FFCP PHASE1:Hg19::chr13:45010857..45010868,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8848|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16826|TSSclassifier=S|UniProt=|association_with_transcript=110bp_to_uc001uzm.3_5end|description=CAGE_peak_16_at_TSC22D1_5end|id=chr13:45010857..45010868,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000064;2.04e-19;3!CL:0000067;2.04e-19;3!CL:0005012;2.04e-19;3!CL:0002304;2.04e-19;3!CL:0002541;4.23e-09;3!CL:0000075;1.31e-07;27!CL:0002379;3.50e-07;1!CL:0000306;5.67e-07;4!CL:0002222;5.67e-07;4!CL:0002224;5.67e-07;4|ontology_enrichment_celltype_v019_2=CL:0000064,2.40e-19,3;CL:0000067,2.40e-19,3;CL:0005012,2.40e-19,3;CL:0002304,2.40e-19,3;CL:0002541,2.96e-09,3;CL:0000075,1.36e-07,27;CL:0002379,4.60e-07,1;CL:0000306,5.05e-07,4;CL:0002222,5.05e-07,4;CL:0002224,5.05e-07,4|ontology_enrichment_development_v019=UBERON:0010226;3.50e-07;1!UBERON:0003099;3.50e-07;1!UBERON:0003852;3.50e-07;1!UBERON:0005062;9.08e-07;4!UBERON:0007284;9.08e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3620;3.50e-07;1!DOID:3111;3.50e-07;1!DOID:3565;3.50e-07;1!DOID:3603;3.50e-07;1|ontology_enrichment_disease_v019_2=DOID:3620,4.60e-07,1;DOID:3565,4.60e-07,1;DOID:3111,5.84e-07,1;DOID:3603,5.84e-07,1|ontology_enrichment_uberon=UBERON:0007023!7.19e-12!115;UBERON:0000062!4.97e-10!511;UBERON:0000922!2.93e-08!612;UBERON:0000468!3.31e-08!659;UBERON:0000467!3.34e-08!625;UBERON:0000480!4.36e-08!626;UBERON:0002050!7.71e-08!605;UBERON:0005423!7.71e-08!605;UBERON:0000923!1.36e-07!604;UBERON:0005291!1.36e-07!604;UBERON:0006598!1.36e-07!604;UBERON:0002532!1.36e-07!604;UBERON:0001049!1.46e-07!57;UBERON:0005068!1.46e-07!57;UBERON:0006241!1.46e-07!57;UBERON:0007135!1.46e-07!57;UBERON:0001017!2.96e-07!82;UBERON:0000477!3.66e-07!286;UBERON:0000481!5.95e-07!347;UBERON:0005743!9.29e-07!86;UBERON:0000955!9.92e-07!69;UBERON:0006238!9.92e-07!69|ontology_enrichment_uberon_v019=UBERON:0001778;2.04e-19;3!UBERON:0001775;2.04e-19;3!UBERON:0000488;1.07e-14;4!UBERON:0007625;7.14e-14;11!UBERON:0001801;7.57e-11;14!UBERON:0002203;5.87e-10;6!UBERON:0001768;5.87e-10;6!UBERON:0002200;5.87e-10;6!UBERON:0001456;5.93e-10;21!UBERON:0005631;6.51e-10;10!UBERON:0000158;6.51e-10;10!UBERON:0003124;4.23e-09;3!UBERON:0000920;4.23e-09;3!UBERON:0004151;9.37e-09;3!UBERON:0000019;6.39e-08;19!UBERON:0000047;6.39e-08;19!UBERON:0004088;6.39e-08;19!UBERON:0010230;6.39e-08;19!UBERON:0001282;1.02e-07;1!UBERON:0009842;1.02e-07;1!UBERON:0003704;1.02e-07;1!UBERON:0001171;1.02e-07;1!UBERON:0001172;1.02e-07;1!UBERON:0000970;1.64e-07;20!UBERON:0002084;3.50e-07;1!UBERON:0002134;3.50e-07;1!UBERON:0005705;3.50e-07;1!UBERON:0008193;3.50e-07;1!UBERON:0002082;3.50e-07;1!UBERON:0010912;3.50e-07;1!UBERON:0005208;3.50e-07;1!UBERON:0002514;3.50e-07;1!UBERON:0003457;3.50e-07;1!UBERON:0008907;3.50e-07;1!UBERON:0008001;3.50e-07;1!UBERON:0007213;3.50e-07;1!UBERON:0009891;3.50e-07;1!UBERON:0007914;3.50e-07;1!UBERON:0007375;3.50e-07;1!UBERON:0003323;3.50e-07;1!UBERON:0010258;3.50e-07;1!UBERON:0004145;3.50e-07;1!UBERON:0005946;3.50e-07;1!UBERON:0005253;3.50e-07;1!UBERON:0007842;3.50e-07;1!UBERON:0005965;3.50e-07;1!UBERON:0002397;3.50e-07;1!UBERON:0003113;3.50e-07;1!UBERON:0003277;3.50e-07;1!UBERON:0001709;3.50e-07;1!UBERON:0002078;3.50e-07;1!UBERON:0002244;3.50e-07;1!UBERON:0005620;3.50e-07;1!UBERON:0010364;3.50e-07;1!UBERON:0004288;3.50e-07;1!UBERON:0002104;3.87e-07;21!UBERON:0010077;5.67e-07;4!UBERON:0005389;5.67e-07;4!UBERON:0000484;5.67e-07;4!UBERON:0000965;5.67e-07;4!UBERON:0001803;5.67e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.40e-19,3;UBERON:0001775,2.40e-19,3;UBERON:0000488,1.20e-14,4;UBERON:0007625,6.90e-14,11;UBERON:0001801,7.37e-11,14;UBERON:0002203,6.35e-10,6;UBERON:0001768,6.35e-10,6;UBERON:0002200,6.35e-10,6;UBERON:0001456,1.97e-09,22;UBERON:0000920,2.96e-09,3;UBERON:0004151,7.72e-09,3;UBERON:0001282,9.91e-08,1;UBERON:0009842,9.91e-08,1;UBERON:0003704,9.91e-08,1;UBERON:0001171,9.91e-08,1;UBERON:0001172,9.91e-08,1;UBERON:0000019,1.62e-07,20;UBERON:0000047,1.62e-07,20;UBERON:0010312,1.62e-07,20;UBERON:0004088,1.62e-07,20;UBERON:0010230,1.62e-07,20;UBERON:0003072,1.62e-07,20;UBERON:0004128,1.62e-07,20;UBERON:0003071,1.62e-07,20;UBERON:0002134,2.67e-07,1;UBERON:0005208,2.67e-07,1;UBERON:0005946,2.67e-07,1;UBERON:0005965,2.67e-07,1;UBERON:0002078,2.67e-07,1;UBERON:0005631,3.11e-07,14;UBERON:0000158,3.11e-07,14;UBERON:0002084,3.41e-07,1;UBERON:0002082,3.41e-07,1;UBERON:0010226,3.41e-07,1;UBERON:0000970,3.80e-07,21;UBERON:0002104,3.80e-07,21;UBERON:0010077,5.05e-07,4;UBERON:0005389,5.05e-07,4;UBERON:0000484,5.05e-07,4;UBERON:0002546,5.05e-07,4;UBERON:0000965,5.05e-07,4;UBERON:0001803,5.05e-07,4;UBERON:0003073,5.05e-07,4;UBERON:0005426,5.05e-07,4;UBERON:0005705,5.50e-07,1;UBERON:0008193,5.50e-07,1;UBERON:0010912,5.50e-07,1;UBERON:0002514,5.50e-07,1;UBERON:0003457,5.50e-07,1;UBERON:0008907,5.50e-07,1;UBERON:0008001,5.50e-07,1;UBERON:0007213,5.50e-07,1;UBERON:0009891,5.50e-07,1;UBERON:0007914,5.50e-07,1;UBERON:0009292,5.50e-07,1;UBERON:0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8848 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16826 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=110bp_to_uc001uzm.3_5end | |||
|description=CAGE_peak_16_at_TSC22D1_5end | |||
|id=chr13:45010857..45010868,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.04e-19;3!CL:0000067;2.04e-19;3!CL:0005012;2.04e-19;3!CL:0002304;2.04e-19;3!CL:0002541;4.23e-09;3!CL:0000075;1.31e-07;27!CL:0002379;3.50e-07;1!CL:0000306;5.67e-07;4!CL:0002222;5.67e-07;4!CL:0002224;5.67e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.40e-19,3;CL:0000067,2.40e-19,3;CL:0005012,2.40e-19,3;CL:0002304,2.40e-19,3;CL:0002541,2.96e-09,3;CL:0000075,1.36e-07,27;CL:0002379,4.60e-07,1;CL:0000306,5.05e-07,4;CL:0002222,5.05e-07,4;CL:0002224,5.05e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.50e-07;1!UBERON:0003099;3.50e-07;1!UBERON:0003852;3.50e-07;1!UBERON:0005062;9.08e-07;4!UBERON:0007284;9.08e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;3.50e-07;1!DOID:3111;3.50e-07;1!DOID:3565;3.50e-07;1!DOID:3603;3.50e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,4.60e-07,1;DOID:3565,4.60e-07,1;DOID:3111,5.84e-07,1;DOID:3603,5.84e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.19e-12!115;UBERON:0000062!4.97e-10!511;UBERON:0000922!2.93e-08!612;UBERON:0000468!3.31e-08!659;UBERON:0000467!3.34e-08!625;UBERON:0000480!4.36e-08!626;UBERON:0002050!7.71e-08!605;UBERON:0005423!7.71e-08!605;UBERON:0000923!1.36e-07!604;UBERON:0005291!1.36e-07!604;UBERON:0006598!1.36e-07!604;UBERON:0002532!1.36e-07!604;UBERON:0001049!1.46e-07!57;UBERON:0005068!1.46e-07!57;UBERON:0006241!1.46e-07!57;UBERON:0007135!1.46e-07!57;UBERON:0001017!2.96e-07!82;UBERON:0000477!3.66e-07!286;UBERON:0000481!5.95e-07!347;UBERON:0005743!9.29e-07!86;UBERON:0000955!9.92e-07!69;UBERON:0006238!9.92e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;2.04e-19;3!UBERON:0001775;2.04e-19;3!UBERON:0000488;1.07e-14;4!UBERON:0007625;7.14e-14;11!UBERON:0001801;7.57e-11;14!UBERON:0002203;5.87e-10;6!UBERON:0001768;5.87e-10;6!UBERON:0002200;5.87e-10;6!UBERON:0001456;5.93e-10;21!UBERON:0005631;6.51e-10;10!UBERON:0000158;6.51e-10;10!UBERON:0003124;4.23e-09;3!UBERON:0000920;4.23e-09;3!UBERON:0004151;9.37e-09;3!UBERON:0000019;6.39e-08;19!UBERON:0000047;6.39e-08;19!UBERON:0004088;6.39e-08;19!UBERON:0010230;6.39e-08;19!UBERON:0001282;1.02e-07;1!UBERON:0009842;1.02e-07;1!UBERON:0003704;1.02e-07;1!UBERON:0001171;1.02e-07;1!UBERON:0001172;1.02e-07;1!UBERON:0000970;1.64e-07;20!UBERON:0002084;3.50e-07;1!UBERON:0002134;3.50e-07;1!UBERON:0005705;3.50e-07;1!UBERON:0008193;3.50e-07;1!UBERON:0002082;3.50e-07;1!UBERON:0010912;3.50e-07;1!UBERON:0005208;3.50e-07;1!UBERON:0002514;3.50e-07;1!UBERON:0003457;3.50e-07;1!UBERON:0008907;3.50e-07;1!UBERON:0008001;3.50e-07;1!UBERON:0007213;3.50e-07;1!UBERON:0009891;3.50e-07;1!UBERON:0007914;3.50e-07;1!UBERON:0007375;3.50e-07;1!UBERON:0003323;3.50e-07;1!UBERON:0010258;3.50e-07;1!UBERON:0004145;3.50e-07;1!UBERON:0005946;3.50e-07;1!UBERON:0005253;3.50e-07;1!UBERON:0007842;3.50e-07;1!UBERON:0005965;3.50e-07;1!UBERON:0002397;3.50e-07;1!UBERON:0003113;3.50e-07;1!UBERON:0003277;3.50e-07;1!UBERON:0001709;3.50e-07;1!UBERON:0002078;3.50e-07;1!UBERON:0002244;3.50e-07;1!UBERON:0005620;3.50e-07;1!UBERON:0010364;3.50e-07;1!UBERON:0004288;3.50e-07;1!UBERON:0002104;3.87e-07;21!UBERON:0010077;5.67e-07;4!UBERON:0005389;5.67e-07;4!UBERON:0000484;5.67e-07;4!UBERON:0000965;5.67e-07;4!UBERON:0001803;5.67e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.40e-19,3;UBERON:0001775,2.40e-19,3;UBERON:0000488,1.20e-14,4;UBERON:0007625,6.90e-14,11;UBERON:0001801,7.37e-11,14;UBERON:0002203,6.35e-10,6;UBERON:0001768,6.35e-10,6;UBERON:0002200,6.35e-10,6;UBERON:0001456,1.97e-09,22;UBERON:0000920,2.96e-09,3;UBERON:0004151,7.72e-09,3;UBERON:0001282,9.91e-08,1;UBERON:0009842,9.91e-08,1;UBERON:0003704,9.91e-08,1;UBERON:0001171,9.91e-08,1;UBERON:0001172,9.91e-08,1;UBERON:0000019,1.62e-07,20;UBERON:0000047,1.62e-07,20;UBERON:0010312,1.62e-07,20;UBERON:0004088,1.62e-07,20;UBERON:0010230,1.62e-07,20;UBERON:0003072,1.62e-07,20;UBERON:0004128,1.62e-07,20;UBERON:0003071,1.62e-07,20;UBERON:0002134,2.67e-07,1;UBERON:0005208,2.67e-07,1;UBERON:0005946,2.67e-07,1;UBERON:0005965,2.67e-07,1;UBERON:0002078,2.67e-07,1;UBERON:0005631,3.11e-07,14;UBERON:0000158,3.11e-07,14;UBERON:0002084,3.41e-07,1;UBERON:0002082,3.41e-07,1;UBERON:0010226,3.41e-07,1;UBERON:0000970,3.80e-07,21;UBERON:0002104,3.80e-07,21;UBERON:0010077,5.05e-07,4;UBERON:0005389,5.05e-07,4;UBERON:0000484,5.05e-07,4;UBERON:0002546,5.05e-07,4;UBERON:0000965,5.05e-07,4;UBERON:0001803,5.05e-07,4;UBERON:0003073,5.05e-07,4;UBERON:0005426,5.05e-07,4;UBERON:0005705,5.50e-07,1;UBERON:0008193,5.50e-07,1;UBERON:0010912,5.50e-07,1;UBERON:0002514,5.50e-07,1;UBERON:0003457,5.50e-07,1;UBERON:0008907,5.50e-07,1;UBERON:0008001,5.50e-07,1;UBERON:0007213,5.50e-07,1;UBERON:0009891,5.50e-07,1;UBERON:0007914,5.50e-07,1;UBERON:0009292,5.50e-07,1;UBERON:0003099,5.50e-07,1;UBERON:0007375,5.50e-07,1;UBERON:0003323,5.50e-07,1;UBERON:0010258,5.50e-07,1;UBERON:0007842,5.50e-07,1;UBERON:0009494,5.50e-07,1;UBERON:0010042,5.50e-07,1;UBERON:0010045,5.50e-07,1;UBERON:0010259,5.50e-07,1;UBERON:0010359,5.50e-07,1;UBERON:0009526,5.50e-07,1;UBERON:0002397,5.50e-07,1;UBERON:0003113,5.50e-07,1;UBERON:0003277,5.50e-07,1;UBERON:0001709,5.50e-07,1;UBERON:0004066,5.50e-07,1;UBERON:0002244,5.50e-07,1;UBERON:0005620,5.50e-07,1;UBERON:0004362,5.50e-07,1;UBERON:0010364,5.50e-07,1;UBERON:0010046,5.50e-07,1;UBERON:0005868,5.50e-07,1;UBERON:0007238,5.50e-07,1;UBERON:0004288,5.50e-07,1;UBERON:0004068,5.50e-07,1;UBERON:0010334,5.50e-07,1;UBERON:0003852,5.50e-07,1;UBERON:0010253,5.50e-07,1 | |||
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| |||
|short_description=p16@TSC22D1 | |||
}} |
Revision as of 02:19, 11 September 2013
Short description: | p16@TSC22D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_TSC22D1_5end |
Coexpression cluster: | NA |
Association with transcript: | 110bp_to_uc001uzm.3_5end |
EntrezGene: | TSC22D1 |
HGNC: | 16826 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.40e-19 | 3 |
ciliated epithelial cell | 2.40e-19 | 3 |
multi-ciliated epithelial cell | 2.40e-19 | 3 |
non-pigmented ciliary epithelial cell | 2.40e-19 | 3 |
chorionic membrane mesenchymal stem cell | 2.96e-09 | 3 |
columnar/cuboidal epithelial cell | 1.36e-07 | 27 |
meningothelial cell | 4.60e-07 | 1 |
crystallin accumulating cell | 5.05e-07 | 4 |
vertebrate lens cell | 5.05e-07 | 4 |
lens epithelial cell | 5.05e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 4.60e-07 | 1 |
meningioma | 4.60e-07 | 1 |
cystadenocarcinoma | 5.84e-07 | 1 |
mucinous cystadenocarcinoma | 5.84e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.