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FFCP PHASE1:Mm9::chrX:149574617..149574634,+: Difference between revisions

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|id=chrX:149574617..149574634,+
|id=chrX:149574617..149574634,+
|ontology_enrichment_celltype=CL:0000540!8.79e-09!33;CL:0000047!8.79e-09!33;CL:0000031!8.79e-09!33;CL:0000404!8.79e-09!33;CL:0000393!2.57e-07!39;CL:0000211!2.57e-07!39
|ontology_enrichment_celltype=CL:0000540!8.79e-09!33;CL:0000047!8.79e-09!33;CL:0000031!8.79e-09!33;CL:0000404!8.79e-09!33;CL:0000393!2.57e-07!39;CL:0000211!2.57e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000540,2.26e-14,33;CL:0000047,2.26e-14,33;CL:0000031,2.26e-14,33;CL:0000404,2.26e-14,33;CL:0000117,1.67e-12,23;CL:0000337,1.67e-12,23;CL:0000393,2.70e-12,39;CL:0000211,2.70e-12,39;CL:0002319,1.48e-09,43;CL:0000221,3.35e-09,44;CL:0000133,3.35e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.97e-22!73;UBERON:0005743!1.97e-22!73;UBERON:0000073!1.95e-21!75;UBERON:0001016!1.95e-21!75;UBERON:0002346!2.56e-19!71;UBERON:0003075!2.56e-19!71;UBERON:0007284!2.56e-19!71;UBERON:0004121!8.08e-18!102;UBERON:0000924!8.08e-18!102;UBERON:0006601!8.08e-18!102;UBERON:0001049!9.92e-18!52;UBERON:0005068!9.92e-18!52;UBERON:0006241!9.92e-18!52;UBERON:0007135!9.92e-18!52;UBERON:0000033!3.28e-17!63;UBERON:0000955!5.65e-17!50;UBERON:0006238!5.65e-17!50;UBERON:0002616!2.11e-16!49;UBERON:0003056!1.04e-13!49;UBERON:0003080!1.07e-13!40;UBERON:0007811!2.27e-13!86;UBERON:0002780!5.13e-13!39;UBERON:0001890!5.13e-13!39;UBERON:0006240!5.13e-13!39;UBERON:0000153!7.83e-13!94;UBERON:0002020!1.77e-10!34;UBERON:0002791!4.04e-08!29;UBERON:0003528!4.04e-08!29;UBERON:0001893!4.04e-08!29;UBERON:0002021!4.32e-07!10;UBERON:0000411!4.32e-07!10;UBERON:0001950!4.32e-07!10
|ontology_enrichment_uberon=UBERON:0001017!1.97e-22!73;UBERON:0005743!1.97e-22!73;UBERON:0000073!1.95e-21!75;UBERON:0001016!1.95e-21!75;UBERON:0002346!2.56e-19!71;UBERON:0003075!2.56e-19!71;UBERON:0007284!2.56e-19!71;UBERON:0004121!8.08e-18!102;UBERON:0000924!8.08e-18!102;UBERON:0006601!8.08e-18!102;UBERON:0001049!9.92e-18!52;UBERON:0005068!9.92e-18!52;UBERON:0006241!9.92e-18!52;UBERON:0007135!9.92e-18!52;UBERON:0000033!3.28e-17!63;UBERON:0000955!5.65e-17!50;UBERON:0006238!5.65e-17!50;UBERON:0002616!2.11e-16!49;UBERON:0003056!1.04e-13!49;UBERON:0003080!1.07e-13!40;UBERON:0007811!2.27e-13!86;UBERON:0002780!5.13e-13!39;UBERON:0001890!5.13e-13!39;UBERON:0006240!5.13e-13!39;UBERON:0000153!7.83e-13!94;UBERON:0002020!1.77e-10!34;UBERON:0002791!4.04e-08!29;UBERON:0003528!4.04e-08!29;UBERON:0001893!4.04e-08!29;UBERON:0002021!4.32e-07!10;UBERON:0000411!4.32e-07!10;UBERON:0001950!4.32e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.92e-39,73;UBERON:0001016,5.49e-38,75;UBERON:0000073,6.29e-35,54;UBERON:0001049,3.29e-32,52;UBERON:0005068,3.29e-32,52;UBERON:0006241,3.29e-32,52;UBERON:0007135,3.29e-32,52;UBERON:0002346,4.62e-28,64;UBERON:0003075,4.62e-28,64;UBERON:0007284,4.62e-28,64;UBERON:0004121,5.48e-28,95;UBERON:0000924,5.48e-28,95;UBERON:0006601,5.48e-28,95;UBERON:0000955,6.87e-27,47;UBERON:0006238,6.87e-27,47;UBERON:0002616,8.71e-26,46;UBERON:0010371,2.45e-24,73;UBERON:0003080,1.80e-22,40;UBERON:0002780,3.69e-21,39;UBERON:0001890,3.69e-21,39;UBERON:0006240,3.69e-21,39;UBERON:0003056,7.48e-18,49;UBERON:0010314,9.03e-18,92;UBERON:0002020,1.47e-17,34;UBERON:0003528,5.74e-13,29;UBERON:0002791,5.74e-13,29;UBERON:0001893,5.74e-13,29;UBERON:0002021,9.74e-13,10;UBERON:0000411,9.74e-13,10;UBERON:0001950,9.74e-13,10;UBERON:0003076,4.45e-10,12;UBERON:0003057,4.45e-10,12;UBERON:0000025,9.88e-10,114;UBERON:0001894,1.16e-09,10;UBERON:0006222,1.16e-09,10;UBERON:0004111,5.29e-09,122;UBERON:0002619,5.50e-08,17;UBERON:0002420,1.30e-07,8;UBERON:0007245,1.30e-07,8;UBERON:0010009,1.30e-07,8;UBERON:0010011,1.30e-07,8;UBERON:0000454,1.30e-07,8;UBERON:0002240,1.51e-07,6;UBERON:0005174,1.51e-07,6;UBERON:0001137,1.51e-07,6;UBERON:0000956,2.45e-07,21;UBERON:0001869,2.45e-07,21;UBERON:0000203,2.45e-07,21;UBERON:0002950,4.66e-07,4;UBERON:0001891,4.66e-07,4;UBERON:0009616,4.66e-07,4;UBERON:0010286,4.66e-07,4;UBERON:0000007,5.58e-07,8;UBERON:0003296,5.58e-07,8;UBERON:0010133,5.58e-07,8;UBERON:0011216,6.32e-07,194
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0.258246646883153,0.703943610758334,0,0,0.398860794976682,0.684802919724823,1.31130603628496,0,0,0,1.10411757875383,0.548457734422955,1.27316895539409,0.850432901510698,1.78723712161594,2.08959831311148,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,1.25896817975577,0.912392380975631,0.183546752161682,0,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0.503347818173209,0.725362142011344,0.672187598284928,0,0,0,1.21389876515759,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0,1.99955689082663,2.65042249141936,0.367472397644862,0,0,3.30347642998166,3.83062014255563,5.37622866396852,1.05509030184155,1.00636407962651,1.56274011167028,3.35019598801657,5.6276261003168,7.18151764551008,1.47314292736834,2.13557521198654,1.4911955666024,0.227178579999552,0,0,0,0,0,0,0,0.140444420131752,0.852151612890289,0.519572009205738,0,0.704217098883403,1.28326477414318,0,0,0,0,0,0,0.517875767294343,1.63286352971307,0.173485326766136,0.304465478312141,0.691846491768175,0.452167921657868,0.352766121407114,0.628332956648377,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,3.80615036115011,3.56059401582874,0,0.359445373517761,0.599902730993408,0,5.99162557619291,5.03250663100489,0.753926112677186,5.04090528557602,3.83573185995496,6.2336413367868,5.84068547043927,0.101839363850316,0.373220911830279,1.26361379216837,0.210441855886474,0.650602214813519,0.459804208866946,0.180062129805349,0.452114453507145,0.340182495756639,0.384341160854549,0.374806898238915,1.03481348295606,0.215567992932842,0.756424320671277,0,0.43839146485515,0.278047249225598,0.348252166522167,0,0.995171334092466,0,0,0.284163499395593,0.621377317606506,0.703578179943289,0.720248245844059,0.23674473558521,0.196764231747404,0.617068451549513,0.465067889500816,0,0,0.329119699826961,0.164167464079095,0,0,0,0.134206418760372,3.57492912559016,0.411618449517138,0,0,0,0,0.128867461322093,0,0,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.114248512609729,1.1270773567308,0,0,0.280543279561274,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0,0,0.449724224769707,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.37898282354097,0,0,0,0.167506257441816,0,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,3.85321415970701,4.80567915028033,0,0,0.315508219416257,1.56175497718655,1.07711698866399,1.43381278771531,1.33679204449436,0.283076530788832,0.809621403349789,1.16902343164525,0.395287777946524,2.57057053137446,0.567760340833074,0.178065603667255,0.325773918707152,0.989820737835213,0,0.728341908464944,0.906970670894253,0.377210159511796,0.295301892880773,0.307435147943927,0.775284879504663,0.363533729477506,0.356497378384721,0.632073515871632,1.05418608574999,0,3.40439605753788,1.26042765821917,1.16422815404479,2.14337035031592,2.12808280370728,1.78368817602071,0.822745103010605,2.13125464380219,0,0,0.661585194164886,0,0,0.120625849856312,0,0,0,3.33765543618917,0.683483523191411,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,1.69978429993855,0.559805809294632,1.38199973804424,0,0.158167996790568,0.406638934253697,0.324016022465404,0,0.218362563746178,0,0.165306911450672,0,0,0.621339313086926,1.12738587736838,0.149516546043979,0.330916980914195,0.583353565032143,0.516639293910924,0.675824501963113,0.58678619322877,1.3020438484395,4.50895181030557,2.17425708743405,1.72818003754719,0.632022241256357,0.202725215290164,0.102710957164827,0,0.358053391334963,0,0.360586348559907,0.147689527174577,0.201932899896295,0.15241361331,0.302478555410522,0.194915761479505,0.769694733122636,0,0,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,0.501572104035363,2.82375921308533,2.76195141904306,1.14579102687879,3.43706364687375,2.74033007908257,3.7769694869485,5.40018000185445,1.35096360967266,4.98456649882625,3.62432218226274,0.207574695168353,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0.222246727801615,1.03017528619447,0.64183841918363,0,0.25347929989024,0.754505365544305,0,0.192075457214608,0.229741875822453,0,0.231768651889711,0.77163688185482,0.412085900803307,0.441596760403192,0,0,0.715308569841963,0.436039249896986,0.470546902076653,0.0846146078916765,0,0.526139422875686,0.543216455383447,0.561142271657738,0.355905054372522,0.394017929502254,0.409231043169689,0.464810523557898,0.385813221962283,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0
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|short_description=p3@Rragb
|short_description=p3@Rragb
}}
}}

Revision as of 01:51, 15 November 2012

Short description:p3@Rragb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rragb_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 87bp_to_ENSMUST00000144175_5end
EntrezGene:Rragb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rragb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B25.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A34.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D94.51
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.26e-1433
neuronal stem cell2.26e-1433
neuroblast2.26e-1433
electrically signaling cell2.26e-1433
CNS neuron (sensu Vertebrata)1.67e-1223
neuroblast (sensu Vertebrata)1.67e-1223
electrically responsive cell2.70e-1239
electrically active cell2.70e-1239
neural cell1.48e-0943
ectodermal cell3.35e-0944
neurectodermal cell3.35e-0944

Uber anatomy
Ontology termp-valuen
central nervous system1.92e-3973
nervous system5.49e-3875
regional part of nervous system6.29e-3554
neural tube3.29e-3252
neural rod3.29e-3252
future spinal cord3.29e-3252
neural keel3.29e-3252
neurectoderm4.62e-2864
neural plate4.62e-2864
presumptive neural plate4.62e-2864
ectoderm-derived structure5.48e-2895
ectoderm5.48e-2895
presumptive ectoderm5.48e-2895
brain6.87e-2747
future brain6.87e-2747
regional part of brain8.71e-2646
ecto-epithelium2.45e-2473
anterior neural tube1.80e-2240
regional part of forebrain3.69e-2139
forebrain3.69e-2139
future forebrain3.69e-2139
pre-chordal neural plate7.48e-1849
structure with developmental contribution from neural crest9.03e-1892
gray matter1.47e-1734
brain grey matter5.74e-1329
regional part of telencephalon5.74e-1329
telencephalon5.74e-1329
occipital lobe9.74e-1310
visual cortex9.74e-1310
neocortex9.74e-1310
posterior neural tube4.45e-1012
chordal neural plate4.45e-1012
tube9.88e-10114
diencephalon1.16e-0910
future diencephalon1.16e-0910
anatomical conduit5.29e-09122
regional part of cerebral cortex5.50e-0817
basal ganglion1.30e-078
nuclear complex of neuraxis1.30e-078
aggregate regional part of brain1.30e-078
collection of basal ganglia1.30e-078
cerebral subcortex1.30e-078
spinal cord1.51e-076
dorsal region element1.51e-076
dorsum1.51e-076
cerebral cortex2.45e-0721
cerebral hemisphere2.45e-0721
pallium2.45e-0721
regional part of midbrain4.66e-074
midbrain4.66e-074
presumptive midbrain4.66e-074
midbrain neural tube4.66e-074
pituitary gland5.58e-078
gland of diencephalon5.58e-078
neuroendocrine gland5.58e-078
organ system subdivision6.32e-07194







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