FFCP PHASE1:Mm9::chr1:94998387..94998398,-: Difference between revisions
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{{FFCP|EntrezGene=16560|HGNC=|MCL_coexpression_id=1|UniProt=E9Q9G6|association_with_transcript=9bp_to_ENSMUST00000112958_5end|description=CAGE_peak_3_at_Kif1a_5end|id=chr1:94998387..94998398,-|ontology_enrichment_celltype=CL:0000221!1.51e-20!44;CL:0000133!1.51e-20!44;CL:0002319!2.13e-20!43;CL:0000540!7.97e-17!33;CL:0000047!7.97e-17!33;CL:0000031!7.97e-17!33;CL:0000404!7.97e-17!33;CL:0000055!2.05e-16!50;CL:0000117!9.30e-14!23;CL:0000337!9.30e-14!23;CL:0000393!1.36e-13!39;CL:0000211!1.36e-13!39;CL:0002321!4.26e-07!70;CL:0000220!4.26e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,3.55e-25,44;CL:0000133,3.55e-25,44;CL:0002319,5.47e-25,43;CL:0000540,1.53e-20,33;CL:0000047,1.53e-20,33;CL:0000031,1.53e-20,33;CL:0000404,1.53e-20,33;CL:0000393,5.42e-17,39;CL:0000211,5.42e-17,39;CL:0000117,1.01e-16,23;CL:0000337,1.01e-16,23;CL:0002321,8.92e-11,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.79e-40!75;UBERON:0001016!2.79e-40!75;UBERON:0001017!2.34e-39!73;UBERON:0005743!2.34e-39!73;UBERON:0004121!6.36e-38!102;UBERON:0000924!6.36e-38!102;UBERON:0006601!6.36e-38!102;UBERON:0002346!1.44e-33!71;UBERON:0003075!1.44e-33!71;UBERON:0007284!1.44e-33!71;UBERON:0000033!9.68e-30!63;UBERON:0001049!1.05e-28!52;UBERON:0005068!1.05e-28!52;UBERON:0006241!1.05e-28!52;UBERON:0007135!1.05e-28!52;UBERON:0000955!1.26e-27!50;UBERON:0006238!1.26e-27!50;UBERON:0002616!6.21e-27!49;UBERON:0003056!2.58e-24!49;UBERON:0003080!2.83e-21!40;UBERON:0002020!4.12e-21!34;UBERON:0002780!1.52e-20!39;UBERON:0001890!1.52e-20!39;UBERON:0006240!1.52e-20!39;UBERON:0002791!5.01e-18!29;UBERON:0003528!5.01e-18!29;UBERON:0001893!5.01e-18!29;UBERON:0007811!4.69e-14!86;UBERON:0000956!4.76e-13!21;UBERON:0001869!4.76e-13!21;UBERON:0000203!4.76e-13!21;UBERON:0000153!1.91e-12!94;UBERON:0002619!3.97e-11!17;UBERON:0003076!7.64e-08!12;UBERON:0003057!7.64e-08!12;UBERON:0002021!1.11e-07!10;UBERON:0000411!1.11e-07!10;UBERON:0001950!1.11e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.03e-50,75;UBERON:0001017,1.28e-48,73;UBERON:0004121,1.29e-45,95;UBERON:0000924,1.29e-45,95;UBERON:0006601,1.29e-45,95;UBERON:0002346,4.06e-41,64;UBERON:0003075,4.06e-41,64;UBERON:0007284,4.06e-41,64;UBERON:0000073,2.46e-37,54;UBERON:0001049,2.42e-35,52;UBERON:0005068,2.42e-35,52;UBERON:0006241,2.42e-35,52;UBERON:0007135,2.42e-35,52;UBERON:0010371,7.09e-35,73;UBERON:0000955,4.35e-31,47;UBERON:0006238,4.35e-31,47;UBERON:0002616,3.05e-30,46;UBERON:0003056,7.22e-30,49;UBERON:0010314,1.15e-27,92;UBERON:0003080,4.41e-26,40;UBERON:0002020,7.06e-26,34;UBERON:0002780,3.58e-25,39;UBERON:0001890,3.58e-25,39;UBERON:0006240,3.58e-25,39;UBERON:0003528,4.90e-22,29;UBERON:0002791,4.90e-22,29;UBERON:0001893,4.90e-22,29;UBERON:0000956,7.67e-16,21;UBERON:0001869,7.67e-16,21;UBERON:0000203,7.67e-16,21;UBERON:0002619,1.88e-13,17;UBERON:0003076,2.25e-09,12;UBERON:0003057,2.25e-09,12;UBERON:0002021,3.58e-09,10;UBERON:0000411,3.58e-09,10;UBERON:0001950,3.58e-09,10;UBERON:0002420,2.47e-07,8;UBERON:0007245,2.47e-07,8;UBERON:0010009,2.47e-07,8;UBERON:0010011,2.47e-07,8;UBERON:0000454,2.47e-07,8|phase1_expression=1.92178616525753,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84746753861098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,1.56478268869608,9.59310688073965,9.88587822305123,11.8602238435313,4.89952475688769,4.31257693094915,0,0,0,1.02903774414379,2.0057340795713,0,12.7459370341547,13.7537654610729,14.5781222806421,1.35537812827653,0.889294796111139,0.899899717281399,0,0.7104801149461,4.79360176829448,3.84218305321555,6.63613518774257,9.18040380655497,5.67877395648731,21.1381728458815,26.0624878322904,9.0643191419066,9.4887016308054,10.1114066527102,25.3266526298594,42.3921962442823,36.5583549149859,18.9916254331479,17.7486028588675,13.022834263919,30.9893128891533,21.3849791812038,25.0589126353969,19.4454866412621,21.4981238006645,14.5391567743734,3.93776205332557,7.17929821014462,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,2.67602497575693,0,0,0,0,0,0,0.91347103775248,0,1.48442139064825,0.346970653532272,3.04465478312141,1.38369298353635,1.80867168663147,1.64624189989987,0.879666139307728,0,0.289198713839823,0,0.161766849947409,0,0,0,20.7874365878198,14.2423760633149,0,0,0,0,34.1522657842996,38.4300506367646,27.0156857042658,39.631945003839,29.1515621356577,43.6354893575076,36.3420429271777,0.305518091550949,0,0,3.36706969418358,2.86264974517948,1.60931473103431,4.50155324513373,4.06903008156431,7.0757959117381,8.96796041993949,6.74652416830048,16.039608985819,0.215567992932842,0.567318240503458,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0.710234206755631,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0.329119699826961,0,0.162137619091711,0,0,0.134206418760372,30.2817525932343,19.7576855768226,0,0,0.213288250535234,0.464473343720877,0.38660238396628,1.4117846723634,0.22237804384487,0.190225626112559,0,0.164698954724011,1.0053408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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16560 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q9G6 | |||
|association_with_transcript=9bp_to_ENSMUST00000112958_5end | |||
|cluster_id=chr1:94998387..94998398,- | |||
|description=CAGE_peak_3_at_Kif1a_5end | |||
|id=chr1:94998387..94998398,- | |||
|ontology_enrichment_celltype=CL:0000221!1.51e-20!44;CL:0000133!1.51e-20!44;CL:0002319!2.13e-20!43;CL:0000540!7.97e-17!33;CL:0000047!7.97e-17!33;CL:0000031!7.97e-17!33;CL:0000404!7.97e-17!33;CL:0000055!2.05e-16!50;CL:0000117!9.30e-14!23;CL:0000337!9.30e-14!23;CL:0000393!1.36e-13!39;CL:0000211!1.36e-13!39;CL:0002321!4.26e-07!70;CL:0000220!4.26e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.55e-25,44;CL:0000133,3.55e-25,44;CL:0002319,5.47e-25,43;CL:0000540,1.53e-20,33;CL:0000047,1.53e-20,33;CL:0000031,1.53e-20,33;CL:0000404,1.53e-20,33;CL:0000393,5.42e-17,39;CL:0000211,5.42e-17,39;CL:0000117,1.01e-16,23;CL:0000337,1.01e-16,23;CL:0002321,8.92e-11,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.79e-40!75;UBERON:0001016!2.79e-40!75;UBERON:0001017!2.34e-39!73;UBERON:0005743!2.34e-39!73;UBERON:0004121!6.36e-38!102;UBERON:0000924!6.36e-38!102;UBERON:0006601!6.36e-38!102;UBERON:0002346!1.44e-33!71;UBERON:0003075!1.44e-33!71;UBERON:0007284!1.44e-33!71;UBERON:0000033!9.68e-30!63;UBERON:0001049!1.05e-28!52;UBERON:0005068!1.05e-28!52;UBERON:0006241!1.05e-28!52;UBERON:0007135!1.05e-28!52;UBERON:0000955!1.26e-27!50;UBERON:0006238!1.26e-27!50;UBERON:0002616!6.21e-27!49;UBERON:0003056!2.58e-24!49;UBERON:0003080!2.83e-21!40;UBERON:0002020!4.12e-21!34;UBERON:0002780!1.52e-20!39;UBERON:0001890!1.52e-20!39;UBERON:0006240!1.52e-20!39;UBERON:0002791!5.01e-18!29;UBERON:0003528!5.01e-18!29;UBERON:0001893!5.01e-18!29;UBERON:0007811!4.69e-14!86;UBERON:0000956!4.76e-13!21;UBERON:0001869!4.76e-13!21;UBERON:0000203!4.76e-13!21;UBERON:0000153!1.91e-12!94;UBERON:0002619!3.97e-11!17;UBERON:0003076!7.64e-08!12;UBERON:0003057!7.64e-08!12;UBERON:0002021!1.11e-07!10;UBERON:0000411!1.11e-07!10;UBERON:0001950!1.11e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.03e-50,75;UBERON:0001017,1.28e-48,73;UBERON:0004121,1.29e-45,95;UBERON:0000924,1.29e-45,95;UBERON:0006601,1.29e-45,95;UBERON:0002346,4.06e-41,64;UBERON:0003075,4.06e-41,64;UBERON:0007284,4.06e-41,64;UBERON:0000073,2.46e-37,54;UBERON:0001049,2.42e-35,52;UBERON:0005068,2.42e-35,52;UBERON:0006241,2.42e-35,52;UBERON:0007135,2.42e-35,52;UBERON:0010371,7.09e-35,73;UBERON:0000955,4.35e-31,47;UBERON:0006238,4.35e-31,47;UBERON:0002616,3.05e-30,46;UBERON:0003056,7.22e-30,49;UBERON:0010314,1.15e-27,92;UBERON:0003080,4.41e-26,40;UBERON:0002020,7.06e-26,34;UBERON:0002780,3.58e-25,39;UBERON:0001890,3.58e-25,39;UBERON:0006240,3.58e-25,39;UBERON:0003528,4.90e-22,29;UBERON:0002791,4.90e-22,29;UBERON:0001893,4.90e-22,29;UBERON:0000956,7.67e-16,21;UBERON:0001869,7.67e-16,21;UBERON:0000203,7.67e-16,21;UBERON:0002619,1.88e-13,17;UBERON:0003076,2.25e-09,12;UBERON:0003057,2.25e-09,12;UBERON:0002021,3.58e-09,10;UBERON:0000411,3.58e-09,10;UBERON:0001950,3.58e-09,10;UBERON:0002420,2.47e-07,8;UBERON:0007245,2.47e-07,8;UBERON:0010009,2.47e-07,8;UBERON:0010011,2.47e-07,8;UBERON:0000454,2.47e-07,8 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84746753861098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,1.56478268869608,9.59310688073965,9.88587822305123,11.8602238435313,4.89952475688769,4.31257693094915,0,0,0,1.02903774414379,2.0057340795713,0,12.7459370341547,13.7537654610729,14.5781222806421,1.35537812827653,0.889294796111139,0.899899717281399,0,0.7104801149461,4.79360176829448,3.84218305321555,6.63613518774257,9.18040380655497,5.67877395648731,21.1381728458815,26.0624878322904,9.0643191419066,9.4887016308054,10.1114066527102,25.3266526298594,42.3921962442823,36.5583549149859,18.9916254331479,17.7486028588675,13.022834263919,30.9893128891533,21.3849791812038,25.0589126353969,19.4454866412621,21.4981238006645,14.5391567743734,3.93776205332557,7.17929821014462,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,2.67602497575693,0,0,0,0,0,0,0.91347103775248,0,1.48442139064825,0.346970653532272,3.04465478312141,1.38369298353635,1.80867168663147,1.64624189989987,0.879666139307728,0,0.289198713839823,0,0.161766849947409,0,0,0,20.7874365878198,14.2423760633149,0,0,0,0,34.1522657842996,38.4300506367646,27.0156857042658,39.631945003839,29.1515621356577,43.6354893575076,36.3420429271777,0.305518091550949,0,0,3.36706969418358,2.86264974517948,1.60931473103431,4.50155324513373,4.06903008156431,7.0757959117381,8.96796041993949,6.74652416830048,16.039608985819,0.215567992932842,0.567318240503458,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0.710234206755631,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0.329119699826961,0,0.162137619091711,0,0,0.134206418760372,30.2817525932343,19.7576855768226,0,0,0.213288250535234,0.464473343720877,0.38660238396628,1.4117846723634,0.22237804384487,0.190225626112559,0,0.164698954724011,1.00534083520108,0.198956472041151,0.58489226135736,0,0,0.398282546508734,0,0.228497025219458,0,0.610953983535943,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0.339490171550376,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,43.0275581167282,43.7199590988918,0,0,4.10160685241134,6.63745865304285,5.17016154558717,5.01834475700359,2.67358408898873,3.96307143104365,5.26253912177363,8.76767573733936,9.88219444866309,21.5285282002611,0.283880170416537,0.178065603667255,0.488660878060728,0.329940245945071,0,0.242780636154981,0.604647113929502,0,0,0.614870295887855,0.258428293168221,0,0,0.632073515871632,0,0,4.08527526904546,1.62054984628179,1.68166288917581,2.7863814554107,1.77340233642274,1.60531935841864,4.11372551505302,5.17590413494819,0,0.21183207086382,1.98475558249466,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,35.6016579860179,0.170870880797853,0.412773735926445,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.756037385752609,0.209088296014469,0.218362563746178,0.134864346384821,0.578574190077352,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.777804753376191,0.904118764344118,0.675824501963113,0,0.13020438484395,0,0,0,0,0,0.308132871494482,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0.335769232728157,1.35232715822533,0,0,0,0.501572104035363,38.9678771405776,39.5879703396172,25.7802981047728,36.4328746568618,25.3480532315138,21.9064230243013,24.9758325085768,21.1650965515384,19.0319811773366,18.1216109113137,1.14166082342594,3.19219898720825,2.39027048055788,2.18796045361465,1.04806581313991,3.12533964365024,3.77819437262746,3.29656091582231,3.85103051510178,2.52697211763797,3.8021894983536,5.09291121742406,2.24739617927718,3.71345883948242,4.25022470271538,7.1444053692461,4.51948871184936,2.50781986602817,2.06042950401653,3.97437084362873,3.08582327146874,4.2594193478241,3.33810665926249,4.65108533223451,5.17601592284318,4.39995961036718,3.47563148458268,3.15683653725411,3.80251518768413,2.80571135828869,4.03359061622192,3.84167481264697,5.32000356120596,1.70430525304563,3.66522560864169,8.99318080576605,1.87145286756327,4.29742108096597,2.10417165275728,1.54413993383661,1.85494268496337 | |||
|short_description=p3@Kif1a | |||
}} |
Revision as of 05:40, 6 August 2015
Short description: | p3@Kif1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kif1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 9bp_to_ENSMUST00000112958_5end |
EntrezGene: | 16560 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.55e-25 | 44 |
neurectodermal cell | 3.55e-25 | 44 |
neural cell | 5.47e-25 | 43 |
neuron | 1.53e-20 | 33 |
neuronal stem cell | 1.53e-20 | 33 |
neuroblast | 1.53e-20 | 33 |
electrically signaling cell | 1.53e-20 | 33 |
electrically responsive cell | 5.42e-17 | 39 |
electrically active cell | 5.42e-17 | 39 |
CNS neuron (sensu Vertebrata) | 1.01e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.01e-16 | 23 |
embryonic cell | 8.92e-11 | 70 |