FFCP PHASE1:Mm9::chr8:120807507..120807518,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12554|HGNC=|MCL_coexpression_id=3658|UniProt=Q9WTR5|association_with_transcript=-114bp_to_ENSMUST00000117160_5end|description=CAGE_peak_8_at_Cdh13_5end|id=chr8:120807507..120807518,+|ontology_enrichment_celltype=CL:0000117!5.57e-13!23;CL:0000337!5.57e-13!23;CL:0000540!1.20e-08!33;CL:0000047!1.20e-08!33;CL:0000031!1.20e-08!33;CL:0000404!1.20e-08!33;CL:0002319!3.95e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,6.65e-21,23;CL:0000337,6.65e-21,23;CL:0000540,4.84e-13,33;CL:0000047,4.84e-13,33;CL:0000031,4.84e-13,33;CL:0000404,4.84e-13,33;CL:0002609,7.28e-12,6;CL:0000393,2.71e-10,39;CL:0000211,2.71e-10,39;CL:0002319,6.71e-09,43;CL:0000221,1.36e-08,44;CL:0000133,1.36e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.43e-18!52;UBERON:0005068!1.43e-18!52;UBERON:0006241!1.43e-18!52;UBERON:0007135!1.43e-18!52;UBERON:0002020!6.62e-18!34;UBERON:0001017!2.54e-16!73;UBERON:0005743!2.54e-16!73;UBERON:0000073!7.56e-16!75;UBERON:0001016!7.56e-16!75;UBERON:0000955!2.31e-15!50;UBERON:0006238!2.31e-15!50;UBERON:0003080!5.52e-15!40;UBERON:0002616!6.68e-15!49;UBERON:0002780!1.47e-14!39;UBERON:0001890!1.47e-14!39;UBERON:0006240!1.47e-14!39;UBERON:0004121!2.35e-14!102;UBERON:0000924!2.35e-14!102;UBERON:0006601!2.35e-14!102;UBERON:0002346!3.56e-14!71;UBERON:0003075!3.56e-14!71;UBERON:0007284!3.56e-14!71;UBERON:0002791!4.02e-14!29;UBERON:0003528!4.02e-14!29;UBERON:0001893!4.02e-14!29;UBERON:0003056!1.23e-13!49;UBERON:0000033!1.39e-13!63;UBERON:0000956!3.34e-10!21;UBERON:0001869!3.34e-10!21;UBERON:0000203!3.34e-10!21;UBERON:0000025!1.60e-09!114;UBERON:0004111!2.33e-09!122;UBERON:0002619!7.20e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.89e-25,34;UBERON:0003528,9.74e-18,29;UBERON:0002791,9.74e-18,29;UBERON:0001893,9.74e-18,29;UBERON:0001049,2.86e-17,52;UBERON:0005068,2.86e-17,52;UBERON:0006241,2.86e-17,52;UBERON:0007135,2.86e-17,52;UBERON:0000073,2.35e-16,54;UBERON:0002780,4.15e-15,39;UBERON:0001890,4.15e-15,39;UBERON:0006240,4.15e-15,39;UBERON:0003080,1.39e-14,40;UBERON:0001017,2.53e-13,73;UBERON:0001016,9.29e-13,75;UBERON:0002346,1.16e-12,64;UBERON:0003075,1.16e-12,64;UBERON:0007284,1.16e-12,64;UBERON:0010371,2.27e-12,73;UBERON:0000956,3.47e-12,21;UBERON:0001869,3.47e-12,21;UBERON:0000203,3.47e-12,21;UBERON:0002616,6.35e-12,46;UBERON:0000955,1.51e-11,47;UBERON:0006238,1.51e-11,47;UBERON:0003056,7.60e-11,49;UBERON:0004121,3.31e-10,95;UBERON:0000924,3.31e-10,95;UBERON:0006601,3.31e-10,95;UBERON:0001948,6.99e-10,5;UBERON:0002315,6.99e-10,5;UBERON:0010314,3.76e-09,92;UBERON:0002619,8.58e-09,17;UBERON:0002240,3.99e-08,6;UBERON:0005174,3.99e-08,6;UBERON:0001137,3.99e-08,6;UBERON:0000025,2.29e-07,114;UBERON:0004111,5.83e-07,122;UBERON:0002420,7.89e-07,8;UBERON:0007245,7.89e-07,8;UBERON:0010009,7.89e-07,8;UBERON:0010011,7.89e-07,8;UBERON:0000454,7.89e-07,8|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.893618560807968,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,1.26766280701236,0,0,0,0,0,0.299600110518405,0,4.04389488003063,3.37514845829227,4.20649922702764,5.14171771926846,2.42955395046775,2.9397791811589,2.97120960156533,7.35375029288017,0,0.638436690425939,0.921639199537461,1.05509030184155,1.37231465403614,0.52091337055676,0.558365998002762,1.12552522006336,1.22238598221448,2.94628585473668,3.70166370077668,2.60959224155421,0,0.302286240427142,2.6087803983151,0,0,0,0,0,0.421333260395256,0.340860645156116,0.779358013808606,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,1.44599356919912,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.878342391034642,0,0,0,0,0,0.898743836428936,4.11750542536764,11.4345460422707,0.521472960576829,1.27857728665165,2.49345653471472,2.59586020908412,0,0,0,0.210441855886474,0.130120442962704,0,0,0.452114453507145,0.544291993210623,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.556094498451196,1.39300866608867,0.61734640922383,0,0,0,0,0.621377317606506,0.469052119962192,0.36012412292203,0.710234206755631,0.787056926989615,0.462801338662135,0.697601834251224,0.804820204198858,0.700592054203017,1.81015834904829,1.47750717671186,1.62137619091711,0.730999937126662,0.439100230582101,0.536825675041487,0.630869845692382,1.44066457330998,0,0,0.426576501070468,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.624075346229121,0,0,0,0.554259570499814,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0,0,0.315270288212382,0,0.318909537314974,0,0.172684981865896,0.144649058581512,0,0,1.47529281905711,0.275936746304732,0.963303539926752,0.820481806145422,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.258717367565509,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,0.469343416127421,0,0,0.8244312647074,1.77610869365496,0.603129249281559,0.119372344003136,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.432021363287205,0.418176592028937,1.52853794622324,0.134864346384821,0.41326727862668,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0.0762068066549998,0.100826185136841,0,0,0,0.906921534460845,0,0,0,0.772758376128762,0,0.183151624267265,1.07184189539533,0,3.3885110557024,0.460325236507177,2.29158205375759,2.23409137046794,0.685082519770642,0.755393897389701,2.02506750069542,0,1.35942722695261,1.55328093525546,0,0,0,0.486213434136588,0.209613162627982,0.919217542250071,1.77797382241292,0.824140228955577,0.64183841918363,0.758091635291392,0.760437899670719,1.13175804831646,0.842773567228942,0.960377286073039,1.37845125493472,1.42888107384922,0.463537303779422,1.15745532278223,0.412085900803307,0.441596760403192,1.02860775715625,1.4198064492747,0.476872379894642,1.45346416632329,0.941093804153306,0.761531471025089,0.365855945745545,0.789209134313529,1.08643291076689,1.12228454331548,0.711810108745045,1.0835493061312,0.409231043169689,0.619747364743864,0.771626443924566,1.99848462350357,2.10538447600868,1.07435527024149,0.57386499620653,0.661774257358546,0.231867835620421|short_description=p8@Cdh13}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12554 | |||
|HGNC= | |||
|MCL_coexpression_id=3658 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9WTR5 | |||
|association_with_transcript=-114bp_to_ENSMUST00000117160_5end | |||
|cluster_id=chr8:120807507..120807518,+ | |||
|description=CAGE_peak_8_at_Cdh13_5end | |||
|id=chr8:120807507..120807518,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.57e-13!23;CL:0000337!5.57e-13!23;CL:0000540!1.20e-08!33;CL:0000047!1.20e-08!33;CL:0000031!1.20e-08!33;CL:0000404!1.20e-08!33;CL:0002319!3.95e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.65e-21,23;CL:0000337,6.65e-21,23;CL:0000540,4.84e-13,33;CL:0000047,4.84e-13,33;CL:0000031,4.84e-13,33;CL:0000404,4.84e-13,33;CL:0002609,7.28e-12,6;CL:0000393,2.71e-10,39;CL:0000211,2.71e-10,39;CL:0002319,6.71e-09,43;CL:0000221,1.36e-08,44;CL:0000133,1.36e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.43e-18!52;UBERON:0005068!1.43e-18!52;UBERON:0006241!1.43e-18!52;UBERON:0007135!1.43e-18!52;UBERON:0002020!6.62e-18!34;UBERON:0001017!2.54e-16!73;UBERON:0005743!2.54e-16!73;UBERON:0000073!7.56e-16!75;UBERON:0001016!7.56e-16!75;UBERON:0000955!2.31e-15!50;UBERON:0006238!2.31e-15!50;UBERON:0003080!5.52e-15!40;UBERON:0002616!6.68e-15!49;UBERON:0002780!1.47e-14!39;UBERON:0001890!1.47e-14!39;UBERON:0006240!1.47e-14!39;UBERON:0004121!2.35e-14!102;UBERON:0000924!2.35e-14!102;UBERON:0006601!2.35e-14!102;UBERON:0002346!3.56e-14!71;UBERON:0003075!3.56e-14!71;UBERON:0007284!3.56e-14!71;UBERON:0002791!4.02e-14!29;UBERON:0003528!4.02e-14!29;UBERON:0001893!4.02e-14!29;UBERON:0003056!1.23e-13!49;UBERON:0000033!1.39e-13!63;UBERON:0000956!3.34e-10!21;UBERON:0001869!3.34e-10!21;UBERON:0000203!3.34e-10!21;UBERON:0000025!1.60e-09!114;UBERON:0004111!2.33e-09!122;UBERON:0002619!7.20e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.89e-25,34;UBERON:0003528,9.74e-18,29;UBERON:0002791,9.74e-18,29;UBERON:0001893,9.74e-18,29;UBERON:0001049,2.86e-17,52;UBERON:0005068,2.86e-17,52;UBERON:0006241,2.86e-17,52;UBERON:0007135,2.86e-17,52;UBERON:0000073,2.35e-16,54;UBERON:0002780,4.15e-15,39;UBERON:0001890,4.15e-15,39;UBERON:0006240,4.15e-15,39;UBERON:0003080,1.39e-14,40;UBERON:0001017,2.53e-13,73;UBERON:0001016,9.29e-13,75;UBERON:0002346,1.16e-12,64;UBERON:0003075,1.16e-12,64;UBERON:0007284,1.16e-12,64;UBERON:0010371,2.27e-12,73;UBERON:0000956,3.47e-12,21;UBERON:0001869,3.47e-12,21;UBERON:0000203,3.47e-12,21;UBERON:0002616,6.35e-12,46;UBERON:0000955,1.51e-11,47;UBERON:0006238,1.51e-11,47;UBERON:0003056,7.60e-11,49;UBERON:0004121,3.31e-10,95;UBERON:0000924,3.31e-10,95;UBERON:0006601,3.31e-10,95;UBERON:0001948,6.99e-10,5;UBERON:0002315,6.99e-10,5;UBERON:0010314,3.76e-09,92;UBERON:0002619,8.58e-09,17;UBERON:0002240,3.99e-08,6;UBERON:0005174,3.99e-08,6;UBERON:0001137,3.99e-08,6;UBERON:0000025,2.29e-07,114;UBERON:0004111,5.83e-07,122;UBERON:0002420,7.89e-07,8;UBERON:0007245,7.89e-07,8;UBERON:0010009,7.89e-07,8;UBERON:0010011,7.89e-07,8;UBERON:0000454,7.89e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.893618560807968,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,1.26766280701236,0,0,0,0,0,0.299600110518405,0,4.04389488003063,3.37514845829227,4.20649922702764,5.14171771926846,2.42955395046775,2.9397791811589,2.97120960156533,7.35375029288017,0,0.638436690425939,0.921639199537461,1.05509030184155,1.37231465403614,0.52091337055676,0.558365998002762,1.12552522006336,1.22238598221448,2.94628585473668,3.70166370077668,2.60959224155421,0,0.302286240427142,2.6087803983151,0,0,0,0,0,0.421333260395256,0.340860645156116,0.779358013808606,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,1.44599356919912,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.878342391034642,0,0,0,0,0,0.898743836428936,4.11750542536764,11.4345460422707,0.521472960576829,1.27857728665165,2.49345653471472,2.59586020908412,0,0,0,0.210441855886474,0.130120442962704,0,0,0.452114453507145,0.544291993210623,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.556094498451196,1.39300866608867,0.61734640922383,0,0,0,0,0.621377317606506,0.469052119962192,0.36012412292203,0.710234206755631,0.787056926989615,0.462801338662135,0.697601834251224,0.804820204198858,0.700592054203017,1.81015834904829,1.47750717671186,1.62137619091711,0.730999937126662,0.439100230582101,0.536825675041487,0.630869845692382,1.44066457330998,0,0,0.426576501070468,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.624075346229121,0,0,0,0.554259570499814,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0,0,0.315270288212382,0,0.318909537314974,0,0.172684981865896,0.144649058581512,0,0,1.47529281905711,0.275936746304732,0.963303539926752,0.820481806145422,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.258717367565509,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,0.469343416127421,0,0,0.8244312647074,1.77610869365496,0.603129249281559,0.119372344003136,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.432021363287205,0.418176592028937,1.52853794622324,0.134864346384821,0.41326727862668,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0.0762068066549998,0.100826185136841,0,0,0,0.906921534460845,0,0,0,0.772758376128762,0,0.183151624267265,1.07184189539533,0,3.3885110557024,0.460325236507177,2.29158205375759,2.23409137046794,0.685082519770642,0.755393897389701,2.02506750069542,0,1.35942722695261,1.55328093525546,0,0,0,0.486213434136588,0.209613162627982,0.919217542250071,1.77797382241292,0.824140228955577,0.64183841918363,0.758091635291392,0.760437899670719,1.13175804831646,0.842773567228942,0.960377286073039,1.37845125493472,1.42888107384922,0.463537303779422,1.15745532278223,0.412085900803307,0.441596760403192,1.02860775715625,1.4198064492747,0.476872379894642,1.45346416632329,0.941093804153306,0.761531471025089,0.365855945745545,0.789209134313529,1.08643291076689,1.12228454331548,0.711810108745045,1.0835493061312,0.409231043169689,0.619747364743864,0.771626443924566,1.99848462350357,2.10538447600868,1.07435527024149,0.57386499620653,0.661774257358546,0.231867835620421 | |||
|short_description=p8@Cdh13 | |||
}} |
Revision as of 00:29, 6 August 2015
Short description: | p8@Cdh13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Cdh13_5end |
Coexpression cluster: | MCL_coexpression_mm9:3658 |
Association with transcript: | -114bp_to_ENSMUST00000117160_5end |
EntrezGene: | 12554 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.65e-21 | 23 |
neuroblast (sensu Vertebrata) | 6.65e-21 | 23 |
neuron | 4.84e-13 | 33 |
neuronal stem cell | 4.84e-13 | 33 |
neuroblast | 4.84e-13 | 33 |
electrically signaling cell | 4.84e-13 | 33 |
neuron of cerebral cortex | 7.28e-12 | 6 |
electrically responsive cell | 2.71e-10 | 39 |
electrically active cell | 2.71e-10 | 39 |
neural cell | 6.71e-09 | 43 |
ectodermal cell | 1.36e-08 | 44 |
neurectodermal cell | 1.36e-08 | 44 |