FFCP PHASE1:Mm9::chr12:62625523..62625541,+: Difference between revisions
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{{FFCP|EntrezGene=238205|HGNC=|MCL_coexpression_id=1|UniProt=Q8BXA0|association_with_transcript=-77bp_to_NM_178714,uc007nqm.1,uc007nqn.1_5end|description=CAGE_peak_3_at_Lrfn5_5end|id=chr12:62625523..62625541,+|ontology_enrichment_celltype=CL:0000117!4.49e-18!23;CL:0000337!4.49e-18!23;CL:0000540!2.67e-12!33;CL:0000047!2.67e-12!33;CL:0000031!2.67e-12!33;CL:0000404!2.67e-12!33;CL:0000393!5.98e-09!39;CL:0000211!5.98e-09!39;CL:0000221!4.05e-08!44;CL:0000133!4.05e-08!44;CL:0002319!8.15e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-27,23;CL:0000337,1.08e-27,23;CL:0000540,2.42e-17,33;CL:0000047,2.42e-17,33;CL:0000031,2.42e-17,33;CL:0000404,2.42e-17,33;CL:0000393,1.02e-13,39;CL:0000211,1.02e-13,39;CL:0002319,7.08e-12,43;CL:0000221,1.80e-11,44;CL:0000133,1.80e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.01e-29!52;UBERON:0005068!1.01e-29!52;UBERON:0006241!1.01e-29!52;UBERON:0007135!1.01e-29!52;UBERON:0000033!9.14e-29!63;UBERON:0000955!4.23e-28!50;UBERON:0006238!4.23e-28!50;UBERON:0001017!1.68e-27!73;UBERON:0005743!1.68e-27!73;UBERON:0002616!2.30e-27!49;UBERON:0000073!5.60e-27!75;UBERON:0001016!5.60e-27!75;UBERON:0003056!2.62e-25!49;UBERON:0002346!8.23e-25!71;UBERON:0003075!8.23e-25!71;UBERON:0007284!8.23e-25!71;UBERON:0002020!2.29e-24!34;UBERON:0003080!6.20e-24!40;UBERON:0002780!6.43e-23!39;UBERON:0001890!6.43e-23!39;UBERON:0006240!6.43e-23!39;UBERON:0004121!2.58e-21!102;UBERON:0000924!2.58e-21!102;UBERON:0006601!2.58e-21!102;UBERON:0002791!3.20e-20!29;UBERON:0003528!3.20e-20!29;UBERON:0001893!3.20e-20!29;UBERON:0007811!1.52e-15!86;UBERON:0000956!5.49e-14!21;UBERON:0001869!5.49e-14!21;UBERON:0000203!5.49e-14!21;UBERON:0000153!1.32e-12!94;UBERON:0002619!3.52e-11!17;UBERON:0002021!1.30e-10!10;UBERON:0000411!1.30e-10!10;UBERON:0001950!1.30e-10!10;UBERON:0002420!1.88e-07!8;UBERON:0007245!1.88e-07!8;UBERON:0010009!1.88e-07!8;UBERON:0010011!1.88e-07!8;UBERON:0000454!1.88e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.77e-42,54;UBERON:0002020,1.46e-39,34;UBERON:0001049,9.61e-39,52;UBERON:0005068,9.61e-39,52;UBERON:0006241,9.61e-39,52;UBERON:0007135,9.61e-39,52;UBERON:0001017,6.81e-37,73;UBERON:0001016,1.42e-35,75;UBERON:0003528,1.96e-32,29;UBERON:0002791,1.96e-32,29;UBERON:0001893,1.96e-32,29;UBERON:0000955,7.77e-32,47;UBERON:0006238,7.77e-32,47;UBERON:0002616,1.11e-30,46;UBERON:0003080,5.94e-30,40;UBERON:0002346,2.27e-29,64;UBERON:0003075,2.27e-29,64;UBERON:0007284,2.27e-29,64;UBERON:0002780,2.40e-28,39;UBERON:0001890,2.40e-28,39;UBERON:0006240,2.40e-28,39;UBERON:0004121,1.91e-25,95;UBERON:0000924,1.91e-25,95;UBERON:0006601,1.91e-25,95;UBERON:0010371,2.24e-24,73;UBERON:0003056,8.63e-23,49;UBERON:0000956,9.61e-22,21;UBERON:0001869,9.61e-22,21;UBERON:0000203,9.61e-22,21;UBERON:0002021,4.09e-17,10;UBERON:0000411,4.09e-17,10;UBERON:0001950,4.09e-17,10;UBERON:0010314,4.47e-17,92;UBERON:0002619,6.04e-17,17;UBERON:0000025,1.01e-11,114;UBERON:0002420,1.08e-11,8;UBERON:0007245,1.08e-11,8;UBERON:0010009,1.08e-11,8;UBERON:0010011,1.08e-11,8;UBERON:0000454,1.08e-11,8;UBERON:0004111,2.83e-10,122;UBERON:0002240,3.61e-09,6;UBERON:0005174,3.61e-09,6;UBERON:0001137,3.61e-09,6;UBERON:0003076,8.01e-09,12;UBERON:0003057,8.01e-09,12;UBERON:0001948,4.40e-08,5;UBERON:0002315,4.40e-08,5;UBERON:0000369,7.90e-08,5;UBERON:0002435,7.90e-08,5;UBERON:0000204,7.90e-08,5;UBERON:0010082,7.90e-08,5;UBERON:0002950,4.30e-07,4;UBERON:0001891,4.30e-07,4;UBERON:0009616,4.30e-07,4;UBERON:0010286,4.30e-07,4|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,2.42779753031517,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,2.28117147078651,1.21505344498522,2.52389953621658,1.71390590642282,3.97563373712904,1.95985278743926,1.24599112323707,0.919218786610021,4.40463523997555,4.34136949489638,3.84016333140609,3.29715719325485,2.65314166446988,5.2091337055676,2.23346399201105,5.06486349028512,3.51435969886663,4.41942878210502,3.70166370077668,4.10078780815661,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,8.83764772488454,3.66000482254901,1.63350657746724,5.38855392596057,3.58001640262463,4.98691306942944,5.02947915510049,0.101839363850316,0,0,0.420883711772948,0,0.229902104433473,0.180062129805349,0.60281927134286,0.340182495756639,0.384341160854549,0.468508622798644,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83666881697493,1.44066457330998,0,0,0.213288250535234,0,0.515469845288373,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,2.69586879162067,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,1.92792789853084,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0.36012218806262,0.129358683782755,0.428674070063185,0,0.178368817602071,0.822745103010605,0.608929898229199,0,0,0,0,0,0.120625849856312,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.598066184175915,0.496375471371293,0.972255941720238,0.258319646955462,0.844780627453891,0.938857909166032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,7.82552902062201,4.01026859407578,6.35856774671644,8.22099023724771,3.7769694869485,5.40018000185445,5.85417564191487,8.15656336171568,7.7664046762773,0.103787347584177,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,0.735374033800057,1.33348036680969,1.03017528619447,0.962757628775446,1.51618327058278,1.01391719956096,1.50901073108861,1.21733959710847,0.640251524048693,0.976402972245426,0.952587382566147,1.39061191133827,1.73618298417335,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,1.1921809497366,0.726732083161643,1.03520318456864,0.592302255241736,1.28049581010941,1.31534855718921,1.35804113845862,2.24456908663095,0.830445126869219,0.591026894253381,0,0.464810523557898,0.771626443924566,1.49886346762768,0.233931608445408,0,0.57386499620653,0,0|short_description=p3@Lrfn5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:238205 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BXA0 | |||
|association_with_transcript=-77bp_to_NM_178714,uc007nqm.1,uc007nqn.1_5end | |||
|cluster_id=chr12:62625523..62625541,+ | |||
|description=CAGE_peak_3_at_Lrfn5_5end | |||
|id=chr12:62625523..62625541,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.49e-18!23;CL:0000337!4.49e-18!23;CL:0000540!2.67e-12!33;CL:0000047!2.67e-12!33;CL:0000031!2.67e-12!33;CL:0000404!2.67e-12!33;CL:0000393!5.98e-09!39;CL:0000211!5.98e-09!39;CL:0000221!4.05e-08!44;CL:0000133!4.05e-08!44;CL:0002319!8.15e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-27,23;CL:0000337,1.08e-27,23;CL:0000540,2.42e-17,33;CL:0000047,2.42e-17,33;CL:0000031,2.42e-17,33;CL:0000404,2.42e-17,33;CL:0000393,1.02e-13,39;CL:0000211,1.02e-13,39;CL:0002319,7.08e-12,43;CL:0000221,1.80e-11,44;CL:0000133,1.80e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.01e-29!52;UBERON:0005068!1.01e-29!52;UBERON:0006241!1.01e-29!52;UBERON:0007135!1.01e-29!52;UBERON:0000033!9.14e-29!63;UBERON:0000955!4.23e-28!50;UBERON:0006238!4.23e-28!50;UBERON:0001017!1.68e-27!73;UBERON:0005743!1.68e-27!73;UBERON:0002616!2.30e-27!49;UBERON:0000073!5.60e-27!75;UBERON:0001016!5.60e-27!75;UBERON:0003056!2.62e-25!49;UBERON:0002346!8.23e-25!71;UBERON:0003075!8.23e-25!71;UBERON:0007284!8.23e-25!71;UBERON:0002020!2.29e-24!34;UBERON:0003080!6.20e-24!40;UBERON:0002780!6.43e-23!39;UBERON:0001890!6.43e-23!39;UBERON:0006240!6.43e-23!39;UBERON:0004121!2.58e-21!102;UBERON:0000924!2.58e-21!102;UBERON:0006601!2.58e-21!102;UBERON:0002791!3.20e-20!29;UBERON:0003528!3.20e-20!29;UBERON:0001893!3.20e-20!29;UBERON:0007811!1.52e-15!86;UBERON:0000956!5.49e-14!21;UBERON:0001869!5.49e-14!21;UBERON:0000203!5.49e-14!21;UBERON:0000153!1.32e-12!94;UBERON:0002619!3.52e-11!17;UBERON:0002021!1.30e-10!10;UBERON:0000411!1.30e-10!10;UBERON:0001950!1.30e-10!10;UBERON:0002420!1.88e-07!8;UBERON:0007245!1.88e-07!8;UBERON:0010009!1.88e-07!8;UBERON:0010011!1.88e-07!8;UBERON:0000454!1.88e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.77e-42,54;UBERON:0002020,1.46e-39,34;UBERON:0001049,9.61e-39,52;UBERON:0005068,9.61e-39,52;UBERON:0006241,9.61e-39,52;UBERON:0007135,9.61e-39,52;UBERON:0001017,6.81e-37,73;UBERON:0001016,1.42e-35,75;UBERON:0003528,1.96e-32,29;UBERON:0002791,1.96e-32,29;UBERON:0001893,1.96e-32,29;UBERON:0000955,7.77e-32,47;UBERON:0006238,7.77e-32,47;UBERON:0002616,1.11e-30,46;UBERON:0003080,5.94e-30,40;UBERON:0002346,2.27e-29,64;UBERON:0003075,2.27e-29,64;UBERON:0007284,2.27e-29,64;UBERON:0002780,2.40e-28,39;UBERON:0001890,2.40e-28,39;UBERON:0006240,2.40e-28,39;UBERON:0004121,1.91e-25,95;UBERON:0000924,1.91e-25,95;UBERON:0006601,1.91e-25,95;UBERON:0010371,2.24e-24,73;UBERON:0003056,8.63e-23,49;UBERON:0000956,9.61e-22,21;UBERON:0001869,9.61e-22,21;UBERON:0000203,9.61e-22,21;UBERON:0002021,4.09e-17,10;UBERON:0000411,4.09e-17,10;UBERON:0001950,4.09e-17,10;UBERON:0010314,4.47e-17,92;UBERON:0002619,6.04e-17,17;UBERON:0000025,1.01e-11,114;UBERON:0002420,1.08e-11,8;UBERON:0007245,1.08e-11,8;UBERON:0010009,1.08e-11,8;UBERON:0010011,1.08e-11,8;UBERON:0000454,1.08e-11,8;UBERON:0004111,2.83e-10,122;UBERON:0002240,3.61e-09,6;UBERON:0005174,3.61e-09,6;UBERON:0001137,3.61e-09,6;UBERON:0003076,8.01e-09,12;UBERON:0003057,8.01e-09,12;UBERON:0001948,4.40e-08,5;UBERON:0002315,4.40e-08,5;UBERON:0000369,7.90e-08,5;UBERON:0002435,7.90e-08,5;UBERON:0000204,7.90e-08,5;UBERON:0010082,7.90e-08,5;UBERON:0002950,4.30e-07,4;UBERON:0001891,4.30e-07,4;UBERON:0009616,4.30e-07,4;UBERON:0010286,4.30e-07,4 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,2.42779753031517,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,2.28117147078651,1.21505344498522,2.52389953621658,1.71390590642282,3.97563373712904,1.95985278743926,1.24599112323707,0.919218786610021,4.40463523997555,4.34136949489638,3.84016333140609,3.29715719325485,2.65314166446988,5.2091337055676,2.23346399201105,5.06486349028512,3.51435969886663,4.41942878210502,3.70166370077668,4.10078780815661,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,8.83764772488454,3.66000482254901,1.63350657746724,5.38855392596057,3.58001640262463,4.98691306942944,5.02947915510049,0.101839363850316,0,0,0.420883711772948,0,0.229902104433473,0.180062129805349,0.60281927134286,0.340182495756639,0.384341160854549,0.468508622798644,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83666881697493,1.44066457330998,0,0,0.213288250535234,0,0.515469845288373,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,2.69586879162067,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,1.92792789853084,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0.36012218806262,0.129358683782755,0.428674070063185,0,0.178368817602071,0.822745103010605,0.608929898229199,0,0,0,0,0,0.120625849856312,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.598066184175915,0.496375471371293,0.972255941720238,0.258319646955462,0.844780627453891,0.938857909166032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,7.82552902062201,4.01026859407578,6.35856774671644,8.22099023724771,3.7769694869485,5.40018000185445,5.85417564191487,8.15656336171568,7.7664046762773,0.103787347584177,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,0.735374033800057,1.33348036680969,1.03017528619447,0.962757628775446,1.51618327058278,1.01391719956096,1.50901073108861,1.21733959710847,0.640251524048693,0.976402972245426,0.952587382566147,1.39061191133827,1.73618298417335,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,1.1921809497366,0.726732083161643,1.03520318456864,0.592302255241736,1.28049581010941,1.31534855718921,1.35804113845862,2.24456908663095,0.830445126869219,0.591026894253381,0,0.464810523557898,0.771626443924566,1.49886346762768,0.233931608445408,0,0.57386499620653,0,0 | |||
|short_description=p3@Lrfn5 | |||
}} |
Revision as of 03:45, 5 August 2015
Short description: | p3@Lrfn5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lrfn5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -77bp_to_NM_178714, uc007nqm.1, uc007nqn.1_5end |
EntrezGene: | 238205 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.08e-27 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-27 | 23 |
neuron | 2.42e-17 | 33 |
neuronal stem cell | 2.42e-17 | 33 |
neuroblast | 2.42e-17 | 33 |
electrically signaling cell | 2.42e-17 | 33 |
electrically responsive cell | 1.02e-13 | 39 |
electrically active cell | 1.02e-13 | 39 |
neural cell | 7.08e-12 | 43 |
ectodermal cell | 1.80e-11 | 44 |
neurectodermal cell | 1.80e-11 | 44 |