FFCP PHASE1:Mm9::chr7:151470293..151470304,+: Difference between revisions
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{{FFCP|EntrezGene=210274|HGNC=|MCL_coexpression_id=2|UniProt=D3YZ39,Q80Z38|association_with_transcript=3bp_to_ENSMUST00000097929,NM_001081370,uc009kqf.1_5end|description=CAGE_peak_6_at_Shank2_5end|id=chr7:151470293..151470304,+|ontology_enrichment_celltype=CL:0000117!1.53e-15!23;CL:0000337!1.53e-15!23;CL:0000540!2.32e-14!33;CL:0000047!2.32e-14!33;CL:0000031!2.32e-14!33;CL:0000404!2.32e-14!33;CL:0002319!1.70e-12!43;CL:0000221!5.43e-12!44;CL:0000133!5.43e-12!44;CL:0000393!8.41e-11!39;CL:0000211!8.41e-11!39;CL:0000055!2.01e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.81e-12,23;CL:0000337,2.81e-12,23;CL:0002610,3.67e-08,3;CL:0002614,5.43e-08,3;CL:0000540,7.89e-08,33;CL:0000047,7.89e-08,33;CL:0000031,7.89e-08,33;CL:0000404,7.89e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.74e-34!102;UBERON:0000924!2.74e-34!102;UBERON:0006601!2.74e-34!102;UBERON:0000073!3.69e-34!75;UBERON:0001016!3.69e-34!75;UBERON:0002346!5.75e-34!71;UBERON:0003075!5.75e-34!71;UBERON:0007284!5.75e-34!71;UBERON:0001017!3.91e-33!73;UBERON:0005743!3.91e-33!73;UBERON:0001049!1.06e-28!52;UBERON:0005068!1.06e-28!52;UBERON:0006241!1.06e-28!52;UBERON:0007135!1.06e-28!52;UBERON:0000033!5.47e-28!63;UBERON:0000955!2.09e-27!50;UBERON:0006238!2.09e-27!50;UBERON:0002616!1.90e-26!49;UBERON:0002020!1.28e-24!34;UBERON:0003056!1.50e-23!49;UBERON:0003080!1.39e-21!40;UBERON:0002780!1.27e-20!39;UBERON:0001890!1.27e-20!39;UBERON:0006240!1.27e-20!39;UBERON:0002791!1.86e-20!29;UBERON:0003528!1.86e-20!29;UBERON:0001893!1.86e-20!29;UBERON:0007811!2.41e-17!86;UBERON:0000956!1.46e-15!21;UBERON:0001869!1.46e-15!21;UBERON:0000203!1.46e-15!21;UBERON:0000153!1.95e-14!94;UBERON:0002619!8.57e-13!17;UBERON:0002021!5.50e-12!10;UBERON:0000411!5.50e-12!10;UBERON:0001950!5.50e-12!10;UBERON:0003076!1.56e-07!12;UBERON:0003057!1.56e-07!12;UBERON:0002298!4.86e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.66e-39,54;UBERON:0001017,1.39e-35,73;UBERON:0001049,6.81e-35,52;UBERON:0005068,6.81e-35,52;UBERON:0006241,6.81e-35,52;UBERON:0007135,6.81e-35,52;UBERON:0001016,1.89e-34,75;UBERON:0000955,3.26e-31,47;UBERON:0006238,3.26e-31,47;UBERON:0002616,2.11e-29,46;UBERON:0002346,3.54e-29,64;UBERON:0003075,3.54e-29,64;UBERON:0007284,3.54e-29,64;UBERON:0004121,1.94e-27,95;UBERON:0000924,1.94e-27,95;UBERON:0006601,1.94e-27,95;UBERON:0002020,5.97e-26,34;UBERON:0002021,6.22e-26,10;UBERON:0000411,6.22e-26,10;UBERON:0001950,6.22e-26,10;UBERON:0010371,8.87e-25,73;UBERON:0003080,4.95e-24,40;UBERON:0003528,1.34e-22,29;UBERON:0002791,1.34e-22,29;UBERON:0001893,1.34e-22,29;UBERON:0002780,2.96e-22,39;UBERON:0001890,2.96e-22,39;UBERON:0006240,2.96e-22,39;UBERON:0003056,1.49e-20,49;UBERON:0010314,2.60e-18,92;UBERON:0002619,1.59e-17,17;UBERON:0000956,1.54e-16,21;UBERON:0001869,1.54e-16,21;UBERON:0000203,1.54e-16,21;UBERON:0000025,1.98e-12,114;UBERON:0004111,3.41e-11,122;UBERON:0003076,4.03e-11,12;UBERON:0003057,4.03e-11,12;UBERON:0002950,3.43e-10,4;UBERON:0001891,3.43e-10,4;UBERON:0009616,3.43e-10,4;UBERON:0010286,3.43e-10,4;UBERON:0011216,5.57e-09,194;UBERON:0004684,3.67e-08,3;UBERON:0002275,3.67e-08,3;UBERON:0002038,5.43e-08,3;UBERON:0009663,5.43e-08,3;UBERON:0009661,5.43e-08,3;UBERON:0000125,5.43e-08,3;UBERON:0002308,5.43e-08,3;UBERON:0002420,3.48e-07,8;UBERON:0007245,3.48e-07,8;UBERON:0010009,3.48e-07,8;UBERON:0010011,3.48e-07,8;UBERON:0000454,3.48e-07,8|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0.675029691658453,0.210324961351382,0.856952953211411,1.98781686856452,0.489963196859816,0.862609239164127,0,6.60695285996332,4.21368215681119,1.84327839907492,1.31886287730194,0.914876436024097,0,3.35019598801657,3.37657566019008,3.36156145108982,1.47314292736834,0.711858403995515,1.1183966749518,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,1.17112318804619,1.67557365450764,0,0,0,0,3.59497534571574,1.37250180845588,0.502617408451458,9.73416193076748,8.18289463457058,2.70124457927428,5.353961681236,0.101839363850316,0,0,0,0.910843100738926,0,0,0.30140963567143,0.816437989815934,0.896796041993948,0.468508622798644,1.03481348295606,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,8.41159794256509,0.617427674275707,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,3.39913891117389,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0.404810701674894,0,0.790575555893047,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0.214368379079066,0,7.90652579663893,3.68260189205742,8.02053718815155,6.18671456437275,7.53590771747707,12.0863023582352,10.8003600037089,6.30449684513909,9.06284817968409,8.80192529978094,0,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0,0.256100609619477,0.17230640686684,0,0.231768651889711,0,0,0.294397840268795,0,0.177475806159338,0,0,0.470546902076653,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0|short_description=p6@Shank2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:210274 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YZ39,uniprot:Q80Z38 | |||
|association_with_transcript=3bp_to_ENSMUST00000097929,NM_001081370,uc009kqf.1_5end | |||
|cluster_id=chr7:151470293..151470304,+ | |||
|description=CAGE_peak_6_at_Shank2_5end | |||
|id=chr7:151470293..151470304,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.53e-15!23;CL:0000337!1.53e-15!23;CL:0000540!2.32e-14!33;CL:0000047!2.32e-14!33;CL:0000031!2.32e-14!33;CL:0000404!2.32e-14!33;CL:0002319!1.70e-12!43;CL:0000221!5.43e-12!44;CL:0000133!5.43e-12!44;CL:0000393!8.41e-11!39;CL:0000211!8.41e-11!39;CL:0000055!2.01e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.81e-12,23;CL:0000337,2.81e-12,23;CL:0002610,3.67e-08,3;CL:0002614,5.43e-08,3;CL:0000540,7.89e-08,33;CL:0000047,7.89e-08,33;CL:0000031,7.89e-08,33;CL:0000404,7.89e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.74e-34!102;UBERON:0000924!2.74e-34!102;UBERON:0006601!2.74e-34!102;UBERON:0000073!3.69e-34!75;UBERON:0001016!3.69e-34!75;UBERON:0002346!5.75e-34!71;UBERON:0003075!5.75e-34!71;UBERON:0007284!5.75e-34!71;UBERON:0001017!3.91e-33!73;UBERON:0005743!3.91e-33!73;UBERON:0001049!1.06e-28!52;UBERON:0005068!1.06e-28!52;UBERON:0006241!1.06e-28!52;UBERON:0007135!1.06e-28!52;UBERON:0000033!5.47e-28!63;UBERON:0000955!2.09e-27!50;UBERON:0006238!2.09e-27!50;UBERON:0002616!1.90e-26!49;UBERON:0002020!1.28e-24!34;UBERON:0003056!1.50e-23!49;UBERON:0003080!1.39e-21!40;UBERON:0002780!1.27e-20!39;UBERON:0001890!1.27e-20!39;UBERON:0006240!1.27e-20!39;UBERON:0002791!1.86e-20!29;UBERON:0003528!1.86e-20!29;UBERON:0001893!1.86e-20!29;UBERON:0007811!2.41e-17!86;UBERON:0000956!1.46e-15!21;UBERON:0001869!1.46e-15!21;UBERON:0000203!1.46e-15!21;UBERON:0000153!1.95e-14!94;UBERON:0002619!8.57e-13!17;UBERON:0002021!5.50e-12!10;UBERON:0000411!5.50e-12!10;UBERON:0001950!5.50e-12!10;UBERON:0003076!1.56e-07!12;UBERON:0003057!1.56e-07!12;UBERON:0002298!4.86e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.66e-39,54;UBERON:0001017,1.39e-35,73;UBERON:0001049,6.81e-35,52;UBERON:0005068,6.81e-35,52;UBERON:0006241,6.81e-35,52;UBERON:0007135,6.81e-35,52;UBERON:0001016,1.89e-34,75;UBERON:0000955,3.26e-31,47;UBERON:0006238,3.26e-31,47;UBERON:0002616,2.11e-29,46;UBERON:0002346,3.54e-29,64;UBERON:0003075,3.54e-29,64;UBERON:0007284,3.54e-29,64;UBERON:0004121,1.94e-27,95;UBERON:0000924,1.94e-27,95;UBERON:0006601,1.94e-27,95;UBERON:0002020,5.97e-26,34;UBERON:0002021,6.22e-26,10;UBERON:0000411,6.22e-26,10;UBERON:0001950,6.22e-26,10;UBERON:0010371,8.87e-25,73;UBERON:0003080,4.95e-24,40;UBERON:0003528,1.34e-22,29;UBERON:0002791,1.34e-22,29;UBERON:0001893,1.34e-22,29;UBERON:0002780,2.96e-22,39;UBERON:0001890,2.96e-22,39;UBERON:0006240,2.96e-22,39;UBERON:0003056,1.49e-20,49;UBERON:0010314,2.60e-18,92;UBERON:0002619,1.59e-17,17;UBERON:0000956,1.54e-16,21;UBERON:0001869,1.54e-16,21;UBERON:0000203,1.54e-16,21;UBERON:0000025,1.98e-12,114;UBERON:0004111,3.41e-11,122;UBERON:0003076,4.03e-11,12;UBERON:0003057,4.03e-11,12;UBERON:0002950,3.43e-10,4;UBERON:0001891,3.43e-10,4;UBERON:0009616,3.43e-10,4;UBERON:0010286,3.43e-10,4;UBERON:0011216,5.57e-09,194;UBERON:0004684,3.67e-08,3;UBERON:0002275,3.67e-08,3;UBERON:0002038,5.43e-08,3;UBERON:0009663,5.43e-08,3;UBERON:0009661,5.43e-08,3;UBERON:0000125,5.43e-08,3;UBERON:0002308,5.43e-08,3;UBERON:0002420,3.48e-07,8;UBERON:0007245,3.48e-07,8;UBERON:0010009,3.48e-07,8;UBERON:0010011,3.48e-07,8;UBERON:0000454,3.48e-07,8 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0.675029691658453,0.210324961351382,0.856952953211411,1.98781686856452,0.489963196859816,0.862609239164127,0,6.60695285996332,4.21368215681119,1.84327839907492,1.31886287730194,0.914876436024097,0,3.35019598801657,3.37657566019008,3.36156145108982,1.47314292736834,0.711858403995515,1.1183966749518,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,1.17112318804619,1.67557365450764,0,0,0,0,3.59497534571574,1.37250180845588,0.502617408451458,9.73416193076748,8.18289463457058,2.70124457927428,5.353961681236,0.101839363850316,0,0,0,0.910843100738926,0,0,0.30140963567143,0.816437989815934,0.896796041993948,0.468508622798644,1.03481348295606,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,8.41159794256509,0.617427674275707,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,3.39913891117389,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0.404810701674894,0,0.790575555893047,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0.214368379079066,0,7.90652579663893,3.68260189205742,8.02053718815155,6.18671456437275,7.53590771747707,12.0863023582352,10.8003600037089,6.30449684513909,9.06284817968409,8.80192529978094,0,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0,0.256100609619477,0.17230640686684,0,0.231768651889711,0,0,0.294397840268795,0,0.177475806159338,0,0,0.470546902076653,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p6@Shank2 | |||
}} |
Revision as of 15:32, 4 August 2015
Short description: | p6@Shank2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Shank2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 3bp_to_ENSMUST00000097929, NM_001081370, uc009kqf.1_5end |
EntrezGene: | 210274 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.81e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.81e-12 | 23 |
raphe nuclei neuron | 3.67e-08 | 3 |
neuron of the substantia nigra | 5.43e-08 | 3 |
neuron | 7.89e-08 | 33 |
neuronal stem cell | 7.89e-08 | 33 |
neuroblast | 7.89e-08 | 33 |
electrically signaling cell | 7.89e-08 | 33 |