FFCP PHASE1:Mm9::chrX:91881439..91881450,+: Difference between revisions
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{{FFCP|EntrezGene=14853|HGNC=|UniProt=|association_with_transcript=24bp_to_ENSMUST00000137033,uc009ttp.1_5end|description=CAGE_peak_3_at_Gspt2_5end|id=chrX:91881439..91881450,+|ontology_enrichment_celltype=CL:0000540!3.87e-11!33;CL:0000047!3.87e-11!33;CL:0000031!3.87e-11!33;CL:0000404!3.87e-11!33;CL:0000117!2.18e-09!23;CL:0000337!2.18e-09!23;CL:0002319!5.27e-09!43;CL:0000393!5.45e-09!39;CL:0000211!5.45e-09!39;CL:0000221!7.37e-09!44;CL:0000133!7.37e-09!44;CL:0000055!6.40e-08!50|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.75e-21!73;UBERON:0005743!1.75e-21!73;UBERON:0000073!2.42e-21!75;UBERON:0001016!2.42e-21!75;UBERON:0004121!8.83e-18!102;UBERON:0000924!8.83e-18!102;UBERON:0006601!8.83e-18!102;UBERON:0002346!1.59e-17!71;UBERON:0003075!1.59e-17!71;UBERON:0007284!1.59e-17!71;UBERON:0000955!2.11e-15!50;UBERON:0006238!2.11e-15!50;UBERON:0001049!3.96e-15!52;UBERON:0005068!3.96e-15!52;UBERON:0006241!3.96e-15!52;UBERON:0007135!3.96e-15!52;UBERON:0002616!8.27e-15!49;UBERON:0000033!1.51e-14!63;UBERON:0002020!8.45e-13!34;UBERON:0003056!8.61e-13!49;UBERON:0003080!2.22e-12!40;UBERON:0002780!7.97e-12!39;UBERON:0001890!7.97e-12!39;UBERON:0006240!7.97e-12!39;UBERON:0002791!2.25e-11!29;UBERON:0003528!2.25e-11!29;UBERON:0001893!2.25e-11!29;UBERON:0000956!2.38e-07!21;UBERON:0001869!2.38e-07!21;UBERON:0000203!2.38e-07!21;UBERON:0005156!9.03e-07!26;UBERON:0000990!9.03e-07!26|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.18e-16,47;UBERON:0006238,1.18e-16,47;UBERON:0000073,1.21e-15,54;UBERON:0001017,1.89e-15,73;UBERON:0002616,2.28e-15,46;UBERON:0001016,7.18e-15,75;UBERON:0003080,1.38e-14,40;UBERON:0001049,1.45e-14,52;UBERON:0005068,1.45e-14,52;UBERON:0006241,1.45e-14,52;UBERON:0007135,1.45e-14,52;UBERON:0002021,1.90e-14,10;UBERON:0000411,1.90e-14,10;UBERON:0001950,1.90e-14,10;UBERON:0002780,2.41e-13,39;UBERON:0001890,2.41e-13,39;UBERON:0006240,2.41e-13,39;UBERON:0003528,3.40e-13,29;UBERON:0002791,3.40e-13,29;UBERON:0001893,3.40e-13,29;UBERON:0003056,4.16e-11,49;UBERON:0002346,6.94e-11,64;UBERON:0003075,6.94e-11,64;UBERON:0007284,6.94e-11,64;UBERON:0002020,9.23e-11,34;UBERON:0004121,1.97e-10,95;UBERON:0000924,1.97e-10,95;UBERON:0006601,1.97e-10,95;UBERON:0002619,4.46e-10,17;UBERON:0000080,7.19e-10,4;UBERON:0005904,7.19e-10,4;UBERON:0006947,7.19e-10,4;UBERON:0002120,7.19e-10,4;UBERON:0004054,7.19e-10,4;UBERON:0004875,7.19e-10,4;UBERON:0004876,7.19e-10,4;UBERON:0005721,7.19e-10,4;UBERON:0005754,7.19e-10,4;UBERON:0007297,7.19e-10,4;UBERON:0000956,9.55e-10,21;UBERON:0001869,9.55e-10,21;UBERON:0000203,9.55e-10,21;UBERON:0010371,6.21e-09,73;UBERON:0003135,2.24e-08,15;UBERON:0003101,9.10e-08,16;UBERON:0000079,9.10e-08,16;UBERON:0001301,1.60e-07,3;UBERON:0006555,1.60e-07,3;UBERON:0005103,1.60e-07,3;UBERON:0000083,1.60e-07,3;UBERON:0009201,1.60e-07,3;UBERON:0004819,1.60e-07,3;UBERON:0006553,1.60e-07,3;UBERON:0003074,1.60e-07,3;UBERON:0003060,1.60e-07,3;UBERON:0000473,8.63e-07,14|phase1_expression=0.320297694209588,0,0,0.30246421130683,0.500895729946347,0.503637815735669,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.510259740906419,0,0,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0.219686182734472,0,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0,0.606949382578793,2.64495489636016,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0.405017814995072,0.841299845405528,0.571301968807607,0.662605622854841,0.857435594504678,0.479227355091182,0,2.20231761998777,0.893811366596314,1.99688493233117,0.791317726381163,0.823388792421687,1.56274011167028,0.837548997004143,2.8138130501584,1.06958773443767,0.294628585473668,0.711858403995515,0.745597783301202,0.302904773332736,0.0755715601067855,0,0.860423876981386,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0,1.01104889002957,0.22836775943812,0.258937883647172,0.29688427812965,0.173485326766136,0.608930956624282,0.230615497256059,0.150722640552623,0.587943535678524,0.251333182659351,0,0,0,0,0,0,0,1.17112318804619,0.83778682725382,0,0,0.599902730993408,0.508280908292259,1.19832511523858,1.83000241127451,0.628271760564322,2.25971616249959,1.79000820131231,1.0389402227978,1.1356888414743,1.2220723662038,1.36847667671102,5.81262344397452,0,0.650602214813519,0,0.180062129805349,0.753524089178575,0.612328492361951,0.384341160854549,0.562210347358373,0.776110112217047,0.215567992932842,0.378212160335639,0.351902248327898,0,1.11218899690239,0,0,0.398068533636986,1.40442637462647,0,0.568326998791185,0,0.469052119962192,0.720248245844059,0,0.196764231747404,0,0.232533944750408,0,0,0,0.164167464079095,0,0.146199987425332,0,0,2.3131894342054,0.823236899034275,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0.403367049246685,0.2223780438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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14853 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=24bp_to_ENSMUST00000137033,uc009ttp.1_5end | |||
|cluster_id=chrX:91881439..91881450,+ | |||
|description=CAGE_peak_3_at_Gspt2_5end | |||
|id=chrX:91881439..91881450,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.87e-11!33;CL:0000047!3.87e-11!33;CL:0000031!3.87e-11!33;CL:0000404!3.87e-11!33;CL:0000117!2.18e-09!23;CL:0000337!2.18e-09!23;CL:0002319!5.27e-09!43;CL:0000393!5.45e-09!39;CL:0000211!5.45e-09!39;CL:0000221!7.37e-09!44;CL:0000133!7.37e-09!44;CL:0000055!6.40e-08!50 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.75e-21!73;UBERON:0005743!1.75e-21!73;UBERON:0000073!2.42e-21!75;UBERON:0001016!2.42e-21!75;UBERON:0004121!8.83e-18!102;UBERON:0000924!8.83e-18!102;UBERON:0006601!8.83e-18!102;UBERON:0002346!1.59e-17!71;UBERON:0003075!1.59e-17!71;UBERON:0007284!1.59e-17!71;UBERON:0000955!2.11e-15!50;UBERON:0006238!2.11e-15!50;UBERON:0001049!3.96e-15!52;UBERON:0005068!3.96e-15!52;UBERON:0006241!3.96e-15!52;UBERON:0007135!3.96e-15!52;UBERON:0002616!8.27e-15!49;UBERON:0000033!1.51e-14!63;UBERON:0002020!8.45e-13!34;UBERON:0003056!8.61e-13!49;UBERON:0003080!2.22e-12!40;UBERON:0002780!7.97e-12!39;UBERON:0001890!7.97e-12!39;UBERON:0006240!7.97e-12!39;UBERON:0002791!2.25e-11!29;UBERON:0003528!2.25e-11!29;UBERON:0001893!2.25e-11!29;UBERON:0000956!2.38e-07!21;UBERON:0001869!2.38e-07!21;UBERON:0000203!2.38e-07!21;UBERON:0005156!9.03e-07!26;UBERON:0000990!9.03e-07!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.18e-16,47;UBERON:0006238,1.18e-16,47;UBERON:0000073,1.21e-15,54;UBERON:0001017,1.89e-15,73;UBERON:0002616,2.28e-15,46;UBERON:0001016,7.18e-15,75;UBERON:0003080,1.38e-14,40;UBERON:0001049,1.45e-14,52;UBERON:0005068,1.45e-14,52;UBERON:0006241,1.45e-14,52;UBERON:0007135,1.45e-14,52;UBERON:0002021,1.90e-14,10;UBERON:0000411,1.90e-14,10;UBERON:0001950,1.90e-14,10;UBERON:0002780,2.41e-13,39;UBERON:0001890,2.41e-13,39;UBERON:0006240,2.41e-13,39;UBERON:0003528,3.40e-13,29;UBERON:0002791,3.40e-13,29;UBERON:0001893,3.40e-13,29;UBERON:0003056,4.16e-11,49;UBERON:0002346,6.94e-11,64;UBERON:0003075,6.94e-11,64;UBERON:0007284,6.94e-11,64;UBERON:0002020,9.23e-11,34;UBERON:0004121,1.97e-10,95;UBERON:0000924,1.97e-10,95;UBERON:0006601,1.97e-10,95;UBERON:0002619,4.46e-10,17;UBERON:0000080,7.19e-10,4;UBERON:0005904,7.19e-10,4;UBERON:0006947,7.19e-10,4;UBERON:0002120,7.19e-10,4;UBERON:0004054,7.19e-10,4;UBERON:0004875,7.19e-10,4;UBERON:0004876,7.19e-10,4;UBERON:0005721,7.19e-10,4;UBERON:0005754,7.19e-10,4;UBERON:0007297,7.19e-10,4;UBERON:0000956,9.55e-10,21;UBERON:0001869,9.55e-10,21;UBERON:0000203,9.55e-10,21;UBERON:0010371,6.21e-09,73;UBERON:0003135,2.24e-08,15;UBERON:0003101,9.10e-08,16;UBERON:0000079,9.10e-08,16;UBERON:0001301,1.60e-07,3;UBERON:0006555,1.60e-07,3;UBERON:0005103,1.60e-07,3;UBERON:0000083,1.60e-07,3;UBERON:0009201,1.60e-07,3;UBERON:0004819,1.60e-07,3;UBERON:0006553,1.60e-07,3;UBERON:0003074,1.60e-07,3;UBERON:0003060,1.60e-07,3;UBERON:0000473,8.63e-07,14 | |||
|phase1_expression=0.320297694209588,0,0,0.30246421130683,0.500895729946347,0.503637815735669,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.510259740906419,0,0,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0.219686182734472,0,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0,0.606949382578793,2.64495489636016,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0.405017814995072,0.841299845405528,0.571301968807607,0.662605622854841,0.857435594504678,0.479227355091182,0,2.20231761998777,0.893811366596314,1.99688493233117,0.791317726381163,0.823388792421687,1.56274011167028,0.837548997004143,2.8138130501584,1.06958773443767,0.294628585473668,0.711858403995515,0.745597783301202,0.302904773332736,0.0755715601067855,0,0.860423876981386,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0,1.01104889002957,0.22836775943812,0.258937883647172,0.29688427812965,0.173485326766136,0.608930956624282,0.230615497256059,0.150722640552623,0.587943535678524,0.251333182659351,0,0,0,0,0,0,0,1.17112318804619,0.83778682725382,0,0,0.599902730993408,0.508280908292259,1.19832511523858,1.83000241127451,0.628271760564322,2.25971616249959,1.79000820131231,1.0389402227978,1.1356888414743,1.2220723662038,1.36847667671102,5.81262344397452,0,0.650602214813519,0,0.180062129805349,0.753524089178575,0.612328492361951,0.384341160854549,0.562210347358373,0.776110112217047,0.215567992932842,0.378212160335639,0.351902248327898,0,1.11218899690239,0,0,0.398068533636986,1.40442637462647,0,0.568326998791185,0,0.469052119962192,0.720248245844059,0,0.196764231747404,0,0.232533944750408,0,0,0,0.164167464079095,0,0.146199987425332,0,0,2.3131894342054,0.823236899034275,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0,0,0.38992817423824,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0.407302655690628,0.193952487167626,0.0701358198903186,0.316182685621286,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0,0,0.327726629431476,0,0,0,0,0,0,0.80275294993896,1.64096361229084,0.491804836130026,0,0.631016438832513,0.780877488593277,0.861693590931196,0.477937595905104,0.891194696329576,0.283076530788832,0.404810701674894,0.876767573733936,0,1.28528526568723,0.567760340833074,0.35613120733451,0.162886959353576,0.494910368917606,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0.775284879504663,0,0,0.316036757935816,0,1.03135543248187,0,1.08036656418786,0.258717367565509,0.857348140126369,0,0.713475270408282,0.658196082408484,0,0.469343416127421,0.21183207086382,0.882113592219848,0,0,0.0603129249281559,0,0.164140899745061,0,1.29797711407357,0.170870880797853,0.206386867963223,0,0,0,0,0.169978429993855,0.559805809294632,0,0,0.632671987162271,0,0,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0.388844919875379,0,0.56369293868419,0.149516546043979,0.165458490457098,0.388902376688095,0.516639293910924,1.01373675294467,1.5256441023948,1.0416350787516,1.78260885523708,0.966336483304024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335769232728157,0,0.187682475451182,0.36630324853453,0.214368379079066,6.01886524842436,3.3885110557024,2.30162618253588,6.87474616127276,1.3748254587495,0,2.2661816921691,0.675022500231806,1.35096360967266,1.81256963593682,1.55328093525546,0.31136204275253,0,0,0,0.419226325255965,0,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.115884325944855,0,0,0,0,0.70990322463735,0,0,0.0941093804153306,0.25384382367503,0.182927972872773,0,0.679020569229309,0.561142271657738,0.355905054372522,0,0.409231043169689,0.154936841185966,0.192906610981141,0.999242311751784,0,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p3@Gspt2 | |||
}} |
Revision as of 10:59, 6 August 2015
Short description: | p3@Gspt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gspt2_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENSMUST00000137033, uc009ttp.1_5end |
EntrezGene: | 14853 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data