FFCP PHASE1:Mm9::chr14:71026645..71026656,-: Difference between revisions
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{{FFCP|EntrezGene=13829|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=207bp_to_uc007uop.1_5end|description=CAGE_peak_13_at_Epb4.9_5end|id=chr14:71026645..71026656,-|ontology_enrichment_celltype=CL:0000117!3.43e-11!23;CL:0000337!3.43e-11!23|ontology_enrichment_celltype_v019_2=CL:0000117,6.96e-12,23;CL:0000337,6.96e-12,23;CL:0000120,1.30e-08,3;CL:0002610,1.30e-08,3;CL:0000540,1.12e-07,33;CL:0000047,1.12e-07,33;CL:0000031,1.12e-07,33;CL:0000404,1.12e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.10e-26!52;UBERON:0005068!5.10e-26!52;UBERON:0006241!5.10e-26!52;UBERON:0007135!5.10e-26!52;UBERON:0000033!2.61e-25!63;UBERON:0000955!5.81e-25!50;UBERON:0006238!5.81e-25!50;UBERON:0002616!5.86e-24!49;UBERON:0001017!3.73e-23!73;UBERON:0005743!3.73e-23!73;UBERON:0000073!5.83e-23!75;UBERON:0001016!5.83e-23!75;UBERON:0002346!1.32e-22!71;UBERON:0003075!1.32e-22!71;UBERON:0007284!1.32e-22!71;UBERON:0003056!1.23e-21!49;UBERON:0004121!5.31e-20!102;UBERON:0000924!5.31e-20!102;UBERON:0006601!5.31e-20!102;UBERON:0003080!6.83e-20!40;UBERON:0002780!6.17e-19!39;UBERON:0001890!6.17e-19!39;UBERON:0006240!6.17e-19!39;UBERON:0002020!3.90e-18!34;UBERON:0007811!4.11e-15!86;UBERON:0002791!1.97e-14!29;UBERON:0003528!1.97e-14!29;UBERON:0001893!1.97e-14!29;UBERON:0000153!5.97e-14!94;UBERON:0002021!4.94e-12!10;UBERON:0000411!4.94e-12!10;UBERON:0001950!4.94e-12!10;UBERON:0000025!1.87e-09!114;UBERON:0004111!2.19e-08!122;UBERON:0000956!2.37e-08!21;UBERON:0001869!2.37e-08!21;UBERON:0000203!2.37e-08!21;UBERON:0002619!3.63e-08!17;UBERON:0002420!5.82e-08!8;UBERON:0007245!5.82e-08!8;UBERON:0010009!5.82e-08!8;UBERON:0010011!5.82e-08!8;UBERON:0000454!5.82e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.55e-32,73;UBERON:0001016,3.61e-31,75;UBERON:0000073,4.97e-31,54;UBERON:0002021,2.95e-29,10;UBERON:0000411,2.95e-29,10;UBERON:0001950,2.95e-29,10;UBERON:0000955,3.08e-28,47;UBERON:0006238,3.08e-28,47;UBERON:0003080,5.74e-28,40;UBERON:0001049,3.46e-27,52;UBERON:0005068,3.46e-27,52;UBERON:0006241,3.46e-27,52;UBERON:0007135,3.46e-27,52;UBERON:0002616,3.19e-26,46;UBERON:0003528,5.19e-26,29;UBERON:0002791,5.19e-26,29;UBERON:0001893,5.19e-26,29;UBERON:0002780,6.85e-26,39;UBERON:0001890,6.85e-26,39;UBERON:0006240,6.85e-26,39;UBERON:0002020,2.93e-24,34;UBERON:0004121,2.03e-23,95;UBERON:0000924,2.03e-23,95;UBERON:0006601,2.03e-23,95;UBERON:0003056,5.48e-22,49;UBERON:0002346,3.84e-21,64;UBERON:0003075,3.84e-21,64;UBERON:0007284,3.84e-21,64;UBERON:0002619,1.26e-19,17;UBERON:0000956,1.19e-18,21;UBERON:0001869,1.19e-18,21;UBERON:0000203,1.19e-18,21;UBERON:0010371,6.55e-18,73;UBERON:0010314,3.69e-13,92;UBERON:0000025,1.23e-09,114;UBERON:0004111,1.14e-08,122;UBERON:0004684,1.30e-08,3;UBERON:0002275,1.30e-08,3;UBERON:0011216,1.79e-08,194;UBERON:0002420,2.07e-08,8;UBERON:0007245,2.07e-08,8;UBERON:0010009,2.07e-08,8;UBERON:0010011,2.07e-08,8;UBERON:0000454,2.07e-08,8;UBERON:0002950,9.64e-07,4;UBERON:0001891,9.64e-07,4;UBERON:0009616,9.64e-07,4;UBERON:0010286,9.64e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,2.53532561402472,0,0.889294796111139,0,0,0,0,0,0,0.405017814995072,0,0.856952953211411,0.662605622854841,0,0,0,2.20231761998777,1.40456071893706,1.53606533256243,0.791317726381163,1.09785172322892,1.56274011167028,0.558365998002762,2.25105044012672,1.22238598221448,1.17851434189467,0.427115042397309,0.372798891650601,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0,0,0.289198713839823,0,0.161766849947409,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,2.54644086988199,7.77751024791665,0.251308704225729,7.99591872884472,7.92717917724025,2.49345653471472,2.27137768294861,0,0,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,1.47202963994889,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0.333690211432188,0.393117990226406,0.449724224769707,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,1.9266070798535,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,1.16422815404479,0.428674070063185,0.532020700926821,0,0.329098041204242,0,0,0,0,0,0,0,0,0.164140899745061,0,1.11255181206306,0,0.206386867963223,0,0.188368457004691,0.410082683163076,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,3.95326289831947,5.06357760157895,5.15605962095457,3.95262319390481,7.53590771747707,6.7985450765073,6.07520250208625,5.85417564191487,8.15656336171568,4.14208249401456,0,0,0.170733605754134,0,0.209613162627982,0.919217542250071,0,0,0.320919209591815,0,0,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0,0.38581844092741,0,0,0.685738504770831,0,0,0,0.282328141245992,0,0,0.263069711437843,0.271608227691724,0,0,0,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p13@Epb4.9}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13829 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=207bp_to_uc007uop.1_5end | |||
|cluster_id=chr14:71026645..71026656,- | |||
|description=CAGE_peak_13_at_Epb4.9_5end | |||
|id=chr14:71026645..71026656,- | |||
|ontology_enrichment_celltype=CL:0000117!3.43e-11!23;CL:0000337!3.43e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.96e-12,23;CL:0000337,6.96e-12,23;CL:0000120,1.30e-08,3;CL:0002610,1.30e-08,3;CL:0000540,1.12e-07,33;CL:0000047,1.12e-07,33;CL:0000031,1.12e-07,33;CL:0000404,1.12e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.10e-26!52;UBERON:0005068!5.10e-26!52;UBERON:0006241!5.10e-26!52;UBERON:0007135!5.10e-26!52;UBERON:0000033!2.61e-25!63;UBERON:0000955!5.81e-25!50;UBERON:0006238!5.81e-25!50;UBERON:0002616!5.86e-24!49;UBERON:0001017!3.73e-23!73;UBERON:0005743!3.73e-23!73;UBERON:0000073!5.83e-23!75;UBERON:0001016!5.83e-23!75;UBERON:0002346!1.32e-22!71;UBERON:0003075!1.32e-22!71;UBERON:0007284!1.32e-22!71;UBERON:0003056!1.23e-21!49;UBERON:0004121!5.31e-20!102;UBERON:0000924!5.31e-20!102;UBERON:0006601!5.31e-20!102;UBERON:0003080!6.83e-20!40;UBERON:0002780!6.17e-19!39;UBERON:0001890!6.17e-19!39;UBERON:0006240!6.17e-19!39;UBERON:0002020!3.90e-18!34;UBERON:0007811!4.11e-15!86;UBERON:0002791!1.97e-14!29;UBERON:0003528!1.97e-14!29;UBERON:0001893!1.97e-14!29;UBERON:0000153!5.97e-14!94;UBERON:0002021!4.94e-12!10;UBERON:0000411!4.94e-12!10;UBERON:0001950!4.94e-12!10;UBERON:0000025!1.87e-09!114;UBERON:0004111!2.19e-08!122;UBERON:0000956!2.37e-08!21;UBERON:0001869!2.37e-08!21;UBERON:0000203!2.37e-08!21;UBERON:0002619!3.63e-08!17;UBERON:0002420!5.82e-08!8;UBERON:0007245!5.82e-08!8;UBERON:0010009!5.82e-08!8;UBERON:0010011!5.82e-08!8;UBERON:0000454!5.82e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.55e-32,73;UBERON:0001016,3.61e-31,75;UBERON:0000073,4.97e-31,54;UBERON:0002021,2.95e-29,10;UBERON:0000411,2.95e-29,10;UBERON:0001950,2.95e-29,10;UBERON:0000955,3.08e-28,47;UBERON:0006238,3.08e-28,47;UBERON:0003080,5.74e-28,40;UBERON:0001049,3.46e-27,52;UBERON:0005068,3.46e-27,52;UBERON:0006241,3.46e-27,52;UBERON:0007135,3.46e-27,52;UBERON:0002616,3.19e-26,46;UBERON:0003528,5.19e-26,29;UBERON:0002791,5.19e-26,29;UBERON:0001893,5.19e-26,29;UBERON:0002780,6.85e-26,39;UBERON:0001890,6.85e-26,39;UBERON:0006240,6.85e-26,39;UBERON:0002020,2.93e-24,34;UBERON:0004121,2.03e-23,95;UBERON:0000924,2.03e-23,95;UBERON:0006601,2.03e-23,95;UBERON:0003056,5.48e-22,49;UBERON:0002346,3.84e-21,64;UBERON:0003075,3.84e-21,64;UBERON:0007284,3.84e-21,64;UBERON:0002619,1.26e-19,17;UBERON:0000956,1.19e-18,21;UBERON:0001869,1.19e-18,21;UBERON:0000203,1.19e-18,21;UBERON:0010371,6.55e-18,73;UBERON:0010314,3.69e-13,92;UBERON:0000025,1.23e-09,114;UBERON:0004111,1.14e-08,122;UBERON:0004684,1.30e-08,3;UBERON:0002275,1.30e-08,3;UBERON:0011216,1.79e-08,194;UBERON:0002420,2.07e-08,8;UBERON:0007245,2.07e-08,8;UBERON:0010009,2.07e-08,8;UBERON:0010011,2.07e-08,8;UBERON:0000454,2.07e-08,8;UBERON:0002950,9.64e-07,4;UBERON:0001891,9.64e-07,4;UBERON:0009616,9.64e-07,4;UBERON:0010286,9.64e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,2.53532561402472,0,0.889294796111139,0,0,0,0,0,0,0.405017814995072,0,0.856952953211411,0.662605622854841,0,0,0,2.20231761998777,1.40456071893706,1.53606533256243,0.791317726381163,1.09785172322892,1.56274011167028,0.558365998002762,2.25105044012672,1.22238598221448,1.17851434189467,0.427115042397309,0.372798891650601,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0,0,0.289198713839823,0,0.161766849947409,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,2.54644086988199,7.77751024791665,0.251308704225729,7.99591872884472,7.92717917724025,2.49345653471472,2.27137768294861,0,0,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,1.47202963994889,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0.333690211432188,0.393117990226406,0.449724224769707,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,1.9266070798535,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,1.16422815404479,0.428674070063185,0.532020700926821,0,0.329098041204242,0,0,0,0,0,0,0,0,0.164140899745061,0,1.11255181206306,0,0.206386867963223,0,0.188368457004691,0.410082683163076,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,3.95326289831947,5.06357760157895,5.15605962095457,3.95262319390481,7.53590771747707,6.7985450765073,6.07520250208625,5.85417564191487,8.15656336171568,4.14208249401456,0,0,0.170733605754134,0,0.209613162627982,0.919217542250071,0,0,0.320919209591815,0,0,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0,0.38581844092741,0,0,0.685738504770831,0,0,0,0.282328141245992,0,0,0.263069711437843,0.271608227691724,0,0,0,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p13@Epb4.9 | |||
}} |
Revision as of 18:37, 4 August 2015
Short description: | p13@Epb4.9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Epb4.9_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 207bp_to_uc007uop.1_5end |
EntrezGene: | 13829 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.96e-12 | 23 |
neuroblast (sensu Vertebrata) | 6.96e-12 | 23 |
granule cell | 1.30e-08 | 3 |
raphe nuclei neuron | 1.30e-08 | 3 |
neuron | 1.12e-07 | 33 |
neuronal stem cell | 1.12e-07 | 33 |
neuroblast | 1.12e-07 | 33 |
electrically signaling cell | 1.12e-07 | 33 |