FFCP PHASE1:Mm9::chrX:91881383..91881392,+: Difference between revisions
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{{FFCP|EntrezGene=14853|HGNC=|MCL_coexpression_id=1|UniProt=Q149F3,Q8BPH0|association_with_transcript=-15bp_to_ENSMUST00000096368,NM_008179,uc009tto.1_5end|description=CAGE_peak_2_at_Gspt2_5end|id=chrX:91881383..91881392,+|ontology_enrichment_celltype=CL:0000393!5.32e-11!39;CL:0000211!5.32e-11!39;CL:0000055!8.52e-10!50;CL:0000540!1.00e-09!33;CL:0000047!1.00e-09!33;CL:0000031!1.00e-09!33;CL:0000404!1.00e-09!33;CL:0002319!4.42e-09!43;CL:0000221!4.47e-09!44;CL:0000133!4.47e-09!44;CL:0000117!1.06e-08!23;CL:0000337!1.06e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,6.72e-13,23;CL:0000337,6.72e-13,23;CL:0000393,1.25e-08,39;CL:0000211,1.25e-08,39;CL:0000540,4.50e-08,33;CL:0000047,4.50e-08,33;CL:0000031,4.50e-08,33;CL:0000404,4.50e-08,33;CL:0002610,6.58e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.23e-20!73;UBERON:0005743!1.23e-20!73;UBERON:0000073!2.10e-20!75;UBERON:0001016!2.10e-20!75;UBERON:0004121!8.66e-17!102;UBERON:0000924!8.66e-17!102;UBERON:0006601!8.66e-17!102;UBERON:0002346!1.58e-16!71;UBERON:0003075!1.58e-16!71;UBERON:0007284!1.58e-16!71;UBERON:0001049!3.10e-15!52;UBERON:0005068!3.10e-15!52;UBERON:0006241!3.10e-15!52;UBERON:0007135!3.10e-15!52;UBERON:0000955!1.03e-14!50;UBERON:0006238!1.03e-14!50;UBERON:0000033!1.39e-14!63;UBERON:0002616!2.10e-14!49;UBERON:0002020!1.79e-12!34;UBERON:0003056!4.08e-12!49;UBERON:0003080!3.27e-11!40;UBERON:0002780!1.37e-10!39;UBERON:0001890!1.37e-10!39;UBERON:0006240!1.37e-10!39;UBERON:0002791!2.39e-10!29;UBERON:0003528!2.39e-10!29;UBERON:0001893!2.39e-10!29;UBERON:0002021!2.06e-07!10;UBERON:0000411!2.06e-07!10;UBERON:0001950!2.06e-07!10;UBERON:0000956!6.76e-07!21;UBERON:0001869!6.76e-07!21;UBERON:0000203!6.76e-07!21;UBERON:0002619!9.35e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.18e-31,54;UBERON:0001049,1.38e-27,52;UBERON:0005068,1.38e-27,52;UBERON:0006241,1.38e-27,52;UBERON:0007135,1.38e-27,52;UBERON:0001017,2.39e-26,73;UBERON:0001016,2.00e-25,75;UBERON:0002616,1.01e-22,46;UBERON:0002346,1.21e-22,64;UBERON:0003075,1.21e-22,64;UBERON:0007284,1.21e-22,64;UBERON:0002020,3.41e-22,34;UBERON:0000955,4.20e-22,47;UBERON:0006238,4.20e-22,47;UBERON:0003080,4.06e-20,40;UBERON:0004121,1.27e-19,95;UBERON:0000924,1.27e-19,95;UBERON:0006601,1.27e-19,95;UBERON:0003528,4.26e-19,29;UBERON:0002791,4.26e-19,29;UBERON:0001893,4.26e-19,29;UBERON:0010371,6.21e-19,73;UBERON:0002780,1.61e-18,39;UBERON:0001890,1.61e-18,39;UBERON:0006240,1.61e-18,39;UBERON:0003056,6.59e-17,49;UBERON:0002021,5.57e-16,10;UBERON:0000411,5.57e-16,10;UBERON:0001950,5.57e-16,10;UBERON:0010314,1.39e-14,92;UBERON:0000025,2.24e-12,114;UBERON:0004111,4.37e-12,122;UBERON:0002420,6.80e-12,8;UBERON:0007245,6.80e-12,8;UBERON:0010009,6.80e-12,8;UBERON:0010011,6.80e-12,8;UBERON:0000454,6.80e-12,8;UBERON:0002619,1.50e-10,17;UBERON:0000956,7.64e-10,21;UBERON:0001869,7.64e-10,21;UBERON:0000203,7.64e-10,21;UBERON:0002950,9.90e-09,4;UBERON:0001891,9.90e-09,4;UBERON:0009616,9.90e-09,4;UBERON:0010286,9.90e-09,4;UBERON:0003076,6.20e-08,12;UBERON:0003057,6.20e-08,12;UBERON:0004684,6.58e-08,3;UBERON:0002275,6.58e-08,3;UBERON:0000369,6.14e-07,5;UBERON:0002435,6.14e-07,5;UBERON:0000204,6.14e-07,5;UBERON:0010082,6.14e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0,0,0,0,0,0.0797721589953364,0,0,0.333109761815663,0,0,0,0,0,0.935476191661768,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,1.51076181570693,0.405507724878058,0.183546752161682,0,0.218025156380447,0.219686182734472,0.972149495371417,0.699932108126813,0,0,0,0,0.514518872071894,0.573066879877513,1.03134418455488,0.809265843438391,0.528990979272033,1.90149421051854,0.677689064138264,0,0,0,0.7104801149461,0.299600110518405,1.15265491596466,0.311068836925433,0.135005938331691,0.420649922702764,1.71390590642282,0.441737081903227,0.61245399607477,0.383381884072945,0,4.40463523997555,2.68143409978894,3.07213066512487,1.31886287730194,1.37231465403614,2.08365348222704,1.3959149950069,1.12552522006336,3.66715794664344,2.35702868378934,1.56608848879013,0.559198337475902,0.227178579999552,0.226714680320357,0.289864488701678,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,0,0.22836775943812,0,0.29688427812965,0,0.913396434936424,0,0.452167921657868,0.587943535678524,0.628332956648377,0,0.289198713839823,0,0.970601099684455,0,0,0,0.878342391034642,1.67557365450764,0.255457055208591,0.239630249011841,1.19980546198682,0.762421362438388,2.84602214869163,3.66000482254901,0.125654352112864,1.39059456153821,1.79000820131231,2.0778804455956,1.29793010454206,1.42575109390443,0.248813941220186,1.51633655060205,0.210441855886474,0.650602214813519,0.229902104433473,0.540186389416048,1.05493372485001,0.680364991513279,0.2562274405697,0.281105173679186,0.258703370739016,0.646703978798527,0.567318240503458,0,0.219195732427575,0.278047249225598,0.696504333044333,0,0,0.702213187313235,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14853 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q149F3,uniprot:Q8BPH0 | |||
|association_with_transcript=-15bp_to_ENSMUST00000096368,NM_008179,uc009tto.1_5end | |||
|cluster_id=chrX:91881383..91881392,+ | |||
|description=CAGE_peak_2_at_Gspt2_5end | |||
|id=chrX:91881383..91881392,+ | |||
|ontology_enrichment_celltype=CL:0000393!5.32e-11!39;CL:0000211!5.32e-11!39;CL:0000055!8.52e-10!50;CL:0000540!1.00e-09!33;CL:0000047!1.00e-09!33;CL:0000031!1.00e-09!33;CL:0000404!1.00e-09!33;CL:0002319!4.42e-09!43;CL:0000221!4.47e-09!44;CL:0000133!4.47e-09!44;CL:0000117!1.06e-08!23;CL:0000337!1.06e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.72e-13,23;CL:0000337,6.72e-13,23;CL:0000393,1.25e-08,39;CL:0000211,1.25e-08,39;CL:0000540,4.50e-08,33;CL:0000047,4.50e-08,33;CL:0000031,4.50e-08,33;CL:0000404,4.50e-08,33;CL:0002610,6.58e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.23e-20!73;UBERON:0005743!1.23e-20!73;UBERON:0000073!2.10e-20!75;UBERON:0001016!2.10e-20!75;UBERON:0004121!8.66e-17!102;UBERON:0000924!8.66e-17!102;UBERON:0006601!8.66e-17!102;UBERON:0002346!1.58e-16!71;UBERON:0003075!1.58e-16!71;UBERON:0007284!1.58e-16!71;UBERON:0001049!3.10e-15!52;UBERON:0005068!3.10e-15!52;UBERON:0006241!3.10e-15!52;UBERON:0007135!3.10e-15!52;UBERON:0000955!1.03e-14!50;UBERON:0006238!1.03e-14!50;UBERON:0000033!1.39e-14!63;UBERON:0002616!2.10e-14!49;UBERON:0002020!1.79e-12!34;UBERON:0003056!4.08e-12!49;UBERON:0003080!3.27e-11!40;UBERON:0002780!1.37e-10!39;UBERON:0001890!1.37e-10!39;UBERON:0006240!1.37e-10!39;UBERON:0002791!2.39e-10!29;UBERON:0003528!2.39e-10!29;UBERON:0001893!2.39e-10!29;UBERON:0002021!2.06e-07!10;UBERON:0000411!2.06e-07!10;UBERON:0001950!2.06e-07!10;UBERON:0000956!6.76e-07!21;UBERON:0001869!6.76e-07!21;UBERON:0000203!6.76e-07!21;UBERON:0002619!9.35e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.18e-31,54;UBERON:0001049,1.38e-27,52;UBERON:0005068,1.38e-27,52;UBERON:0006241,1.38e-27,52;UBERON:0007135,1.38e-27,52;UBERON:0001017,2.39e-26,73;UBERON:0001016,2.00e-25,75;UBERON:0002616,1.01e-22,46;UBERON:0002346,1.21e-22,64;UBERON:0003075,1.21e-22,64;UBERON:0007284,1.21e-22,64;UBERON:0002020,3.41e-22,34;UBERON:0000955,4.20e-22,47;UBERON:0006238,4.20e-22,47;UBERON:0003080,4.06e-20,40;UBERON:0004121,1.27e-19,95;UBERON:0000924,1.27e-19,95;UBERON:0006601,1.27e-19,95;UBERON:0003528,4.26e-19,29;UBERON:0002791,4.26e-19,29;UBERON:0001893,4.26e-19,29;UBERON:0010371,6.21e-19,73;UBERON:0002780,1.61e-18,39;UBERON:0001890,1.61e-18,39;UBERON:0006240,1.61e-18,39;UBERON:0003056,6.59e-17,49;UBERON:0002021,5.57e-16,10;UBERON:0000411,5.57e-16,10;UBERON:0001950,5.57e-16,10;UBERON:0010314,1.39e-14,92;UBERON:0000025,2.24e-12,114;UBERON:0004111,4.37e-12,122;UBERON:0002420,6.80e-12,8;UBERON:0007245,6.80e-12,8;UBERON:0010009,6.80e-12,8;UBERON:0010011,6.80e-12,8;UBERON:0000454,6.80e-12,8;UBERON:0002619,1.50e-10,17;UBERON:0000956,7.64e-10,21;UBERON:0001869,7.64e-10,21;UBERON:0000203,7.64e-10,21;UBERON:0002950,9.90e-09,4;UBERON:0001891,9.90e-09,4;UBERON:0009616,9.90e-09,4;UBERON:0010286,9.90e-09,4;UBERON:0003076,6.20e-08,12;UBERON:0003057,6.20e-08,12;UBERON:0004684,6.58e-08,3;UBERON:0002275,6.58e-08,3;UBERON:0000369,6.14e-07,5;UBERON:0002435,6.14e-07,5;UBERON:0000204,6.14e-07,5;UBERON:0010082,6.14e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0,0,0,0,0,0.0797721589953364,0,0,0.333109761815663,0,0,0,0,0,0.935476191661768,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,1.51076181570693,0.405507724878058,0.183546752161682,0,0.218025156380447,0.219686182734472,0.972149495371417,0.699932108126813,0,0,0,0,0.514518872071894,0.573066879877513,1.03134418455488,0.809265843438391,0.528990979272033,1.90149421051854,0.677689064138264,0,0,0,0.7104801149461,0.299600110518405,1.15265491596466,0.311068836925433,0.135005938331691,0.420649922702764,1.71390590642282,0.441737081903227,0.61245399607477,0.383381884072945,0,4.40463523997555,2.68143409978894,3.07213066512487,1.31886287730194,1.37231465403614,2.08365348222704,1.3959149950069,1.12552522006336,3.66715794664344,2.35702868378934,1.56608848879013,0.559198337475902,0.227178579999552,0.226714680320357,0.289864488701678,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,0,0.22836775943812,0,0.29688427812965,0,0.913396434936424,0,0.452167921657868,0.587943535678524,0.628332956648377,0,0.289198713839823,0,0.970601099684455,0,0,0,0.878342391034642,1.67557365450764,0.255457055208591,0.239630249011841,1.19980546198682,0.762421362438388,2.84602214869163,3.66000482254901,0.125654352112864,1.39059456153821,1.79000820131231,2.0778804455956,1.29793010454206,1.42575109390443,0.248813941220186,1.51633655060205,0.210441855886474,0.650602214813519,0.229902104433473,0.540186389416048,1.05493372485001,0.680364991513279,0.2562274405697,0.281105173679186,0.258703370739016,0.646703978798527,0.567318240503458,0,0.219195732427575,0.278047249225598,0.696504333044333,0,0,0.702213187313235,0.51469581422943,0.568326998791185,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.308534225774757,0.465067889500816,0,0.350296027101508,0,0.164167464079095,0,0,0,0,1.26173969138476,0.205809224758569,0,0,0.213288250535234,0.464473343720877,0.644337306610467,0.403367049246685,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0,0,0.216138049874694,0,0.379335801906163,0,0,0.203651327845314,0,0.140271639780637,0.316182685621286,0,0.470996183524124,0.493588655687202,0.296452627087149,0,0,0,0,0,0.25462585178142,0.863088412352432,0.486405680325106,0,0,0,0,0,0.358794827043824,0,0,0.37898282354097,0,0,0.234690248288502,0.670025029767263,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,1.50791283939272,0,0,0,2.56880943980467,1.99259867206745,0.163934945376675,0.252470927204373,0.94652465824877,0.390438744296638,0.215423397732799,0.477937595905104,0.668396022247182,0.566153061577665,0.404810701674894,0.292255857911312,0.790575555893047,0.642642632843614,0.425820255624806,0.35613120733451,0.488660878060728,0.164970122972535,0,0.485561272309963,0.604647113929502,0.943025398779491,0,0,0,0.727067458955011,0,0,0,0,1.70219802876894,0.18006109403131,0,0.214337035031592,0.532020700926821,0.356737635204141,0,0.913394847343798,0.469343416127421,0.21183207086382,0.882113592219848,0,0,0.120625849856312,0.119372344003136,0,0,2.03967832211561,0,0.412773735926445,0,0.188368457004691,0.136694227721025,0,0.339956859987711,0.979660166265606,0.690999869022119,0,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,0.218362563746178,0,0.330613822901344,0,0.259229946583586,0,0,0.448549638131936,0.165458490457098,0.777804753376191,0.129159823477731,0.675824501963113,0.938857909166032,1.0416350787516,0.419437377702843,1.20792060413003,0,0,0,0,0.25984164595559,0,0.198681354781265,0,0,0.201932899896295,0,0,0,0.0962118416403295,0,0.226730383615211,0,0.538283139656854,0,0.19318959403219,0.563047426353546,0.36630324853453,0,2.00628841614145,1.12950368523413,0.920650473014354,1.14579102687879,2.40594455281163,2.74033007908257,5.2877572817279,2.02506750069542,2.70192721934532,1.81256963593682,1.55328093525546,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0.287177344778066,0,0.463537303779422,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.581385666529314,0.0941093804153306,0.169229215783353,0.73171189149109,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,0.382576664137687,0.220591419119515,0.695603506861264 | |||
|short_description=p2@Gspt2 | |||
}} |
Revision as of 10:59, 6 August 2015
Short description: | p2@Gspt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gspt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -15bp_to_ENSMUST00000096368, NM_008179, uc009tto.1_5end |
EntrezGene: | 14853 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.72e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.72e-13 | 23 |
electrically responsive cell | 1.25e-08 | 39 |
electrically active cell | 1.25e-08 | 39 |
neuron | 4.50e-08 | 33 |
neuronal stem cell | 4.50e-08 | 33 |
neuroblast | 4.50e-08 | 33 |
electrically signaling cell | 4.50e-08 | 33 |
raphe nuclei neuron | 6.58e-08 | 3 |