.90154234056247,1.07965256976767,0,3.88457302312737,8.93166419649349,24.3561030581022,8.74279787506451,5.61454712309054,10.1464895332298,8.44332644520737,2.14597555874024,9.34494392336148,8.45391923973372,1.23478652972711,4.80831033108706,4.23285566725371,2.94177986104687,0.942706188406504,3.14093547383912,3.86160320425212,11.8343603723352,0.169927114687817,4.32326022707326,9.34639375616869,0.399764623699716,0.178553938605658,0,0.401206833445841,5.11235471772562,0.917458566809082,2.72345207987757,1.73548718412503,14.1422299597103,102.106061539648,3.7031878836078,0.371995018166751,1.38652688589425,0.865253124247578,2.3971620718665,1.85751472338282,2.28057301820587,1.1218771271618,4.27547848424897,0.735159196278759,5.51556586443225,6.82008283964155,16.3458119395269,5.80418607621146,7.86090768550404,2.34557380091079,9.9987061214771,11.3676481311371,17.6292188600236,1.00918676322552,2.80047496423926,4.24446096812261,3.9189014621453,5.13349951627922,2.42467390852515,1.72133292942423,4.65724499164419,5.45401899693529,5.01618525625263,1.9307228228694,1.70667884002515,2.34640942403454,1.95586310692586,4.47585796147312,1.33151354837103,6.64203518850387,0.320568492303233 | |||
|short_description=p1@YPEL1 | |||
}} |
Revision as of 14:45, 21 January 2014
Short description: | p1@YPEL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_YPEL1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000339468, NM_013313, uc002zvl.2, uc002zvm.2_5end |
EntrezGene: | YPEL1 |
HGNC: | 12845 |
UniProt: | O60688 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.57e-11 | 53 |
common lymphoid progenitor | 8.57e-11 | 53 |
lymphoid lineage restricted progenitor cell | 1.02e-10 | 52 |
T cell | 2.01e-07 | 25 |
pro-T cell | 2.01e-07 | 25 |
B cell | 3.04e-07 | 14 |