FFCP PHASE1:Hg19::chr10:133109947..133109995,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=256536|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23533|TSSclassifier=S|UniProt=Q5VWI1|association_with_transcript=0bp_to_ENST00000368642,NM_174937,uc001lkp.2_5end|description=CAGE_peak_1_at_TCERG1L_5end|id=chr10:133109947..133109995,-|ontology_enrichment_celltype=CL:0000148!5.52e-10!10;CL:0000541!5.52e-10!10;CL:0000147!3.01e-09!14;CL:0002322!6.57e-07!5|ontology_enrichment_celltype_v019=CL:0000148;3.92e-14;10!CL:0002322;3.46e-11;5!CL:0000147;1.16e-09;14!CL:0002567;5.24e-08;3!CL:0002321;8.05e-07;15|ontology_enrichment_celltype_v019_2=CL:0000148,6.78e-14,10;CL:0000541,6.78e-14,10;CL:0002322,3.76e-11,5;CL:0000147,1.68e-09,14;CL:0002567,6.83e-08,3|ontology_enrichment_development_v019=UBERON:0006601;5.11e-11;82!UBERON:0006241;1.16e-07;3!UBERON:0003057;1.16e-07;3!UBERON:0009117;1.40e-07;10!UBERON:0005564;1.40e-07;10!UBERON:0003056;1.81e-07;3|ontology_enrichment_disease=DOID:3095!7.62e-09!22;DOID:2994!7.62e-09!22|ontology_enrichment_disease_v019=DOID:3095;3.21e-09;22!DOID:2994;3.21e-09;22!DOID:171;6.27e-09;10|ontology_enrichment_disease_v019_2=DOID:3095,2.74e-09,22;DOID:2994,2.74e-09,22;DOID:171,6.20e-09,10|ontology_enrichment_uberon=UBERON:0000073!1.56e-36!94;UBERON:0001016!1.56e-36!94;UBERON:0005743!8.24e-36!86;UBERON:0002346!1.90e-35!90;UBERON:0001017!2.70e-35!82;UBERON:0001049!7.82e-35!57;UBERON:0005068!7.82e-35!57;UBERON:0006241!7.82e-35!57;UBERON:0007135!7.82e-35!57;UBERON:0003075!3.52e-31!86;UBERON:0007284!3.52e-31!86;UBERON:0002616!3.65e-29!59;UBERON:0000955!1.97e-28!69;UBERON:0006238!1.97e-28!69;UBERON:0000924!5.90e-28!173;UBERON:0006601!5.90e-28!173;UBERON:0002780!3.42e-25!41;UBERON:0001890!3.42e-25!41;UBERON:0006240!3.42e-25!41;UBERON:0007023!7.91e-25!115;UBERON:0004121!1.08e-24!169;UBERON:0003080!2.46e-24!42;UBERON:0002619!5.23e-24!22;UBERON:0003056!3.13e-23!61;UBERON:0000956!3.15e-22!25;UBERON:0000203!3.15e-22!25;UBERON:0001950!4.08e-22!20;UBERON:0001869!4.74e-21!32;UBERON:0002020!6.49e-21!34;UBERON:0003528!6.49e-21!34;UBERON:0001893!6.92e-21!34;UBERON:0002791!9.18e-20!33;UBERON:0000153!1.38e-19!129;UBERON:0007811!1.38e-19!129;UBERON:0000033!8.90e-18!123;UBERON:0003076!1.41e-11!15;UBERON:0003057!1.41e-11!15;UBERON:0001871!4.68e-10!7;UBERON:0004732!2.66e-09!13;UBERON:0000200!8.49e-09!6;UBERON:0004733!2.18e-08!12;UBERON:0002028!2.18e-08!12;UBERON:0007277!2.18e-08!12;UBERON:0001872!5.79e-07!5;UBERON:0000349!6.91e-07!5|ontology_enrichment_uberon_v019=UBERON:0002619;3.06e-29;22!UBERON:0001950;4.57e-29;20!UBERON:0000956;2.83e-25;25!UBERON:0000203;2.83e-25;25!UBERON:0001869;5.09e-21;32!UBERON:0003528;5.70e-21;34!UBERON:0002020;5.70e-21;34!UBERON:0002791;5.62e-19;32!UBERON:0001893;1.79e-18;34!UBERON:0002780;6.98e-17;41!UBERON:0001890;6.98e-17;41!UBERON:0000073;2.12e-16;53!UBERON:0002616;2.12e-16;53!UBERON:0000922;2.70e-15;49!UBERON:0000200;1.41e-14;6!UBERON:0001016;2.43e-14;83!UBERON:0001017;1.58e-13;75!UBERON:0000955;2.35e-13;68!UBERON:0001871;1.26e-11;6!UBERON:0002346;9.87e-11;4!UBERON:0000923;9.87e-11;4!UBERON:0010316;9.87e-11;4!UBERON:0005291;9.87e-11;4!UBERON:0002050;1.46e-08;5!UBERON:0005423;1.46e-08;5!UBERON:0001870;2.36e-08;3!UBERON:0001872;8.12e-08;5!UBERON:0002240;1.16e-07;3!UBERON:0005174;1.16e-07;3!UBERON:0001137;1.16e-07;3!UBERON:0000349;1.51e-07;5!UBERON:0004732;3.16e-07;13!UBERON:0000473;9.27e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.19e-33,89;UBERON:0001049,2.48e-33,56;UBERON:0005068,2.48e-33,56;UBERON:0006241,2.48e-33,56;UBERON:0007135,2.48e-33,56;UBERON:0002346,1.93e-32,86;UBERON:0001017,3.30e-32,81;UBERON:0002619,3.01e-29,22;UBERON:0001950,5.56e-29,20;UBERON:0000073,1.73e-28,53;UBERON:0002616,1.73e-28,53;UBERON:0000955,2.38e-27,68;UBERON:0006238,2.38e-27,68;UBERON:0003075,1.69e-26,82;UBERON:0007284,1.69e-26,82;UBERON:0000956,2.79e-25,25;UBERON:0000203,2.79e-25,25;UBERON:0003528,3.25e-24,34;UBERON:0002020,3.25e-24,34;UBERON:0002780,7.33e-24,41;UBERON:0001890,7.33e-24,41;UBERON:0003080,7.33e-24,41;UBERON:0006240,7.33e-24,41;UBERON:0001869,7.64e-24,32;UBERON:0004121,4.08e-23,171;UBERON:0000924,4.08e-23,171;UBERON:0006601,4.08e-23,171;UBERON:0001893,3.73e-22,34;UBERON:0010371,7.93e-22,104;UBERON:0002791,3.22e-21,32;UBERON:0003056,2.28e-20,61;UBERON:0007023,6.49e-18,114;UBERON:0010314,2.48e-17,132;UBERON:0000200,1.60e-14,6;UBERON:0001871,1.48e-11,6;UBERON:0003076,1.58e-10,15;UBERON:0003057,1.58e-10,15;UBERON:0011216,1.24e-09,223;UBERON:0001870,2.37e-08,3;UBERON:0001872,7.91e-08,5;UBERON:0002240,8.64e-08,3;UBERON:0005174,8.64e-08,3;UBERON:0001137,8.64e-08,3;UBERON:0000349,1.04e-07,5;UBERON:0004732,2.95e-07,13;UBERON:0000473,8.69e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.572471974262113,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0.473447805734733,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=256536 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23533 | |||
|TSSclassifier=S | |||
|UniProt=Q5VWI1 | |||
|association_with_transcript=0bp_to_ENST00000368642,NM_174937,uc001lkp.2_5end | |||
|description=CAGE_peak_1_at_TCERG1L_5end | |||
|id=chr10:133109947..133109995,- | |||
|ontology_enrichment_celltype=CL:0000148!5.52e-10!10;CL:0000541!5.52e-10!10;CL:0000147!3.01e-09!14;CL:0002322!6.57e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.92e-14;10!CL:0002322;3.46e-11;5!CL:0000147;1.16e-09;14!CL:0002567;5.24e-08;3!CL:0002321;8.05e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.78e-14,10;CL:0000541,6.78e-14,10;CL:0002322,3.76e-11,5;CL:0000147,1.68e-09,14;CL:0002567,6.83e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.11e-11;82!UBERON:0006241;1.16e-07;3!UBERON:0003057;1.16e-07;3!UBERON:0009117;1.40e-07;10!UBERON:0005564;1.40e-07;10!UBERON:0003056;1.81e-07;3 | |||
|ontology_enrichment_disease=DOID:3095!7.62e-09!22;DOID:2994!7.62e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.21e-09;22!DOID:2994;3.21e-09;22!DOID:171;6.27e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.74e-09,22;DOID:2994,2.74e-09,22;DOID:171,6.20e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.56e-36!94;UBERON:0001016!1.56e-36!94;UBERON:0005743!8.24e-36!86;UBERON:0002346!1.90e-35!90;UBERON:0001017!2.70e-35!82;UBERON:0001049!7.82e-35!57;UBERON:0005068!7.82e-35!57;UBERON:0006241!7.82e-35!57;UBERON:0007135!7.82e-35!57;UBERON:0003075!3.52e-31!86;UBERON:0007284!3.52e-31!86;UBERON:0002616!3.65e-29!59;UBERON:0000955!1.97e-28!69;UBERON:0006238!1.97e-28!69;UBERON:0000924!5.90e-28!173;UBERON:0006601!5.90e-28!173;UBERON:0002780!3.42e-25!41;UBERON:0001890!3.42e-25!41;UBERON:0006240!3.42e-25!41;UBERON:0007023!7.91e-25!115;UBERON:0004121!1.08e-24!169;UBERON:0003080!2.46e-24!42;UBERON:0002619!5.23e-24!22;UBERON:0003056!3.13e-23!61;UBERON:0000956!3.15e-22!25;UBERON:0000203!3.15e-22!25;UBERON:0001950!4.08e-22!20;UBERON:0001869!4.74e-21!32;UBERON:0002020!6.49e-21!34;UBERON:0003528!6.49e-21!34;UBERON:0001893!6.92e-21!34;UBERON:0002791!9.18e-20!33;UBERON:0000153!1.38e-19!129;UBERON:0007811!1.38e-19!129;UBERON:0000033!8.90e-18!123;UBERON:0003076!1.41e-11!15;UBERON:0003057!1.41e-11!15;UBERON:0001871!4.68e-10!7;UBERON:0004732!2.66e-09!13;UBERON:0000200!8.49e-09!6;UBERON:0004733!2.18e-08!12;UBERON:0002028!2.18e-08!12;UBERON:0007277!2.18e-08!12;UBERON:0001872!5.79e-07!5;UBERON:0000349!6.91e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.06e-29;22!UBERON:0001950;4.57e-29;20!UBERON:0000956;2.83e-25;25!UBERON:0000203;2.83e-25;25!UBERON:0001869;5.09e-21;32!UBERON:0003528;5.70e-21;34!UBERON:0002020;5.70e-21;34!UBERON:0002791;5.62e-19;32!UBERON:0001893;1.79e-18;34!UBERON:0002780;6.98e-17;41!UBERON:0001890;6.98e-17;41!UBERON:0000073;2.12e-16;53!UBERON:0002616;2.12e-16;53!UBERON:0000922;2.70e-15;49!UBERON:0000200;1.41e-14;6!UBERON:0001016;2.43e-14;83!UBERON:0001017;1.58e-13;75!UBERON:0000955;2.35e-13;68!UBERON:0001871;1.26e-11;6!UBERON:0002346;9.87e-11;4!UBERON:0000923;9.87e-11;4!UBERON:0010316;9.87e-11;4!UBERON:0005291;9.87e-11;4!UBERON:0002050;1.46e-08;5!UBERON:0005423;1.46e-08;5!UBERON:0001870;2.36e-08;3!UBERON:0001872;8.12e-08;5!UBERON:0002240;1.16e-07;3!UBERON:0005174;1.16e-07;3!UBERON:0001137;1.16e-07;3!UBERON:0000349;1.51e-07;5!UBERON:0004732;3.16e-07;13!UBERON:0000473;9.27e-07;8 | |||
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|short_description=p1@TCERG1L | |||
}} |
Revision as of 12:24, 10 September 2013
Short description: | p1@TCERG1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TCERG1L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368642, NM_174937, uc001lkp.2_5end |
EntrezGene: | TCERG1L |
HGNC: | 23533 |
UniProt: | Q5VWI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.78e-14 | 10 |
melanoblast | 6.78e-14 | 10 |
embryonic stem cell | 3.76e-11 | 5 |
pigment cell | 1.68e-09 | 14 |
light melanocyte | 6.83e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.74e-09 | 22 |
germ cell cancer | 2.74e-09 | 22 |
neuroectodermal tumor | 6.20e-09 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.