FFCP PHASE1:Mm9::chr11:42233203..42233221,+: Difference between revisions
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{{FFCP|EntrezGene=14401|HGNC=|MCL_coexpression_id=1|UniProt=P63137|association_with_transcript=-37bp_to_ENSMUST00000007797,ENSMUST00000169077,NM_008070,uc007imi.1_5end|description=CAGE_peak_6_at_Gabrb2_5end|id=chr11:42233203..42233221,+|ontology_enrichment_celltype=CL:0000117!5.02e-13!23;CL:0000337!5.02e-13!23;CL:0000540!5.11e-09!33;CL:0000047!5.11e-09!33;CL:0000031!5.11e-09!33;CL:0000404!5.11e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.72e-08,23;CL:0000337,2.72e-08,23;CL:0002610,7.40e-08,3;CL:0002614,1.88e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.84e-25!52;UBERON:0005068!6.84e-25!52;UBERON:0006241!6.84e-25!52;UBERON:0007135!6.84e-25!52;UBERON:0001017!3.37e-24!73;UBERON:0005743!3.37e-24!73;UBERON:0000033!6.15e-24!63;UBERON:0000955!6.74e-24!50;UBERON:0006238!6.74e-24!50;UBERON:0002346!8.61e-24!71;UBERON:0003075!8.61e-24!71;UBERON:0007284!8.61e-24!71;UBERON:0000073!4.38e-23!75;UBERON:0001016!4.38e-23!75;UBERON:0002616!5.65e-23!49;UBERON:0002020!2.32e-22!34;UBERON:0003056!2.09e-20!49;UBERON:0002791!1.11e-18!29;UBERON:0003528!1.11e-18!29;UBERON:0001893!1.11e-18!29;UBERON:0004121!2.92e-18!102;UBERON:0000924!2.92e-18!102;UBERON:0006601!2.92e-18!102;UBERON:0003080!8.29e-18!40;UBERON:0002780!8.45e-17!39;UBERON:0001890!8.45e-17!39;UBERON:0006240!8.45e-17!39;UBERON:0007811!2.27e-13!86;UBERON:0000153!5.01e-13!94;UBERON:0002619!1.20e-12!17;UBERON:0000956!5.04e-12!21;UBERON:0001869!5.04e-12!21;UBERON:0000203!5.04e-12!21;UBERON:0002021!1.99e-11!10;UBERON:0000411!1.99e-11!10;UBERON:0001950!1.99e-11!10;UBERON:0002420!4.46e-08!8;UBERON:0007245!4.46e-08!8;UBERON:0010009!4.46e-08!8;UBERON:0010011!4.46e-08!8;UBERON:0000454!4.46e-08!8;UBERON:0003076!1.08e-07!12;UBERON:0003057!1.08e-07!12;UBERON:0000025!2.57e-07!114;UBERON:0002298!4.79e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.16e-37,54;UBERON:0000955,7.00e-35,47;UBERON:0006238,7.00e-35,47;UBERON:0001017,2.37e-34,73;UBERON:0001049,1.79e-33,52;UBERON:0005068,1.79e-33,52;UBERON:0006241,1.79e-33,52;UBERON:0007135,1.79e-33,52;UBERON:0001016,2.93e-33,75;UBERON:0002616,5.62e-33,46;UBERON:0003528,1.24e-27,29;UBERON:0002791,1.24e-27,29;UBERON:0001893,1.24e-27,29;UBERON:0003080,1.63e-26,40;UBERON:0002346,4.73e-26,64;UBERON:0003075,4.73e-26,64;UBERON:0007284,4.73e-26,64;UBERON:0002020,1.62e-25,34;UBERON:0004121,7.34e-25,95;UBERON:0000924,7.34e-25,95;UBERON:0006601,7.34e-25,95;UBERON:0002021,1.00e-24,10;UBERON:0000411,1.00e-24,10;UBERON:0001950,1.00e-24,10;UBERON:0002780,1.82e-24,39;UBERON:0001890,1.82e-24,39;UBERON:0006240,1.82e-24,39;UBERON:0010371,4.40e-22,73;UBERON:0003056,1.05e-20,49;UBERON:0002619,9.14e-20,17;UBERON:0000956,1.81e-18,21;UBERON:0001869,1.81e-18,21;UBERON:0000203,1.81e-18,21;UBERON:0010314,2.99e-16,92;UBERON:0000025,6.35e-12,114;UBERON:0004111,9.75e-11,122;UBERON:0002420,2.77e-10,8;UBERON:0007245,2.77e-10,8;UBERON:0010009,2.77e-10,8;UBERON:0010011,2.77e-10,8;UBERON:0000454,2.77e-10,8;UBERON:0002950,5.18e-10,4;UBERON:0001891,5.18e-10,4;UBERON:0009616,5.18e-10,4;UBERON:0010286,5.18e-10,4;UBERON:0011216,1.12e-08,194;UBERON:0004684,7.40e-08,3;UBERON:0002275,7.40e-08,3;UBERON:0004733,1.85e-07,6;UBERON:0004732,1.85e-07,6;UBERON:0002028,1.85e-07,6;UBERON:0007277,1.85e-07,6;UBERON:0002038,1.88e-07,3;UBERON:0009663,1.88e-07,3;UBERON:0009661,1.88e-07,3;UBERON:0000125,1.88e-07,3;UBERON:0002308,1.88e-07,3;UBERON:0003076,2.74e-07,12;UBERON:0003057,2.74e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,0.662605622854841,0.857435594504678,0.479227355091182,0,1.10115880999389,7.40586560894089,1.53606533256243,0.791317726381163,0.274462930807229,1.04182674111352,1.11673199600552,1.68828783009504,1.83357897332172,1.76777151284201,0.711858403995515,0.186399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,8.19786231632332,7.95897485891129,0,0,0,0,8.08869452786043,6.8625090422794,3.5183218591602,7.30062144807561,8.69432554923124,6.2336413367868,6.00292673350703,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.204109497453984,0.512454881139399,0.187403449119458,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,5.67782861123144,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,2.88991061978026,4.57125577709592,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0.337912250981556,0.352071715937262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,3.3885110557024,4.60325236507177,3.43737308063638,2.23409137046794,3.42541259885321,3.7769694869485,10.8003600037089,4.5032120322422,7.70342095273148,6.21312374102184,0,0,0.170733605754134,0,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.423073039458382,0,0.526139422875686,0,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.467863216890817,0,0,0.220591419119515,0|short_description=p6@Gabrb2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14401 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P63137 | |||
|association_with_transcript=-37bp_to_ENSMUST00000007797,ENSMUST00000169077,NM_008070,uc007imi.1_5end | |||
|cluster_id=chr11:42233203..42233221,+ | |||
|description=CAGE_peak_6_at_Gabrb2_5end | |||
|id=chr11:42233203..42233221,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.02e-13!23;CL:0000337!5.02e-13!23;CL:0000540!5.11e-09!33;CL:0000047!5.11e-09!33;CL:0000031!5.11e-09!33;CL:0000404!5.11e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.72e-08,23;CL:0000337,2.72e-08,23;CL:0002610,7.40e-08,3;CL:0002614,1.88e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.84e-25!52;UBERON:0005068!6.84e-25!52;UBERON:0006241!6.84e-25!52;UBERON:0007135!6.84e-25!52;UBERON:0001017!3.37e-24!73;UBERON:0005743!3.37e-24!73;UBERON:0000033!6.15e-24!63;UBERON:0000955!6.74e-24!50;UBERON:0006238!6.74e-24!50;UBERON:0002346!8.61e-24!71;UBERON:0003075!8.61e-24!71;UBERON:0007284!8.61e-24!71;UBERON:0000073!4.38e-23!75;UBERON:0001016!4.38e-23!75;UBERON:0002616!5.65e-23!49;UBERON:0002020!2.32e-22!34;UBERON:0003056!2.09e-20!49;UBERON:0002791!1.11e-18!29;UBERON:0003528!1.11e-18!29;UBERON:0001893!1.11e-18!29;UBERON:0004121!2.92e-18!102;UBERON:0000924!2.92e-18!102;UBERON:0006601!2.92e-18!102;UBERON:0003080!8.29e-18!40;UBERON:0002780!8.45e-17!39;UBERON:0001890!8.45e-17!39;UBERON:0006240!8.45e-17!39;UBERON:0007811!2.27e-13!86;UBERON:0000153!5.01e-13!94;UBERON:0002619!1.20e-12!17;UBERON:0000956!5.04e-12!21;UBERON:0001869!5.04e-12!21;UBERON:0000203!5.04e-12!21;UBERON:0002021!1.99e-11!10;UBERON:0000411!1.99e-11!10;UBERON:0001950!1.99e-11!10;UBERON:0002420!4.46e-08!8;UBERON:0007245!4.46e-08!8;UBERON:0010009!4.46e-08!8;UBERON:0010011!4.46e-08!8;UBERON:0000454!4.46e-08!8;UBERON:0003076!1.08e-07!12;UBERON:0003057!1.08e-07!12;UBERON:0000025!2.57e-07!114;UBERON:0002298!4.79e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.16e-37,54;UBERON:0000955,7.00e-35,47;UBERON:0006238,7.00e-35,47;UBERON:0001017,2.37e-34,73;UBERON:0001049,1.79e-33,52;UBERON:0005068,1.79e-33,52;UBERON:0006241,1.79e-33,52;UBERON:0007135,1.79e-33,52;UBERON:0001016,2.93e-33,75;UBERON:0002616,5.62e-33,46;UBERON:0003528,1.24e-27,29;UBERON:0002791,1.24e-27,29;UBERON:0001893,1.24e-27,29;UBERON:0003080,1.63e-26,40;UBERON:0002346,4.73e-26,64;UBERON:0003075,4.73e-26,64;UBERON:0007284,4.73e-26,64;UBERON:0002020,1.62e-25,34;UBERON:0004121,7.34e-25,95;UBERON:0000924,7.34e-25,95;UBERON:0006601,7.34e-25,95;UBERON:0002021,1.00e-24,10;UBERON:0000411,1.00e-24,10;UBERON:0001950,1.00e-24,10;UBERON:0002780,1.82e-24,39;UBERON:0001890,1.82e-24,39;UBERON:0006240,1.82e-24,39;UBERON:0010371,4.40e-22,73;UBERON:0003056,1.05e-20,49;UBERON:0002619,9.14e-20,17;UBERON:0000956,1.81e-18,21;UBERON:0001869,1.81e-18,21;UBERON:0000203,1.81e-18,21;UBERON:0010314,2.99e-16,92;UBERON:0000025,6.35e-12,114;UBERON:0004111,9.75e-11,122;UBERON:0002420,2.77e-10,8;UBERON:0007245,2.77e-10,8;UBERON:0010009,2.77e-10,8;UBERON:0010011,2.77e-10,8;UBERON:0000454,2.77e-10,8;UBERON:0002950,5.18e-10,4;UBERON:0001891,5.18e-10,4;UBERON:0009616,5.18e-10,4;UBERON:0010286,5.18e-10,4;UBERON:0011216,1.12e-08,194;UBERON:0004684,7.40e-08,3;UBERON:0002275,7.40e-08,3;UBERON:0004733,1.85e-07,6;UBERON:0004732,1.85e-07,6;UBERON:0002028,1.85e-07,6;UBERON:0007277,1.85e-07,6;UBERON:0002038,1.88e-07,3;UBERON:0009663,1.88e-07,3;UBERON:0009661,1.88e-07,3;UBERON:0000125,1.88e-07,3;UBERON:0002308,1.88e-07,3;UBERON:0003076,2.74e-07,12;UBERON:0003057,2.74e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0.103689612308478,0,0,0.856952953211411,0.662605622854841,0.857435594504678,0.479227355091182,0,1.10115880999389,7.40586560894089,1.53606533256243,0.791317726381163,0.274462930807229,1.04182674111352,1.11673199600552,1.68828783009504,1.83357897332172,1.76777151284201,0.711858403995515,0.186399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,8.19786231632332,7.95897485891129,0,0,0,0,8.08869452786043,6.8625090422794,3.5183218591602,7.30062144807561,8.69432554923124,6.2336413367868,6.00292673350703,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.204109497453984,0.512454881139399,0.187403449119458,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,5.67782861123144,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,2.88991061978026,4.57125577709592,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0.337912250981556,0.352071715937262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,3.3885110557024,4.60325236507177,3.43737308063638,2.23409137046794,3.42541259885321,3.7769694869485,10.8003600037089,4.5032120322422,7.70342095273148,6.21312374102184,0,0,0.170733605754134,0,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.423073039458382,0,0.526139422875686,0,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.467863216890817,0,0,0.220591419119515,0 | |||
|short_description=p6@Gabrb2 | |||
}} |
Revision as of 21:59, 5 August 2015
Short description: | p6@Gabrb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Gabrb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -37bp_to_ENSMUST00000007797, ENSMUST00000169077, NM_008070, uc007imi.1_5end |
EntrezGene: | 14401 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.72e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.72e-08 | 23 |
raphe nuclei neuron | 7.40e-08 | 3 |
neuron of the substantia nigra | 1.88e-07 | 3 |