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FFCP PHASE1:Mm9::chr6:30755031..30755044,+: Difference between revisions

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|id=chr6:30755031..30755044,+
|id=chr6:30755031..30755044,+
|ontology_enrichment_celltype=CL:0000117!3.90e-11!23;CL:0000337!3.90e-11!23
|ontology_enrichment_celltype=CL:0000117!3.90e-11!23;CL:0000337!3.90e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.84e-12,23;CL:0000337,1.84e-12,23;CL:0000540,1.89e-07,33;CL:0000047,1.89e-07,33;CL:0000031,1.89e-07,33;CL:0000404,1.89e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!4.32e-16!34;UBERON:0001049!5.18e-16!52;UBERON:0005068!5.18e-16!52;UBERON:0006241!5.18e-16!52;UBERON:0007135!5.18e-16!52;UBERON:0000955!5.22e-15!50;UBERON:0006238!5.22e-15!50;UBERON:0002346!7.70e-15!71;UBERON:0003075!7.70e-15!71;UBERON:0007284!7.70e-15!71;UBERON:0002616!1.61e-14!49;UBERON:0001017!1.31e-13!73;UBERON:0005743!1.31e-13!73;UBERON:0000033!1.99e-13!63;UBERON:0002791!5.35e-13!29;UBERON:0003528!5.35e-13!29;UBERON:0001893!5.35e-13!29;UBERON:0000073!1.12e-12!75;UBERON:0001016!1.12e-12!75;UBERON:0003056!3.07e-12!49;UBERON:0004121!3.23e-12!102;UBERON:0000924!3.23e-12!102;UBERON:0006601!3.23e-12!102;UBERON:0003080!1.34e-11!40;UBERON:0002780!5.28e-11!39;UBERON:0001890!5.28e-11!39;UBERON:0006240!5.28e-11!39;UBERON:0000025!4.52e-10!114;UBERON:0002021!5.26e-09!10;UBERON:0000411!5.26e-09!10;UBERON:0001950!5.26e-09!10;UBERON:0000956!6.84e-08!21;UBERON:0001869!6.84e-08!21;UBERON:0000203!6.84e-08!21;UBERON:0004111!7.04e-08!122;UBERON:0007811!1.86e-07!86;UBERON:0002619!3.39e-07!17;UBERON:0002420!8.47e-07!8;UBERON:0007245!8.47e-07!8;UBERON:0010009!8.47e-07!8;UBERON:0010011!8.47e-07!8;UBERON:0000454!8.47e-07!8
|ontology_enrichment_uberon=UBERON:0002020!4.32e-16!34;UBERON:0001049!5.18e-16!52;UBERON:0005068!5.18e-16!52;UBERON:0006241!5.18e-16!52;UBERON:0007135!5.18e-16!52;UBERON:0000955!5.22e-15!50;UBERON:0006238!5.22e-15!50;UBERON:0002346!7.70e-15!71;UBERON:0003075!7.70e-15!71;UBERON:0007284!7.70e-15!71;UBERON:0002616!1.61e-14!49;UBERON:0001017!1.31e-13!73;UBERON:0005743!1.31e-13!73;UBERON:0000033!1.99e-13!63;UBERON:0002791!5.35e-13!29;UBERON:0003528!5.35e-13!29;UBERON:0001893!5.35e-13!29;UBERON:0000073!1.12e-12!75;UBERON:0001016!1.12e-12!75;UBERON:0003056!3.07e-12!49;UBERON:0004121!3.23e-12!102;UBERON:0000924!3.23e-12!102;UBERON:0006601!3.23e-12!102;UBERON:0003080!1.34e-11!40;UBERON:0002780!5.28e-11!39;UBERON:0001890!5.28e-11!39;UBERON:0006240!5.28e-11!39;UBERON:0000025!4.52e-10!114;UBERON:0002021!5.26e-09!10;UBERON:0000411!5.26e-09!10;UBERON:0001950!5.26e-09!10;UBERON:0000956!6.84e-08!21;UBERON:0001869!6.84e-08!21;UBERON:0000203!6.84e-08!21;UBERON:0004111!7.04e-08!122;UBERON:0007811!1.86e-07!86;UBERON:0002619!3.39e-07!17;UBERON:0002420!8.47e-07!8;UBERON:0007245!8.47e-07!8;UBERON:0010009!8.47e-07!8;UBERON:0010011!8.47e-07!8;UBERON:0000454!8.47e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.13e-28,54;UBERON:0001049,1.56e-25,52;UBERON:0005068,1.56e-25,52;UBERON:0006241,1.56e-25,52;UBERON:0007135,1.56e-25,52;UBERON:0002346,2.23e-24,64;UBERON:0003075,2.23e-24,64;UBERON:0007284,2.23e-24,64;UBERON:0002020,2.47e-24,34;UBERON:0001017,6.21e-24,73;UBERON:0001016,5.41e-23,75;UBERON:0000955,4.43e-21,47;UBERON:0006238,4.43e-21,47;UBERON:0002616,3.46e-20,46;UBERON:0003528,3.51e-20,29;UBERON:0002791,3.51e-20,29;UBERON:0001893,3.51e-20,29;UBERON:0004121,4.52e-20,95;UBERON:0000924,4.52e-20,95;UBERON:0006601,4.52e-20,95;UBERON:0010371,4.71e-20,73;UBERON:0003056,4.07e-18,49;UBERON:0003080,1.52e-17,40;UBERON:0002780,1.90e-16,39;UBERON:0001890,1.90e-16,39;UBERON:0006240,1.90e-16,39;UBERON:0002021,2.94e-16,10;UBERON:0000411,2.94e-16,10;UBERON:0001950,2.94e-16,10;UBERON:0010314,9.40e-15,92;UBERON:0002619,4.85e-12,17;UBERON:0002420,6.48e-12,8;UBERON:0007245,6.48e-12,8;UBERON:0010009,6.48e-12,8;UBERON:0010011,6.48e-12,8;UBERON:0000454,6.48e-12,8;UBERON:0000025,5.15e-11,114;UBERON:0000956,1.04e-10,21;UBERON:0001869,1.04e-10,21;UBERON:0000203,1.04e-10,21;UBERON:0004111,1.30e-09,122;UBERON:0003076,1.14e-08,12;UBERON:0003057,1.14e-08,12;UBERON:0000369,8.76e-08,5;UBERON:0002435,8.76e-08,5;UBERON:0000204,8.76e-08,5;UBERON:0010082,8.76e-08,5;UBERON:0002950,5.76e-07,4;UBERON:0001891,5.76e-07,4;UBERON:0009616,5.76e-07,4;UBERON:0010286,5.76e-07,4
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,4.04632921719196,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.630974884054146,0.856952953211411,1.54607978666129,0.367472397644862,0.383381884072945,0,19.82085857989,12.5133591323484,22.8873734551803,2.37395317914349,4.7573574673253,4.68822033501084,3.62937898701795,7.31591393041184,21.5445529365302,32.4091444021034,14.6642831223076,3.16879057903011,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.587943535678524,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,0,1.17112318804619,1.04723353406728,0,0,0,0,4.19413790333504,4.11750542536764,5.27748278874031,2.78118912307642,3.83573185995496,2.70124457927428,4.05603157669394,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,1.05493372485001,1.02054748726992,1.7935920839879,0.187403449119458,2.58703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0.232533944750408,0.268273401399619,0.817357396570186,0.16455984991348,1.80584210487005,0.324275238183423,0,0,0.268412837520744,1.47202963994889,4.83651678182637,0,0,0.213288250535234,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0.795825888164603,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0.203651327845314,0.581857461502877,0.911765658574141,0.316182685621286,0.442830443938806,0,0,0,0,0,0,0,0.482354319504834,0,0,1.94562272130042,0,14.3768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0,0.482443521363367,0.184753190166605,0,0.162964976442026,0,0.469380496577004,0.167506257441816,0.238043640886014,3.51240566144038,0.630540576424764,3.10050565508285,1.11618338060241,0.81931657357869,0.518054945597687,0.144649058581512,0,0,0,0,3.85321415970701,5.74337264301796,0,0,0,0,0,0,0,0,0.404810701674894,0,0.395287777946524,1.28528526568723,0,0,0.651547837414304,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0.712994756769443,0,0,0,0,0.540183282093931,0,0,0,0,0.329098041204242,0.304464949114599,0,0.42366414172764,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0.328281799490123,0,11.1255181206306,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0.443068581523732,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4605700194485,13.8097570952153,21.7700295106971,11.3423100346834,4.7955776383945,16.6186657425734,6.75022500231806,10.8077088773813,16.7662691324156,13.9795284172991,0,1.19707462020309,0.170733605754134,0.486213434136588,0,0.367687016900028,0.666740183404846,0.824140228955577,0.320919209591815,0.758091635291392,0.50695859978048,0.188626341386076,1.21733959710847,0.640251524048693,0.459483751644906,1.42888107384922,1.0429589335037,1.35036454324594,1.64834360321323,0.883193520806384,1.37147700954166,0.887379030796687,0.238436189947321,1.16277133305863,0.564656282491984,0.507687647350059,1.64635175585495,2.10455769150274,0.950628796921032,0.561142271657738,1.18635018124174,2.1670986122624,3.27384834535751,0.464810523557898,0.192906610981141,0.999242311751784,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.463735671240843
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,4.04632921719196,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.630974884054146,0.856952953211411,1.54607978666129,0.367472397644862,0.383381884072945,0,19.82085857989,12.5133591323484,22.8873734551803,2.37395317914349,4.7573574673253,4.68822033501084,3.62937898701795,7.31591393041184,21.5445529365302,32.4091444021034,14.6642831223076,3.16879057903011,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.587943535678524,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,0,1.17112318804619,1.04723353406728,0,0,0,0,4.19413790333504,4.11750542536764,5.27748278874031,2.78118912307642,3.83573185995496,2.70124457927428,4.05603157669394,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,1.05493372485001,1.02054748726992,1.7935920839879,0.187403449119458,2.58703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0.232533944750408,0.268273401399619,0.817357396570186,0.16455984991348,1.80584210487005,0.324275238183423,0,0,0.268412837520744,1.47202963994889,4.83651678182637,0,0,0.213288250535234,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0.795825888164603,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0.203651327845314,0.581857461502877,0.911765658574141,0.316182685621286,0.442830443938806,0,0,0,0,0,0,0,0.482354319504834,0,0,1.94562272130042,0,14.3768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0,0.482443521363367,0.184753190166605,0,0.162964976442026,0,0.469380496577004,0.167506257441816,0.238043640886014,3.51240566144038,0.630540576424764,3.10050565508285,1.11618338060241,0.81931657357869,0.518054945597687,0.144649058581512,0,0,0,0,3.85321415970701,5.74337264301796,0,0,0,0,0,0,0,0,0.404810701674894,0,0.395287777946524,1.28528526568723,0,0,0.651547837414304,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0.712994756769443,0,0,0,0,0.540183282093931,0,0,0,0,0.329098041204242,0.304464949114599,0,0.42366414172764,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0.328281799490123,0,11.1255181206306,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0.443068581523732,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4605700194485,13.8097570952153,21.7700295106971,11.3423100346834,4.7955776383945,16.6186657425734,6.75022500231806,10.8077088773813,16.7662691324156,13.9795284172991,0,1.19707462020309,0.170733605754134,0.486213434136588,0,0.367687016900028,0.666740183404846,0.824140228955577,0.320919209591815,0.758091635291392,0.50695859978048,0.188626341386076,1.21733959710847,0.640251524048693,0.459483751644906,1.42888107384922,1.0429589335037,1.35036454324594,1.64834360321323,0.883193520806384,1.37147700954166,0.887379030796687,0.238436189947321,1.16277133305863,0.564656282491984,0.507687647350059,1.64635175585495,2.10455769150274,0.950628796921032,0.561142271657738,1.18635018124174,2.1670986122624,3.27384834535751,0.464810523557898,0.192906610981141,0.999242311751784,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.463735671240843
|short_description=p3@uc009bfw.1
|short_description=p3@uc009bfw.1
}}
}}

Revision as of 05:32, 14 November 2012

Short description:p3@uc009bfw.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_uc009bfw.1_5end
Coexpression cluster:MCL_coexpression_mm9:145
Association with transcript: 247bp_to_uc009bfw.1_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@uc009bfw.1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.54
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D632.41
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G14.84
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A35.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C911.13
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A121.46
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.77
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A516.62
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.84e-1223
neuroblast (sensu Vertebrata)1.84e-1223
neuron1.89e-0733
neuronal stem cell1.89e-0733
neuroblast1.89e-0733
electrically signaling cell1.89e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.13e-2854
neural tube1.56e-2552
neural rod1.56e-2552
future spinal cord1.56e-2552
neural keel1.56e-2552
neurectoderm2.23e-2464
neural plate2.23e-2464
presumptive neural plate2.23e-2464
gray matter2.47e-2434
central nervous system6.21e-2473
nervous system5.41e-2375
brain4.43e-2147
future brain4.43e-2147
regional part of brain3.46e-2046
brain grey matter3.51e-2029
regional part of telencephalon3.51e-2029
telencephalon3.51e-2029
ectoderm-derived structure4.52e-2095
ectoderm4.52e-2095
presumptive ectoderm4.52e-2095
ecto-epithelium4.71e-2073
pre-chordal neural plate4.07e-1849
anterior neural tube1.52e-1740
regional part of forebrain1.90e-1639
forebrain1.90e-1639
future forebrain1.90e-1639
occipital lobe2.94e-1610
visual cortex2.94e-1610
neocortex2.94e-1610
structure with developmental contribution from neural crest9.40e-1592
regional part of cerebral cortex4.85e-1217
basal ganglion6.48e-128
nuclear complex of neuraxis6.48e-128
aggregate regional part of brain6.48e-128
collection of basal ganglia6.48e-128
cerebral subcortex6.48e-128
tube5.15e-11114
cerebral cortex1.04e-1021
cerebral hemisphere1.04e-1021
pallium1.04e-1021
anatomical conduit1.30e-09122
posterior neural tube1.14e-0812
chordal neural plate1.14e-0812
corpus striatum8.76e-085
striatum8.76e-085
ventral part of telencephalon8.76e-085
future corpus striatum8.76e-085
regional part of midbrain5.76e-074
midbrain5.76e-074
presumptive midbrain5.76e-074
midbrain neural tube5.76e-074







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