FFCP PHASE1:Hg19::chr12:45269871..45269882,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4753|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7751|TSSclassifier=S|UniProt=F8VRQ0|association_with_transcript=-72bp_to_ENST00000548826_5end|coexpression_cluster_id=C1015|description=CAGE_peak_5_at_NELL2_5end|id=chr12:45269871..45269882,-|ontology_enrichment_celltype=CL:0000791!3.52e-14!18;CL:0000789!3.52e-14!18;CL:0002420!3.52e-14!18;CL:0002419!3.52e-14!18;CL:0000790!3.52e-14!18;CL:0000625!1.22e-13!11;CL:0000084!5.78e-09!25;CL:0000827!5.78e-09!25|ontology_enrichment_celltype_v019=CL:0000791;2.29e-15;18!CL:0000789;2.29e-15;18!CL:0002419;2.29e-15;18!CL:0000625;4.31e-15;11!CL:0000084;2.74e-10;25!CL:0000540;1.10e-08;6!CL:0000404;1.10e-08;6|ontology_enrichment_celltype_v019_2=CL:0000791,2.31e-15,18;CL:0000789,2.31e-15,18;CL:0002420,2.31e-15,18;CL:0002419,2.31e-15,18;CL:0000790,2.31e-15,18;CL:0000625,5.19e-15,11;CL:0000084,2.75e-10,25;CL:0000827,2.75e-10,25;CL:0000047,3.80e-09,8;CL:0000540,1.20e-08,6;CL:0000031,1.20e-08,6;CL:0000404,1.20e-08,6|ontology_enrichment_development_v019=UBERON:0006601;1.28e-15;82!CL:0000790;2.29e-15;18!CL:0000031;1.10e-08;6!UBERON:0006215;9.94e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.01e-47!94;UBERON:0001016!1.01e-47!94;UBERON:0005743!3.10e-47!86;UBERON:0001017!1.02e-46!82;UBERON:0001049!2.49e-46!57;UBERON:0005068!2.49e-46!57;UBERON:0006241!2.49e-46!57;UBERON:0007135!2.49e-46!57;UBERON:0002346!3.75e-41!90;UBERON:0003075!9.08e-39!86;UBERON:0007284!9.08e-39!86;UBERON:0002616!1.24e-38!59;UBERON:0002780!2.51e-38!41;UBERON:0001890!2.51e-38!41;UBERON:0006240!2.51e-38!41;UBERON:0000955!1.59e-37!69;UBERON:0006238!1.59e-37!69;UBERON:0003080!4.11e-37!42;UBERON:0007023!8.34e-37!115;UBERON:0003056!2.56e-33!61;UBERON:0001893!4.63e-31!34;UBERON:0002020!1.41e-30!34;UBERON:0003528!1.41e-30!34;UBERON:0002791!1.06e-29!33;UBERON:0001869!2.57e-29!32;UBERON:0002619!3.65e-28!22;UBERON:0000924!1.81e-26!173;UBERON:0006601!1.81e-26!173;UBERON:0001950!1.18e-25!20;UBERON:0000153!3.75e-25!129;UBERON:0007811!3.75e-25!129;UBERON:0004121!1.51e-24!169;UBERON:0000033!3.93e-24!123;UBERON:0000956!5.87e-24!25;UBERON:0000203!5.87e-24!25;UBERON:0003076!2.90e-10!15;UBERON:0003057!2.90e-10!15;UBERON:0000200!2.65e-09!6;UBERON:0001871!8.83e-09!7;UBERON:0001894!1.25e-08!7;UBERON:0006222!1.25e-08!7;UBERON:0002420!1.52e-08!9;UBERON:0007245!1.52e-08!9;UBERON:0010009!1.52e-08!9;UBERON:0010011!1.52e-08!9;UBERON:0000454!1.52e-08!9;UBERON:0001872!3.85e-08!5;UBERON:0002021!4.57e-08!5;UBERON:0002308!4.71e-08!9;UBERON:0000125!4.71e-08!9;UBERON:0004733!6.90e-08!12;UBERON:0002028!6.90e-08!12;UBERON:0007277!6.90e-08!12;UBERON:0000349!8.26e-08!5;UBERON:0002298!2.91e-07!8;UBERON:0004732!4.08e-07!13|ontology_enrichment_uberon_v019=UBERON:0002619;7.18e-47;22!UBERON:0001950;1.13e-42;20!UBERON:0000956;1.13e-40;25!UBERON:0000203;1.13e-40;25!UBERON:0001869;3.58e-39;32!UBERON:0001893;6.80e-39;34!UBERON:0002791;3.22e-36;32!UBERON:0003528;4.38e-36;34!UBERON:0002020;4.38e-36;34!UBERON:0000073;3.40e-34;53!UBERON:0002616;3.40e-34;53!UBERON:0002780;3.48e-34;41!UBERON:0001890;3.48e-34;41!UBERON:0000955;9.57e-24;68!UBERON:0001017;8.75e-22;75!UBERON:0001016;1.58e-18;83!UBERON:0000200;1.04e-14;6!UBERON:0001872;1.01e-12;5!UBERON:0002021;1.78e-12;5!UBERON:0001871;3.44e-12;6!UBERON:0000349;6.69e-12;5!UBERON:0004733;7.30e-11;12!UBERON:0002028;7.30e-11;12!UBERON:0004732;6.45e-10;13!UBERON:0002298;4.27e-09;6!UBERON:0007023;6.96e-09;114!UBERON:0011216;2.77e-08;132!UBERON:0001870;3.95e-08;3!UBERON:0001894;1.43e-07;7!UBERON:0001896;2.66e-07;3!UBERON:0005290;2.66e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.28e-61,89;UBERON:0001017,1.13e-60,81;UBERON:0000073,1.12e-59,53;UBERON:0002616,1.12e-59,53;UBERON:0001049,6.63e-56,56;UBERON:0005068,6.63e-56,56;UBERON:0006241,6.63e-56,56;UBERON:0007135,6.63e-56,56;UBERON:0000955,3.34e-54,68;UBERON:0006238,3.34e-54,68;UBERON:0002780,3.01e-50,41;UBERON:0001890,3.01e-50,41;UBERON:0003080,3.01e-50,41;UBERON:0006240,3.01e-50,41;UBERON:0002619,1.01e-46,22;UBERON:0001893,6.24e-44,34;UBERON:0001869,7.83e-44,32;UBERON:0001950,1.75e-42,20;UBERON:0000956,1.52e-40,25;UBERON:0000203,1.52e-40,25;UBERON:0003528,2.07e-40,34;UBERON:0002020,2.07e-40,34;UBERON:0002791,4.21e-40,32;UBERON:0003075,8.29e-39,82;UBERON:0007284,8.29e-39,82;UBERON:0002346,9.43e-39,86;UBERON:0003056,2.27e-35,61;UBERON:0004121,1.46e-30,171;UBERON:0000924,1.46e-30,171;UBERON:0006601,1.46e-30,171;UBERON:0010371,1.16e-29,104;UBERON:0011216,9.33e-26,223;UBERON:0007023,3.90e-25,114;UBERON:0010314,5.01e-21,132;UBERON:0000200,1.47e-14,6;UBERON:0001872,1.31e-12,5;UBERON:0002021,1.74e-12,5;UBERON:0001871,4.26e-12,6;UBERON:0000349,4.69e-12,5;UBERON:0000025,3.80e-11,192;UBERON:0004733,1.36e-10,12;UBERON:0002028,1.36e-10,12;UBERON:0007277,1.36e-10,12;UBERON:0004732,1.14e-09,13;UBERON:0002298,6.67e-09,6;UBERON:0003076,3.38e-08,15;UBERON:0003057,3.38e-08,15;UBERON:0001870,3.52e-08,3;UBERON:0001894,1.05e-07,7;UBERON:0006222,1.05e-07,7;UBERON:0004111,1.82e-07,240;UBERON:0001896,3.81e-07,3;UBERON:0005290,3.81e-07,3;UBERON:0010096,3.81e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0.401088894940283,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75393678159366,1.57204305099666,0.822405995998037,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,2.81744470007915,1.60524496853828,0,0,2.29932296161153,0.68725489096526,0.506039384039006,1.27426165729639,1.30216690771284,3.8018081777935,1.05402583354441,1.66382594500744,2.49861453104692,0.947109008176067,0.821127996921047,5.24177532384304,1.06976078313403,3.62061009706997,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,1.45782745153634,0.929551542956147,0.829288440122964,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,1.27523445472584,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0.77005821767849,0,2.60279707715243,2.31986643833309,1.34013012267479,1.27587750330633,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,2.2507106625682,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,3.87733098438087,5.00947730073997,3.99227596002388,0,0,0,0,0,0,0.344743373241465,1.74962768029953,2.60437492399938,2.65722415744152,0.482385754501632,3.05163472634166,3.20679853800551,1.18219047581419,3.29078095730959,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,1.01101699471016,0,1.87411556580271,0.182454789215666,0,0,0,0,3.0607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48578814858586,0,0,3.98858014522036,0,0,0,0,0,7.67395194311635,0.171594997861965,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,8.74752658790234,1.49823746722733,0,1.2378549293751,1.66176135211674,0,0,4.00947073942963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.387848869084652,1.45455861916959,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38154252376101,4.43034089983493,4.6369980662746,2.3786276834235,2.29363678276028,1.44207766997908,2.04918129706565,1.66018361923477,0,0,0,0,0.468334905806882,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4531480251986,1.40172254815686,15.254796360022,0.109209638192014,0.678930119816101,0.850299680406731,9.29518231942516,0,0,0,0.80057074828547,0,0,3.91798273088403,4.25089728976755,2.23487402680012,2.66651273512982,6.80593579798639,3.80364888553198,2.74508597574147,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,4.72763092328763,3.12431239445539,3.30698874401895,3.42445375047097,4.92277328116398,0,0,0,0,0.535701835878287,2.01770233331294,1.82089681270989,2.50428410486427,0,0,0,2.17503145525861,3.02554758389106,0,0,2.98273752831953,2.19961825882403,0,2.73947616152849,0,0,3.28792103212619,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,6.31636551347685,0,2.73516208788408,10.7298777937012,4.28768015307174,0,0.0771741581079447,0.437119121007915,0,0,0,0.392616934229891,0.594092800654172,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0,0.286679166302903,0.473314686579554,4.01149792126397,8.29066311646717,0,0,0,0,0.126166424835079,0,0,0,0.26721740526556,0,0,0.151557396436479,0,1.65833887891756,0.20686599172379,0.213233981900981,0.476128862927481,0,0,0,0.25458863311266,0,0,0,0.26940821205835,0.143444410785353,0,0,0,0,0,0,0,1.22068853494722,0,0.201273793591026,0|short_description=p5@NELL2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4753 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7751 | |||
|TSSclassifier=S | |||
|UniProt=F8VRQ0 | |||
|association_with_transcript=-72bp_to_ENST00000548826_5end | |||
|coexpression_cluster_id=C1015 | |||
|description=CAGE_peak_5_at_NELL2_5end | |||
|id=chr12:45269871..45269882,- | |||
|ontology_enrichment_celltype=CL:0000791!3.52e-14!18;CL:0000789!3.52e-14!18;CL:0002420!3.52e-14!18;CL:0002419!3.52e-14!18;CL:0000790!3.52e-14!18;CL:0000625!1.22e-13!11;CL:0000084!5.78e-09!25;CL:0000827!5.78e-09!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.29e-15;18!CL:0000789;2.29e-15;18!CL:0002419;2.29e-15;18!CL:0000625;4.31e-15;11!CL:0000084;2.74e-10;25!CL:0000540;1.10e-08;6!CL:0000404;1.10e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.31e-15,18;CL:0000789,2.31e-15,18;CL:0002420,2.31e-15,18;CL:0002419,2.31e-15,18;CL:0000790,2.31e-15,18;CL:0000625,5.19e-15,11;CL:0000084,2.75e-10,25;CL:0000827,2.75e-10,25;CL:0000047,3.80e-09,8;CL:0000540,1.20e-08,6;CL:0000031,1.20e-08,6;CL:0000404,1.20e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.28e-15;82!CL:0000790;2.29e-15;18!CL:0000031;1.10e-08;6!UBERON:0006215;9.94e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.01e-47!94;UBERON:0001016!1.01e-47!94;UBERON:0005743!3.10e-47!86;UBERON:0001017!1.02e-46!82;UBERON:0001049!2.49e-46!57;UBERON:0005068!2.49e-46!57;UBERON:0006241!2.49e-46!57;UBERON:0007135!2.49e-46!57;UBERON:0002346!3.75e-41!90;UBERON:0003075!9.08e-39!86;UBERON:0007284!9.08e-39!86;UBERON:0002616!1.24e-38!59;UBERON:0002780!2.51e-38!41;UBERON:0001890!2.51e-38!41;UBERON:0006240!2.51e-38!41;UBERON:0000955!1.59e-37!69;UBERON:0006238!1.59e-37!69;UBERON:0003080!4.11e-37!42;UBERON:0007023!8.34e-37!115;UBERON:0003056!2.56e-33!61;UBERON:0001893!4.63e-31!34;UBERON:0002020!1.41e-30!34;UBERON:0003528!1.41e-30!34;UBERON:0002791!1.06e-29!33;UBERON:0001869!2.57e-29!32;UBERON:0002619!3.65e-28!22;UBERON:0000924!1.81e-26!173;UBERON:0006601!1.81e-26!173;UBERON:0001950!1.18e-25!20;UBERON:0000153!3.75e-25!129;UBERON:0007811!3.75e-25!129;UBERON:0004121!1.51e-24!169;UBERON:0000033!3.93e-24!123;UBERON:0000956!5.87e-24!25;UBERON:0000203!5.87e-24!25;UBERON:0003076!2.90e-10!15;UBERON:0003057!2.90e-10!15;UBERON:0000200!2.65e-09!6;UBERON:0001871!8.83e-09!7;UBERON:0001894!1.25e-08!7;UBERON:0006222!1.25e-08!7;UBERON:0002420!1.52e-08!9;UBERON:0007245!1.52e-08!9;UBERON:0010009!1.52e-08!9;UBERON:0010011!1.52e-08!9;UBERON:0000454!1.52e-08!9;UBERON:0001872!3.85e-08!5;UBERON:0002021!4.57e-08!5;UBERON:0002308!4.71e-08!9;UBERON:0000125!4.71e-08!9;UBERON:0004733!6.90e-08!12;UBERON:0002028!6.90e-08!12;UBERON:0007277!6.90e-08!12;UBERON:0000349!8.26e-08!5;UBERON:0002298!2.91e-07!8;UBERON:0004732!4.08e-07!13 | |||
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|short_description=p5@NELL2 | |||
}} |
Revision as of 22:40, 10 September 2013
Short description: | p5@NELL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_NELL2_5end |
Coexpression cluster: | C1015_occipital_neuroectodermal_temporal_parietal_duodenum_brain_small |
Association with transcript: | -72bp_to_ENST00000548826_5end |
EntrezGene: | NELL2 |
HGNC: | 7751 |
UniProt: | F8VRQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.31e-15 | 18 |
alpha-beta T cell | 2.31e-15 | 18 |
immature T cell | 2.31e-15 | 18 |
mature T cell | 2.31e-15 | 18 |
immature alpha-beta T cell | 2.31e-15 | 18 |
CD8-positive, alpha-beta T cell | 5.19e-15 | 11 |
T cell | 2.75e-10 | 25 |
pro-T cell | 2.75e-10 | 25 |
neuronal stem cell | 3.80e-09 | 8 |
neuron | 1.20e-08 | 6 |
neuroblast | 1.20e-08 | 6 |
electrically signaling cell | 1.20e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.