FFCP PHASE1:Hg19::chr9:73483926..73483937,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80036 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17992 | |||
|TSSclassifier=strong | |||
|UniProt=Q4VXD4 | |||
|association_with_transcript=1bp_to_ENST00000396283_5end | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_4_at_TRPM3_5end | |||
|id=chr9:73483926..73483937,- | |||
|ontology_enrichment_celltype=CL:0002586!1.68e-12!3;CL:0000064!3.67e-12!3;CL:0005012!3.67e-12!3;CL:0000067!3.67e-12!3;CL:0002304!3.67e-12!3;CL:0000149!1.80e-09!4;CL:0000075!3.69e-09!27;CL:0000147!4.77e-09!14;CL:0000710!6.63e-08!20 | |||
|ontology_enrichment_celltype_v019=CL:0002586;7.29e-36;3!CL:0000149;4.31e-27;4!CL:0000064;2.20e-16;3!CL:0000067;2.20e-16;3!CL:0005012;2.20e-16;3!CL:0002304;2.20e-16;3!CL:0000147;3.64e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,6.10e-36,3;CL:0000149,3.78e-27,4;CL:0000064,2.04e-16,3;CL:0000067,2.04e-16,3;CL:0005012,2.04e-16,3;CL:0002304,2.04e-16,3;CL:0000147,3.50e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006222;8.15e-13;1!UBERON:0005754;8.15e-13;1!UBERON:0007297;4.83e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!4.07e-30!86;UBERON:0007284!4.07e-30!86;UBERON:0002346!1.87e-28!90;UBERON:0007625!2.37e-26!11;UBERON:0005743!2.29e-21!86;UBERON:0000970!7.77e-21!20;UBERON:0003056!9.91e-21!61;UBERON:0002104!1.00e-19!21;UBERON:0000073!9.05e-19!94;UBERON:0001016!9.05e-19!94;UBERON:0000019!4.38e-18!19;UBERON:0000047!4.38e-18!19;UBERON:0004088!4.38e-18!19;UBERON:0003072!4.38e-18!19;UBERON:0003071!4.38e-18!19;UBERON:0004128!4.38e-18!19;UBERON:0000020!8.58e-18!23;UBERON:0001032!6.00e-17!24;UBERON:0004456!6.00e-17!24;UBERON:0001456!3.70e-16!21;UBERON:0000033!5.75e-16!123;UBERON:0001049!1.61e-15!57;UBERON:0005068!1.61e-15!57;UBERON:0006241!1.61e-15!57;UBERON:0007135!1.61e-15!57;UBERON:0000488!1.75e-15!4;UBERON:0001017!3.98e-15!82;UBERON:0000153!6.46e-15!129;UBERON:0007811!6.46e-15!129;UBERON:0004121!6.79e-15!169;UBERON:0007023!1.57e-14!115;UBERON:0000924!2.25e-14!173;UBERON:0006601!2.25e-14!173;UBERON:0000966!5.88e-13!5;UBERON:0005388!5.88e-13!5;UBERON:0001802!5.88e-13!5;UBERON:0001896!1.39e-12!3;UBERON:0005290!1.39e-12!3;UBERON:0010096!1.39e-12!3;UBERON:0001781!1.68e-12!3;UBERON:0001782!1.68e-12!3;UBERON:0005424!1.68e-12!3;UBERON:0001778!3.67e-12!3;UBERON:0001775!3.67e-12!3;UBERON:0000955!4.55e-12!69;UBERON:0006238!4.55e-12!69;UBERON:0002298!1.51e-11!8;UBERON:0002616!1.81e-11!59;UBERON:0005085!4.04e-11!29;UBERON:0003076!6.05e-11!15;UBERON:0003057!6.05e-11!15;UBERON:0002203!2.49e-10!6;UBERON:0001768!2.49e-10!6;UBERON:0000483!6.97e-10!309;UBERON:0000119!1.06e-09!312;UBERON:0002308!3.83e-09!9;UBERON:0000125!3.83e-09!9;UBERON:0001801!5.77e-09!14;UBERON:0002780!5.58e-08!41;UBERON:0001890!5.58e-08!41;UBERON:0006240!5.58e-08!41;UBERON:0002360!5.74e-08!2;UBERON:0000094!5.74e-08!2;UBERON:0007645!5.74e-08!2;UBERON:0009663!7.38e-08!7;UBERON:0003080!9.60e-08!42;UBERON:0000475!1.03e-07!365;UBERON:0004733!1.82e-07!12;UBERON:0002028!1.82e-07!12;UBERON:0007277!1.82e-07!12;UBERON:0004732!7.30e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;3.86e-38;5!UBERON:0005388;3.86e-38;5!UBERON:0001802;3.86e-38;5!UBERON:0007625;1.20e-37;11!UBERON:0000970;1.31e-36;20!UBERON:0001896;3.16e-36;3!UBERON:0005290;3.16e-36;3!UBERON:0001781;7.29e-36;3!UBERON:0001782;7.29e-36;3!UBERON:0002104;7.83e-35;21!UBERON:0000020;9.58e-32;23!UBERON:0001032;2.15e-30;24!UBERON:0004456;2.15e-30;24!UBERON:0000019;1.53e-29;19!UBERON:0000047;1.53e-29;19!UBERON:0004088;1.53e-29;19!UBERON:0010230;1.53e-29;19!UBERON:0001456;1.10e-26;21!UBERON:0002298;1.79e-18;6!UBERON:0001778;2.20e-16;3!UBERON:0001775;2.20e-16;3!UBERON:0002336;3.33e-13;1!UBERON:0011215;3.33e-13;1!UBERON:0001018;3.33e-13;1!UBERON:0002473;3.33e-13;1!UBERON:0005340;3.33e-13;1!UBERON:0003544;3.33e-13;1!UBERON:0005970;3.33e-13;1!UBERON:0002316;3.33e-13;1!UBERON:0001020;3.33e-13;1!UBERON:0002437;3.33e-13;1!UBERON:0010371;7.63e-13;31!UBERON:0000998;8.15e-13;1!UBERON:0006868;8.15e-13;1!UBERON:0000488;1.56e-12;4!UBERON:0004733;1.58e-09;12!UBERON:0002028;1.58e-09;12!UBERON:0001444;2.20e-09;48!UBERON:0000033;4.06e-09;50!UBERON:0004732;7.77e-09;13!UBERON:0002203;1.17e-08;6!UBERON:0001768;1.17e-08;6!UBERON:0002200;1.17e-08;6!UBERON:0001801;5.38e-08;14!UBERON:0005162;3.09e-07;2!UBERON:0000122;3.09e-07;2!UBERON:0002360;4.83e-07;2!UBERON:0001954;4.83e-07;2!UBERON:0000094;4.83e-07;2!UBERON:0003022;4.83e-07;2!UBERON:0002421;4.83e-07;2!UBERON:0002600;4.83e-07;2!UBERON:0010743;4.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.06e-37,11;UBERON:0001896,3.36e-36,3;UBERON:0005290,3.36e-36,3;UBERON:0010096,3.36e-36,3;UBERON:0001782,6.10e-36,3;UBERON:0005424,6.10e-36,3;UBERON:0000970,7.32e-35,21;UBERON:0002104,7.32e-35,21;UBERON:0000966,6.56e-32,6;UBERON:0005388,6.56e-32,6;UBERON:0001802,6.56e-32,6;UBERON:0000020,2.03e-30,24;UBERON:0001032,2.03e-30,24;UBERON:0004456,2.03e-30,24;UBERON:0000019,4.47e-28,20;UBERON:0000047,4.47e-28,20;UBERON:0010312,4.47e-28,20;UBERON:0004088,4.47e-28,20;UBERON:0010230,4.47e-28,20;UBERON:0003072,4.47e-28,20;UBERON:0004128,4.47e-28,20;UBERON:0003071,4.47e-28,20;UBERON:0001781,3.78e-27,4;UBERON:0001456,1.76e-25,22;UBERON:0003075,4.02e-22,82;UBERON:0007284,4.02e-22,82;UBERON:0002346,4.98e-21,86;UBERON:0002298,1.84e-18,6;UBERON:0005085,6.20e-18,31;UBERON:0003056,1.50e-17,61;UBERON:0010371,3.89e-17,104;UBERON:0001778,2.04e-16,3;UBERON:0001775,2.04e-16,3;UBERON:0004121,3.05e-13,171;UBERON:0000924,3.05e-13,171;UBERON:0006601,3.05e-13,171;UBERON:0002336,3.33e-13,1;UBERON:0011215,3.33e-13,1;UBERON:0001018,3.33e-13,1;UBERON:0002473,3.33e-13,1;UBERON:0005340,3.33e-13,1;UBERON:0003544,3.33e-13,1;UBERON:0005970,3.33e-13,1;UBERON:0002316,3.33e-13,1;UBERON:0001020,3.33e-13,1;UBERON:0002437,3.33e-13,1;UBERON:0010314,3.64e-13,132;UBERON:0000998,6.06e-13,1;UBERON:0006868,6.06e-13,1;UBERON:0000488,1.47e-12,4;UBERON:0001444,3.93e-11,49;UBERON:0000033,1.16e-09,56;UBERON:0004733,1.60e-09,12;UBERON:0002028,1.60e-09,12;UBERON:0007277,1.60e-09,12;UBERON:0004732,7.88e-09,13;UBERON:0002203,1.13e-08,6;UBERON:0001768,1.13e-08,6;UBERON:0002200,1.13e-08,6;UBERON:0000153,1.15e-08,62;UBERON:0007811,1.15e-08,62;UBERON:0001017,3.53e-08,81;UBERON:0001801,5.31e-08,14;UBERON:0003076,1.02e-07,15;UBERON:0003057,1.02e-07,15;UBERON:0000955,1.28e-07,68;UBERON:0006238,1.28e-07,68;UBERON:0000073,1.83e-07,53;UBERON:0002616,1.83e-07,53;UBERON:0001016,2.72e-07,89;UBERON:0007023,3.08e-07,114;UBERON:0005162,3.09e-07,2;UBERON:0000122,3.09e-07,2;UBERON:0001049,4.74e-07,56;UBERON:0005068,4.74e-07,56;UBERON:0006241,4.74e-07,56;UBERON:0007135,4.74e-07,56;UBERON:0002360,5.28e-07,2;UBERON:0000094,5.28e-07,2;UBERON:0010743,5.28e-07,2;UBERON:0001954,5.60e-07,2;UBERON:0003022,5.60e-07,2;UBERON:0002421,5.60e-07,2;UBERON:0002600,5.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,2.55244006342983,0.886917589850256,1.66886092816939,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.829288440122964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,1.62302566965108,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5402556302375,3.93617574839647,2.60302715731442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72909630335755,0,1.63985112007737,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0730562982461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49823746722733,0,0,0,0,0,0,0,0.86686278029118,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,36.6981885241646,10.0945436898536,3.22901295295194,13.6965148586869,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672567444437648,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,89.2027271324671,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.883889372481891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@TRPM3 | |||
}} |
Revision as of 01:40, 23 January 2014
Short description: | p4@TRPM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRPM3_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 1bp_to_ENST00000396283_5end |
EntrezGene: | TRPM3 |
HGNC: | 17992 |
UniProt: | Q4VXD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 6.10e-36 | 3 |
visual pigment cell | 3.78e-27 | 4 |
ciliated cell | 2.04e-16 | 3 |
ciliated epithelial cell | 2.04e-16 | 3 |
multi-ciliated epithelial cell | 2.04e-16 | 3 |
non-pigmented ciliary epithelial cell | 2.04e-16 | 3 |
pigment cell | 3.50e-08 | 14 |