FFCP PHASE1:Mm9::chr4:42929519..42929584,+: Difference between revisions
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{{FFCP|EntrezGene=230085|HGNC=|MCL_coexpression_id=2|UniProt=Q80TL4|association_with_transcript=0bp_to_ENSMUST00000107975,ENSMUST00000132173,ENSMUST00000151824_5end|description=CAGE_peak_2_at_N28178_5end|id=chr4:42929519..42929584,+|ontology_enrichment_celltype=CL:0000117!1.44e-12!23;CL:0000337!1.44e-12!23;CL:0000540!2.21e-07!33;CL:0000047!2.21e-07!33;CL:0000031!2.21e-07!33;CL:0000404!2.21e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.12e-17,23;CL:0000337,4.12e-17,23;CL:0000540,6.51e-11,33;CL:0000047,6.51e-11,33;CL:0000031,6.51e-11,33;CL:0000404,6.51e-11,33;CL:0000393,9.78e-09,39;CL:0000211,9.78e-09,39;CL:0002610,1.23e-07,3;CL:0002319,1.25e-07,43;CL:0000221,2.19e-07,44;CL:0000133,2.19e-07,44;CL:0002614,9.52e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.17e-22!52;UBERON:0005068!4.17e-22!52;UBERON:0006241!4.17e-22!52;UBERON:0007135!4.17e-22!52;UBERON:0002020!3.17e-21!34;UBERON:0000955!1.01e-20!50;UBERON:0006238!1.01e-20!50;UBERON:0002616!6.19e-20!49;UBERON:0001017!1.74e-18!73;UBERON:0005743!1.74e-18!73;UBERON:0000073!1.89e-18!75;UBERON:0001016!1.89e-18!75;UBERON:0000033!1.54e-17!63;UBERON:0002791!2.65e-17!29;UBERON:0003528!2.65e-17!29;UBERON:0001893!2.65e-17!29;UBERON:0002346!2.80e-17!71;UBERON:0003075!2.80e-17!71;UBERON:0007284!2.80e-17!71;UBERON:0003080!1.37e-15!40;UBERON:0004121!2.24e-15!102;UBERON:0000924!2.24e-15!102;UBERON:0006601!2.24e-15!102;UBERON:0002780!7.69e-15!39;UBERON:0001890!7.69e-15!39;UBERON:0006240!7.69e-15!39;UBERON:0003056!8.35e-15!49;UBERON:0000956!1.83e-11!21;UBERON:0001869!1.83e-11!21;UBERON:0000203!1.83e-11!21;UBERON:0002021!3.50e-11!10;UBERON:0000411!3.50e-11!10;UBERON:0001950!3.50e-11!10;UBERON:0002619!4.04e-11!17;UBERON:0007811!3.35e-09!86;UBERON:0000153!2.20e-08!94;UBERON:0003076!2.82e-07!12;UBERON:0003057!2.82e-07!12;UBERON:0002420!3.35e-07!8;UBERON:0007245!3.35e-07!8;UBERON:0010009!3.35e-07!8;UBERON:0010011!3.35e-07!8;UBERON:0000454!3.35e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.35e-45,54;UBERON:0001049,3.41e-41,52;UBERON:0005068,3.41e-41,52;UBERON:0006241,3.41e-41,52;UBERON:0007135,3.41e-41,52;UBERON:0001017,6.51e-38,73;UBERON:0001016,1.08e-36,75;UBERON:0002020,2.42e-36,34;UBERON:0002346,3.74e-34,64;UBERON:0003075,3.74e-34,64;UBERON:0007284,3.74e-34,64;UBERON:0000955,1.80e-32,47;UBERON:0006238,1.80e-32,47;UBERON:0002616,8.64e-31,46;UBERON:0010371,5.20e-29,73;UBERON:0004121,5.97e-29,95;UBERON:0000924,5.97e-29,95;UBERON:0006601,5.97e-29,95;UBERON:0003528,1.34e-27,29;UBERON:0002791,1.34e-27,29;UBERON:0001893,1.34e-27,29;UBERON:0003080,2.06e-25,40;UBERON:0002021,2.30e-24,10;UBERON:0000411,2.30e-24,10;UBERON:0001950,2.30e-24,10;UBERON:0002780,8.24e-24,39;UBERON:0001890,8.24e-24,39;UBERON:0006240,8.24e-24,39;UBERON:0003056,1.69e-21,49;UBERON:0010314,1.88e-21,92;UBERON:0002619,1.11e-18,17;UBERON:0000956,2.89e-17,21;UBERON:0001869,2.89e-17,21;UBERON:0000203,2.89e-17,21;UBERON:0003076,1.55e-16,12;UBERON:0003057,1.55e-16,12;UBERON:0000025,1.01e-14,114;UBERON:0004111,2.90e-13,122;UBERON:0002240,2.54e-12,6;UBERON:0005174,2.54e-12,6;UBERON:0001137,2.54e-12,6;UBERON:0002420,1.04e-11,8;UBERON:0007245,1.04e-11,8;UBERON:0010009,1.04e-11,8;UBERON:0010011,1.04e-11,8;UBERON:0000454,1.04e-11,8;UBERON:0001948,3.09e-10,5;UBERON:0002315,3.09e-10,5;UBERON:0011216,3.09e-09,194;UBERON:0002950,1.44e-08,4;UBERON:0001891,1.44e-08,4;UBERON:0009616,1.44e-08,4;UBERON:0010286,1.44e-08,4;UBERON:0000483,9.64e-08,174;UBERON:0004684,1.23e-07,3;UBERON:0002275,1.23e-07,3;UBERON:0000119,1.44e-07,176;UBERON:0002038,9.52e-07,3;UBERON:0009663,9.52e-07,3;UBERON:0009661,9.52e-07,3;UBERON:0000125,9.52e-07,3;UBERON:0002308,9.52e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,2.46625541438102,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,4.28476476605705,5.52171352379034,0.122490799214954,0.287536413054709,0.919218786610021,7.70811166995721,7.15049093277051,7.83393319606842,1.58263545276233,2.01272815925301,1.56274011167028,6.14202597803038,1.12552522006336,2.90316670775939,3.83017161115768,3.27454865837937,1.3047961207771,0,0.302286240427142,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,8.49064311333487,6.0739544975902,0,0,0,0,4.94309110035915,5.94750783664214,0.753926112677186,30.5930803538407,36.0558794835766,6.64921742590592,7.13861557498134,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,1.03481348295606,0,0,0,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0.116765342367169,0.16455984991348,0,0.405344047729279,0.292399974850665,0.219550115291051,0,3.36463917702604,1.3377599609307,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,8.66973185934077,5.62616095642575,0,0,0,0,0,0,0,0,0,0.292255857911312,0,4.4984984299053,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0,0.119372344003136,0.164140899745061,0,9.6421157045465,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0.501572104035363,37.8383734553435,37.2863441570813,43.5400590213941,22.1690605223357,60.2872617398165,61.9422995859554,49.9516650171536,48.1843687449916,43.9548136714678,49.7049899281747,0,0.399024873401031,0.170733605754134,0,0.419226325255965,0.919217542250071,0.888986911206461,0,0,0.252697211763798,0.760437899670719,0.188626341386076,0.655490552289177,0.320125762024346,0.287177344778066,0,0.115884325944855,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.290692833264657,0.470546902076653,0.25384382367503,0.182927972872773,0,0.407412341537585,0.561142271657738,0.355905054372522,0.394017929502254,0,0.464810523557898,0.192906610981141,0.749431733813838,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0.463735671240843|short_description=p2@N28178}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:230085 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80TL4 | |||
|association_with_transcript=0bp_to_ENSMUST00000107975,ENSMUST00000132173,ENSMUST00000151824_5end | |||
|cluster_id=chr4:42929519..42929584,+ | |||
|description=CAGE_peak_2_at_N28178_5end | |||
|id=chr4:42929519..42929584,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.44e-12!23;CL:0000337!1.44e-12!23;CL:0000540!2.21e-07!33;CL:0000047!2.21e-07!33;CL:0000031!2.21e-07!33;CL:0000404!2.21e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.12e-17,23;CL:0000337,4.12e-17,23;CL:0000540,6.51e-11,33;CL:0000047,6.51e-11,33;CL:0000031,6.51e-11,33;CL:0000404,6.51e-11,33;CL:0000393,9.78e-09,39;CL:0000211,9.78e-09,39;CL:0002610,1.23e-07,3;CL:0002319,1.25e-07,43;CL:0000221,2.19e-07,44;CL:0000133,2.19e-07,44;CL:0002614,9.52e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.17e-22!52;UBERON:0005068!4.17e-22!52;UBERON:0006241!4.17e-22!52;UBERON:0007135!4.17e-22!52;UBERON:0002020!3.17e-21!34;UBERON:0000955!1.01e-20!50;UBERON:0006238!1.01e-20!50;UBERON:0002616!6.19e-20!49;UBERON:0001017!1.74e-18!73;UBERON:0005743!1.74e-18!73;UBERON:0000073!1.89e-18!75;UBERON:0001016!1.89e-18!75;UBERON:0000033!1.54e-17!63;UBERON:0002791!2.65e-17!29;UBERON:0003528!2.65e-17!29;UBERON:0001893!2.65e-17!29;UBERON:0002346!2.80e-17!71;UBERON:0003075!2.80e-17!71;UBERON:0007284!2.80e-17!71;UBERON:0003080!1.37e-15!40;UBERON:0004121!2.24e-15!102;UBERON:0000924!2.24e-15!102;UBERON:0006601!2.24e-15!102;UBERON:0002780!7.69e-15!39;UBERON:0001890!7.69e-15!39;UBERON:0006240!7.69e-15!39;UBERON:0003056!8.35e-15!49;UBERON:0000956!1.83e-11!21;UBERON:0001869!1.83e-11!21;UBERON:0000203!1.83e-11!21;UBERON:0002021!3.50e-11!10;UBERON:0000411!3.50e-11!10;UBERON:0001950!3.50e-11!10;UBERON:0002619!4.04e-11!17;UBERON:0007811!3.35e-09!86;UBERON:0000153!2.20e-08!94;UBERON:0003076!2.82e-07!12;UBERON:0003057!2.82e-07!12;UBERON:0002420!3.35e-07!8;UBERON:0007245!3.35e-07!8;UBERON:0010009!3.35e-07!8;UBERON:0010011!3.35e-07!8;UBERON:0000454!3.35e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.35e-45,54;UBERON:0001049,3.41e-41,52;UBERON:0005068,3.41e-41,52;UBERON:0006241,3.41e-41,52;UBERON:0007135,3.41e-41,52;UBERON:0001017,6.51e-38,73;UBERON:0001016,1.08e-36,75;UBERON:0002020,2.42e-36,34;UBERON:0002346,3.74e-34,64;UBERON:0003075,3.74e-34,64;UBERON:0007284,3.74e-34,64;UBERON:0000955,1.80e-32,47;UBERON:0006238,1.80e-32,47;UBERON:0002616,8.64e-31,46;UBERON:0010371,5.20e-29,73;UBERON:0004121,5.97e-29,95;UBERON:0000924,5.97e-29,95;UBERON:0006601,5.97e-29,95;UBERON:0003528,1.34e-27,29;UBERON:0002791,1.34e-27,29;UBERON:0001893,1.34e-27,29;UBERON:0003080,2.06e-25,40;UBERON:0002021,2.30e-24,10;UBERON:0000411,2.30e-24,10;UBERON:0001950,2.30e-24,10;UBERON:0002780,8.24e-24,39;UBERON:0001890,8.24e-24,39;UBERON:0006240,8.24e-24,39;UBERON:0003056,1.69e-21,49;UBERON:0010314,1.88e-21,92;UBERON:0002619,1.11e-18,17;UBERON:0000956,2.89e-17,21;UBERON:0001869,2.89e-17,21;UBERON:0000203,2.89e-17,21;UBERON:0003076,1.55e-16,12;UBERON:0003057,1.55e-16,12;UBERON:0000025,1.01e-14,114;UBERON:0004111,2.90e-13,122;UBERON:0002240,2.54e-12,6;UBERON:0005174,2.54e-12,6;UBERON:0001137,2.54e-12,6;UBERON:0002420,1.04e-11,8;UBERON:0007245,1.04e-11,8;UBERON:0010009,1.04e-11,8;UBERON:0010011,1.04e-11,8;UBERON:0000454,1.04e-11,8;UBERON:0001948,3.09e-10,5;UBERON:0002315,3.09e-10,5;UBERON:0011216,3.09e-09,194;UBERON:0002950,1.44e-08,4;UBERON:0001891,1.44e-08,4;UBERON:0009616,1.44e-08,4;UBERON:0010286,1.44e-08,4;UBERON:0000483,9.64e-08,174;UBERON:0004684,1.23e-07,3;UBERON:0002275,1.23e-07,3;UBERON:0000119,1.44e-07,176;UBERON:0002038,9.52e-07,3;UBERON:0009663,9.52e-07,3;UBERON:0009661,9.52e-07,3;UBERON:0000125,9.52e-07,3;UBERON:0002308,9.52e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,2.46625541438102,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,4.28476476605705,5.52171352379034,0.122490799214954,0.287536413054709,0.919218786610021,7.70811166995721,7.15049093277051,7.83393319606842,1.58263545276233,2.01272815925301,1.56274011167028,6.14202597803038,1.12552522006336,2.90316670775939,3.83017161115768,3.27454865837937,1.3047961207771,0,0.302286240427142,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,8.49064311333487,6.0739544975902,0,0,0,0,4.94309110035915,5.94750783664214,0.753926112677186,30.5930803538407,36.0558794835766,6.64921742590592,7.13861557498134,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,1.03481348295606,0,0,0,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0.116765342367169,0.16455984991348,0,0.405344047729279,0.292399974850665,0.219550115291051,0,3.36463917702604,1.3377599609307,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,8.66973185934077,5.62616095642575,0,0,0,0,0,0,0,0,0,0.292255857911312,0,4.4984984299053,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0,0.119372344003136,0.164140899745061,0,9.6421157045465,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0.501572104035363,37.8383734553435,37.2863441570813,43.5400590213941,22.1690605223357,60.2872617398165,61.9422995859554,49.9516650171536,48.1843687449916,43.9548136714678,49.7049899281747,0,0.399024873401031,0.170733605754134,0,0.419226325255965,0.919217542250071,0.888986911206461,0,0,0.252697211763798,0.760437899670719,0.188626341386076,0.655490552289177,0.320125762024346,0.287177344778066,0,0.115884325944855,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.290692833264657,0.470546902076653,0.25384382367503,0.182927972872773,0,0.407412341537585,0.561142271657738,0.355905054372522,0.394017929502254,0,0.464810523557898,0.192906610981141,0.749431733813838,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0.463735671240843 | |||
|short_description=p2@N28178 | |||
}} |
Revision as of 11:19, 5 August 2015
Short description: | p2@N28178 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_N28178_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000107975, ENSMUST00000132173, ENSMUST00000151824_5end |
EntrezGene: | 230085 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.12e-17 | 23 |
neuroblast (sensu Vertebrata) | 4.12e-17 | 23 |
neuron | 6.51e-11 | 33 |
neuronal stem cell | 6.51e-11 | 33 |
neuroblast | 6.51e-11 | 33 |
electrically signaling cell | 6.51e-11 | 33 |
electrically responsive cell | 9.78e-09 | 39 |
electrically active cell | 9.78e-09 | 39 |
raphe nuclei neuron | 1.23e-07 | 3 |
neural cell | 1.25e-07 | 43 |
ectodermal cell | 2.19e-07 | 44 |
neurectodermal cell | 2.19e-07 | 44 |
neuron of the substantia nigra | 9.52e-07 | 3 |