FFCP PHASE1:Mm9::chr1:155500236..155500306,+: Difference between revisions
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{{FFCP|EntrezGene=67792|HGNC=|MCL_coexpression_id=30|UniProt=Q8BXT1|association_with_transcript=69bp_to_NM_026380,uc007dad.1_5end|description=CAGE_peak_1_at_Rgs8_5end|id=chr1:155500236..155500306,+|ontology_enrichment_celltype=CL:0002319!5.56e-16!43;CL:0000221!3.96e-15!44;CL:0000133!3.96e-15!44;CL:0000117!2.83e-14!23;CL:0000337!2.83e-14!23;CL:0000540!4.80e-13!33;CL:0000047!4.80e-13!33;CL:0000031!4.80e-13!33;CL:0000404!4.80e-13!33;CL:0000055!1.63e-11!50;CL:0000393!2.93e-09!39;CL:0000211!2.93e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,7.34e-18,23;CL:0000337,7.34e-18,23;CL:0002319,4.43e-15,43;CL:0000221,1.94e-14,44;CL:0000133,1.94e-14,44;CL:0000540,5.22e-12,33;CL:0000047,5.22e-12,33;CL:0000031,5.22e-12,33;CL:0000404,5.22e-12,33;CL:0000393,1.07e-08,39;CL:0000211,1.07e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.41e-34!75;UBERON:0001016!9.41e-34!75;UBERON:0001017!2.56e-33!73;UBERON:0005743!2.56e-33!73;UBERON:0004121!1.33e-29!102;UBERON:0000924!1.33e-29!102;UBERON:0006601!1.33e-29!102;UBERON:0000033!7.88e-29!63;UBERON:0002346!1.98e-28!71;UBERON:0003075!1.98e-28!71;UBERON:0007284!1.98e-28!71;UBERON:0001049!3.27e-27!52;UBERON:0005068!3.27e-27!52;UBERON:0006241!3.27e-27!52;UBERON:0007135!3.27e-27!52;UBERON:0000955!8.19e-27!50;UBERON:0006238!8.19e-27!50;UBERON:0002616!2.66e-26!49;UBERON:0003056!3.71e-25!49;UBERON:0003080!1.98e-20!40;UBERON:0002020!3.81e-20!34;UBERON:0002780!1.01e-19!39;UBERON:0001890!1.01e-19!39;UBERON:0006240!1.01e-19!39;UBERON:0002791!1.80e-17!29;UBERON:0003528!1.80e-17!29;UBERON:0001893!1.80e-17!29;UBERON:0000153!1.77e-15!94;UBERON:0007811!1.29e-14!86;UBERON:0000956!1.88e-12!21;UBERON:0001869!1.88e-12!21;UBERON:0000203!1.88e-12!21;UBERON:0002619!1.98e-10!17;UBERON:0002021!9.32e-08!10;UBERON:0000411!9.32e-08!10;UBERON:0001950!9.32e-08!10;UBERON:0003076!2.92e-07!12;UBERON:0003057!2.92e-07!12;UBERON:0000025!9.84e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.18e-39,64;UBERON:0003075,2.18e-39,64;UBERON:0007284,2.18e-39,64;UBERON:0000073,2.65e-36,54;UBERON:0001017,2.66e-36,73;UBERON:0001016,4.57e-36,75;UBERON:0004121,1.44e-34,95;UBERON:0000924,1.44e-34,95;UBERON:0006601,1.44e-34,95;UBERON:0001049,1.10e-33,52;UBERON:0005068,1.10e-33,52;UBERON:0006241,1.10e-33,52;UBERON:0007135,1.10e-33,52;UBERON:0010371,1.38e-32,73;UBERON:0003056,4.65e-31,49;UBERON:0000955,4.87e-30,47;UBERON:0006238,4.87e-30,47;UBERON:0002616,2.14e-29,46;UBERON:0002020,2.13e-25,34;UBERON:0003080,5.30e-25,40;UBERON:0002780,4.20e-24,39;UBERON:0001890,4.20e-24,39;UBERON:0006240,4.20e-24,39;UBERON:0003528,5.79e-22,29;UBERON:0002791,5.79e-22,29;UBERON:0001893,5.79e-22,29;UBERON:0010314,8.23e-21,92;UBERON:0000956,1.60e-15,21;UBERON:0001869,1.60e-15,21;UBERON:0000203,1.60e-15,21;UBERON:0002619,6.26e-13,17;UBERON:0002021,1.65e-09,10;UBERON:0000411,1.65e-09,10;UBERON:0001950,1.65e-09,10;UBERON:0003076,7.12e-09,12;UBERON:0003057,7.12e-09,12;UBERON:0002420,1.36e-07,8;UBERON:0007245,1.36e-07,8;UBERON:0010009,1.36e-07,8;UBERON:0010011,1.36e-07,8;UBERON:0000454,1.36e-07,8;UBERON:0000025,2.37e-07,114|phase1_expression=3.04282809499109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,16.0731818385522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,39.0265029920999,8.5677611266444,1.94429899074283,4.4795654920116,34.5006154475932,0,0,0,0,0.573066879877513,0,34.7984312678508,48.667170093027,36.7622214033584,3.04960078862219,1.77858959222228,0,0,0,5.69240209984969,1.15265491596466,7.77672092313582,14.9856591548177,13.0401476037857,9.42648248532552,12.3686382932904,11.1466627285608,6.99671938433125,8.27296907949019,79.2834343195599,66.7804778185532,57.1416303713226,56.0516722853324,53.9777097254217,39.068502791757,49.136207824243,20.8222165711722,25.3645091309505,18.2669722993674,15.0913981647049,15.2847545576746,0.530083353332288,6.42358260907677,0.289864488701678,0,2.03991400112325,0,0,0,4.0728881838208,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0.258937883647172,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.352766121407114,0,0,0,0,0.485300549842228,0,0,1.86391761218122,409.893115816166,379.726879452794,0,0.11981512450592,0,0,43.8886573456131,36.6000482254901,11.5602003943835,40.848715245185,39.6358958862012,62.5442014124276,40.3980745038717,0.407357455401265,0,0,11.5743020737561,8.45782879257574,9.19608417733892,8.10279584124071,8.28876498096433,9.79725587779121,11.1458936647819,14.8985742049969,42.9447595426766,0.215567992932842,3.02569728268511,1.05570674498369,1.7535658594206,1.11218899690239,0.696504333044333,1.23469281844766,0,0,0,0,0.414251545071004,0.469052119962192,0,0.946978942340841,0.787056926989615,0,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,47.1049484783645,10.8049842998249,0,0,1.06644125267617,0.928946687441754,0.38660238396628,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,1.51593129416388,0.488894929326078,0.169745085775188,0,0.167506257441816,0.714130922658041,0.195133647857799,1.41871629695572,2.43611158613652,2.07291199254733,0,0,0,0,0,0,0,12.2018448390722,13.7137673312878,0,0,1.89304931649754,1.17131623288992,0.861693590931196,0.716906393857656,0.668396022247182,0,0.809621403349789,0.876767573733936,0.790575555893047,9.3183181762324,0,0.35613120733451,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0,0.727067458955011,0,0,0,0,6.46835250932197,4.14140516272013,3.10460841078611,1.28602221018955,0.354680467284547,1.96205699362278,1.64549020602121,1.8267896946876,0.704015124191131,0,0.220528398054962,0.32977250588296,0.161464426695906,0.180938774784468,0.238744688006273,0.164140899745061,0,7.04616147639937,0,0.412773735926445,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.790839983952838,0.813277868507395,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0.240390899039938,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0.167884616364078,0.19318959403219,0.375364950902364,0,0,0,37.2736216127264,38.6673198666029,30.363462212288,38.1514064802986,41.1049511862385,42.3020582538232,50.6266875173854,44.1314779159736,49.3925225792783,47.6339486811674,5.70830411712972,9.17757208822371,6.31714341290296,3.8897074730927,6.07878171621149,2.94149613520023,3.55594764482584,3.29656091582231,2.24643446714271,4.54854981174835,3.54871019846336,2.64076877940507,3.55837728385553,2.94515701062399,3.56099907524802,2.85776214769844,2.31768651889711,3.6652751888104,3.70877310722976,4.12156976376312,3.42869252385415,1.95223386775271,3.57654284920981,2.0348498328526,3.85848459702856,2.96151127620868,4.20734337607377,3.15683653725411,3.12349461845482,1.68342681497322,3.32178050747688,3.34915240076916,2.04615521584845,4.49316839439301,3.2794123866794,7.49431733813838,1.63752125911786,2.36358159453128,1.91288332068843,1.54413993383661,0.695603506861264|short_description=p1@Rgs8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67792 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BXT1 | |||
|association_with_transcript=69bp_to_NM_026380,uc007dad.1_5end | |||
|cluster_id=chr1:155500236..155500306,+ | |||
|description=CAGE_peak_1_at_Rgs8_5end | |||
|id=chr1:155500236..155500306,+ | |||
|ontology_enrichment_celltype=CL:0002319!5.56e-16!43;CL:0000221!3.96e-15!44;CL:0000133!3.96e-15!44;CL:0000117!2.83e-14!23;CL:0000337!2.83e-14!23;CL:0000540!4.80e-13!33;CL:0000047!4.80e-13!33;CL:0000031!4.80e-13!33;CL:0000404!4.80e-13!33;CL:0000055!1.63e-11!50;CL:0000393!2.93e-09!39;CL:0000211!2.93e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.34e-18,23;CL:0000337,7.34e-18,23;CL:0002319,4.43e-15,43;CL:0000221,1.94e-14,44;CL:0000133,1.94e-14,44;CL:0000540,5.22e-12,33;CL:0000047,5.22e-12,33;CL:0000031,5.22e-12,33;CL:0000404,5.22e-12,33;CL:0000393,1.07e-08,39;CL:0000211,1.07e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.41e-34!75;UBERON:0001016!9.41e-34!75;UBERON:0001017!2.56e-33!73;UBERON:0005743!2.56e-33!73;UBERON:0004121!1.33e-29!102;UBERON:0000924!1.33e-29!102;UBERON:0006601!1.33e-29!102;UBERON:0000033!7.88e-29!63;UBERON:0002346!1.98e-28!71;UBERON:0003075!1.98e-28!71;UBERON:0007284!1.98e-28!71;UBERON:0001049!3.27e-27!52;UBERON:0005068!3.27e-27!52;UBERON:0006241!3.27e-27!52;UBERON:0007135!3.27e-27!52;UBERON:0000955!8.19e-27!50;UBERON:0006238!8.19e-27!50;UBERON:0002616!2.66e-26!49;UBERON:0003056!3.71e-25!49;UBERON:0003080!1.98e-20!40;UBERON:0002020!3.81e-20!34;UBERON:0002780!1.01e-19!39;UBERON:0001890!1.01e-19!39;UBERON:0006240!1.01e-19!39;UBERON:0002791!1.80e-17!29;UBERON:0003528!1.80e-17!29;UBERON:0001893!1.80e-17!29;UBERON:0000153!1.77e-15!94;UBERON:0007811!1.29e-14!86;UBERON:0000956!1.88e-12!21;UBERON:0001869!1.88e-12!21;UBERON:0000203!1.88e-12!21;UBERON:0002619!1.98e-10!17;UBERON:0002021!9.32e-08!10;UBERON:0000411!9.32e-08!10;UBERON:0001950!9.32e-08!10;UBERON:0003076!2.92e-07!12;UBERON:0003057!2.92e-07!12;UBERON:0000025!9.84e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.18e-39,64;UBERON:0003075,2.18e-39,64;UBERON:0007284,2.18e-39,64;UBERON:0000073,2.65e-36,54;UBERON:0001017,2.66e-36,73;UBERON:0001016,4.57e-36,75;UBERON:0004121,1.44e-34,95;UBERON:0000924,1.44e-34,95;UBERON:0006601,1.44e-34,95;UBERON:0001049,1.10e-33,52;UBERON:0005068,1.10e-33,52;UBERON:0006241,1.10e-33,52;UBERON:0007135,1.10e-33,52;UBERON:0010371,1.38e-32,73;UBERON:0003056,4.65e-31,49;UBERON:0000955,4.87e-30,47;UBERON:0006238,4.87e-30,47;UBERON:0002616,2.14e-29,46;UBERON:0002020,2.13e-25,34;UBERON:0003080,5.30e-25,40;UBERON:0002780,4.20e-24,39;UBERON:0001890,4.20e-24,39;UBERON:0006240,4.20e-24,39;UBERON:0003528,5.79e-22,29;UBERON:0002791,5.79e-22,29;UBERON:0001893,5.79e-22,29;UBERON:0010314,8.23e-21,92;UBERON:0000956,1.60e-15,21;UBERON:0001869,1.60e-15,21;UBERON:0000203,1.60e-15,21;UBERON:0002619,6.26e-13,17;UBERON:0002021,1.65e-09,10;UBERON:0000411,1.65e-09,10;UBERON:0001950,1.65e-09,10;UBERON:0003076,7.12e-09,12;UBERON:0003057,7.12e-09,12;UBERON:0002420,1.36e-07,8;UBERON:0007245,1.36e-07,8;UBERON:0010009,1.36e-07,8;UBERON:0010011,1.36e-07,8;UBERON:0000454,1.36e-07,8;UBERON:0000025,2.37e-07,114 | |||
|phase1_expression=3.04282809499109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,16.0731818385522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,39.0265029920999,8.5677611266444,1.94429899074283,4.4795654920116,34.5006154475932,0,0,0,0,0.573066879877513,0,34.7984312678508,48.667170093027,36.7622214033584,3.04960078862219,1.77858959222228,0,0,0,5.69240209984969,1.15265491596466,7.77672092313582,14.9856591548177,13.0401476037857,9.42648248532552,12.3686382932904,11.1466627285608,6.99671938433125,8.27296907949019,79.2834343195599,66.7804778185532,57.1416303713226,56.0516722853324,53.9777097254217,39.068502791757,49.136207824243,20.8222165711722,25.3645091309505,18.2669722993674,15.0913981647049,15.2847545576746,0.530083353332288,6.42358260907677,0.289864488701678,0,2.03991400112325,0,0,0,4.0728881838208,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0.258937883647172,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.352766121407114,0,0,0,0,0.485300549842228,0,0,1.86391761218122,409.893115816166,379.726879452794,0,0.11981512450592,0,0,43.8886573456131,36.6000482254901,11.5602003943835,40.848715245185,39.6358958862012,62.5442014124276,40.3980745038717,0.407357455401265,0,0,11.5743020737561,8.45782879257574,9.19608417733892,8.10279584124071,8.28876498096433,9.79725587779121,11.1458936647819,14.8985742049969,42.9447595426766,0.215567992932842,3.02569728268511,1.05570674498369,1.7535658594206,1.11218899690239,0.696504333044333,1.23469281844766,0,0,0,0,0.414251545071004,0.469052119962192,0,0.946978942340841,0.787056926989615,0,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,47.1049484783645,10.8049842998249,0,0,1.06644125267617,0.928946687441754,0.38660238396628,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,1.51593129416388,0.488894929326078,0.169745085775188,0,0.167506257441816,0.714130922658041,0.195133647857799,1.41871629695572,2.43611158613652,2.07291199254733,0,0,0,0,0,0,0,12.2018448390722,13.7137673312878,0,0,1.89304931649754,1.17131623288992,0.861693590931196,0.716906393857656,0.668396022247182,0,0.809621403349789,0.876767573733936,0.790575555893047,9.3183181762324,0,0.35613120733451,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0,0.727067458955011,0,0,0,0,6.46835250932197,4.14140516272013,3.10460841078611,1.28602221018955,0.354680467284547,1.96205699362278,1.64549020602121,1.8267896946876,0.704015124191131,0,0.220528398054962,0.32977250588296,0.161464426695906,0.180938774784468,0.238744688006273,0.164140899745061,0,7.04616147639937,0,0.412773735926445,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.790839983952838,0.813277868507395,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0.240390899039938,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0.167884616364078,0.19318959403219,0.375364950902364,0,0,0,37.2736216127264,38.6673198666029,30.363462212288,38.1514064802986,41.1049511862385,42.3020582538232,50.6266875173854,44.1314779159736,49.3925225792783,47.6339486811674,5.70830411712972,9.17757208822371,6.31714341290296,3.8897074730927,6.07878171621149,2.94149613520023,3.55594764482584,3.29656091582231,2.24643446714271,4.54854981174835,3.54871019846336,2.64076877940507,3.55837728385553,2.94515701062399,3.56099907524802,2.85776214769844,2.31768651889711,3.6652751888104,3.70877310722976,4.12156976376312,3.42869252385415,1.95223386775271,3.57654284920981,2.0348498328526,3.85848459702856,2.96151127620868,4.20734337607377,3.15683653725411,3.12349461845482,1.68342681497322,3.32178050747688,3.34915240076916,2.04615521584845,4.49316839439301,3.2794123866794,7.49431733813838,1.63752125911786,2.36358159453128,1.91288332068843,1.54413993383661,0.695603506861264 | |||
|short_description=p1@Rgs8 | |||
}} |
Revision as of 00:45, 5 August 2015
Short description: | p1@Rgs8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rgs8_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 69bp_to_NM_026380, uc007dad.1_5end |
EntrezGene: | 67792 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.34e-18 | 23 |
neuroblast (sensu Vertebrata) | 7.34e-18 | 23 |
neural cell | 4.43e-15 | 43 |
ectodermal cell | 1.94e-14 | 44 |
neurectodermal cell | 1.94e-14 | 44 |
neuron | 5.22e-12 | 33 |
neuronal stem cell | 5.22e-12 | 33 |
neuroblast | 5.22e-12 | 33 |
electrically signaling cell | 5.22e-12 | 33 |
electrically responsive cell | 1.07e-08 | 39 |
electrically active cell | 1.07e-08 | 39 |