FFCP PHASE1:Hg19::chr14:29235961..29236008,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2290|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3811|TSSclassifier=S|UniProt=P55316|association_with_transcript=-278bp_to_ENST00000313071,NM_005249,uc001wqe.2_5end|coexpression_cluster_id=C214|description=CAGE_peak_1_at_FOXG1_5end|id=chr14:29235961..29236008,+|ontology_enrichment_celltype=CL:0002319!3.93e-13!25;CL:0000133!1.13e-11!59;CL:0000243!7.81e-11!15;CL:0000125!7.81e-11!15;CL:0000030!7.81e-11!15;CL:0000339!7.81e-11!15;CL:0000095!2.32e-10!17;CL:0000123!2.32e-10!17;CL:0000333!1.70e-08!41;CL:0000221!2.41e-08!71;CL:0000128!9.77e-07!7;CL:0000126!9.77e-07!7;CL:0000127!9.77e-07!7;CL:0002453!9.77e-07!7|ontology_enrichment_celltype_v019=CL:0002319;3.18e-15;25!CL:0000243;3.81e-12;15!CL:0000125;3.81e-12;15!CL:0000095;7.80e-12;17!CL:0000128;7.31e-09;7!CL:0000126;7.31e-09;7!CL:0000127;7.31e-09;7|ontology_enrichment_celltype_v019_2=CL:0002319,2.89e-15,25;CL:0000133,2.07e-13,59;CL:0000243,3.84e-12,15;CL:0000125,3.84e-12,15;CL:0000030,3.84e-12,15;CL:0000339,3.84e-12,15;CL:0000095,7.06e-12,17;CL:0000123,7.06e-12,17;CL:0000221,3.70e-10,72;CL:0000128,6.80e-09,7;CL:0000126,6.80e-09,7;CL:0000127,6.80e-09,7;CL:0002453,6.80e-09,7;CL:0000333,9.59e-09,41|ontology_enrichment_development_v019=CL:0000339;3.81e-12;15!UBERON:0006238;7.22e-09;10!CL:0000133;3.11e-07;59|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!2.27e-31!61;UBERON:0001017!3.60e-31!82;UBERON:0005743!2.06e-30!86;UBERON:0002780!3.22e-29!41;UBERON:0001890!3.22e-29!41;UBERON:0006240!3.22e-29!41;UBERON:0000955!5.71e-29!69;UBERON:0006238!5.71e-29!69;UBERON:0001869!1.69e-28!32;UBERON:0000073!2.69e-28!94;UBERON:0001016!2.69e-28!94;UBERON:0003080!4.11e-28!42;UBERON:0001893!5.86e-28!34;UBERON:0002791!4.74e-27!33;UBERON:0000153!6.45e-27!129;UBERON:0007811!6.45e-27!129;UBERON:0003075!1.89e-26!86;UBERON:0007284!1.89e-26!86;UBERON:0000033!1.52e-25!123;UBERON:0002020!4.59e-25!34;UBERON:0003528!4.59e-25!34;UBERON:0002346!3.67e-24!90;UBERON:0002616!1.03e-22!59;UBERON:0004121!1.05e-22!169;UBERON:0000956!1.08e-22!25;UBERON:0000203!1.08e-22!25;UBERON:0001049!9.15e-22!57;UBERON:0005068!9.15e-22!57;UBERON:0006241!9.15e-22!57;UBERON:0007135!9.15e-22!57;UBERON:0000924!2.11e-21!173;UBERON:0006601!2.11e-21!173;UBERON:0002619!7.27e-20!22;UBERON:0001950!4.26e-18!20;UBERON:0000119!1.64e-11!312;UBERON:0000483!2.26e-11!309;UBERON:0000025!3.13e-11!194;UBERON:0000475!7.59e-11!365;UBERON:0000477!2.54e-08!286;UBERON:0000481!8.40e-08!347;UBERON:0007023!1.52e-07!115;UBERON:0000064!2.58e-07!219;UBERON:0004111!4.04e-07!241;UBERON:0002420!5.91e-07!9;UBERON:0007245!5.91e-07!9;UBERON:0010009!5.91e-07!9;UBERON:0010011!5.91e-07!9;UBERON:0000454!5.91e-07!9;UBERON:0001801!6.15e-07!14;UBERON:0000200!7.51e-07!6|ontology_enrichment_uberon_v019=UBERON:0001869;3.19e-36;32!UBERON:0001893;5.88e-35;34!UBERON:0002791;5.99e-34;32!UBERON:0000956;7.87e-32;25!UBERON:0000203;7.87e-32;25!UBERON:0003528;9.26e-31;34!UBERON:0002020;9.26e-31;34!UBERON:0002780;2.76e-30;41!UBERON:0001890;2.76e-30;41!UBERON:0002619;8.22e-28;22!UBERON:0001950;2.66e-25;20!UBERON:0000073;5.46e-21;53!UBERON:0002616;5.46e-21;53!UBERON:0000955;1.41e-19;68!UBERON:0001017;1.43e-19;75!UBERON:0001016;5.60e-16;83!UBERON:0002420;1.82e-09;9!UBERON:0007245;1.82e-09;9!UBERON:0010009;1.82e-09;9!UBERON:0010011;1.82e-09;9!UBERON:0000454;1.82e-09;9!UBERON:0000200;4.65e-09;6!UBERON:0001872;6.50e-08;5!UBERON:0000349;6.55e-08;5!UBERON:0002021;6.87e-08;5!UBERON:0001871;7.57e-08;6!UBERON:0001801;4.19e-07;14!UBERON:0009663;5.32e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.64e-45,81;UBERON:0000955,1.88e-42,68;UBERON:0006238,1.88e-42,68;UBERON:0001016,3.72e-42,89;UBERON:0002780,6.55e-42,41;UBERON:0001890,6.55e-42,41;UBERON:0003080,6.55e-42,41;UBERON:0006240,6.55e-42,41;UBERON:0003056,1.85e-40,61;UBERON:0001869,4.67e-40,32;UBERON:0001893,1.39e-39,34;UBERON:0002791,3.30e-37,32;UBERON:0000073,6.27e-36,53;UBERON:0002616,6.27e-36,53;UBERON:0003528,2.29e-34,34;UBERON:0002020,2.29e-34,34;UBERON:0003075,1.03e-33,82;UBERON:0007284,1.03e-33,82;UBERON:0001049,3.38e-33,56;UBERON:0005068,3.38e-33,56;UBERON:0006241,3.38e-33,56;UBERON:0007135,3.38e-33,56;UBERON:0000956,8.28e-32,25;UBERON:0000203,8.28e-32,25;UBERON:0002346,2.83e-31,86;UBERON:0002619,8.62e-28,22;UBERON:0004121,4.62e-27,171;UBERON:0000924,4.62e-27,171;UBERON:0006601,4.62e-27,171;UBERON:0001950,2.79e-25,20;UBERON:0010371,1.23e-24,104;UBERON:0010314,3.20e-23,132;UBERON:0011216,5.79e-18,223;UBERON:0000025,2.01e-12,192;UBERON:0007023,9.10e-11,114;UBERON:0000483,1.18e-10,306;UBERON:0000119,2.52e-10,309;UBERON:0002420,1.80e-09,9;UBERON:0007245,1.80e-09,9;UBERON:0010009,1.80e-09,9;UBERON:0010011,1.80e-09,9;UBERON:0000454,1.80e-09,9;UBERON:0000200,4.69e-09,6;UBERON:0001872,6.47e-08,5;UBERON:0000349,6.65e-08,5;UBERON:0002021,6.93e-08,5;UBERON:0001871,7.81e-08,6;UBERON:0004111,2.70e-07,240;UBERON:0001801,4.71e-07,14;UBERON:0009663,5.22e-07,7|phase1_expression=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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2290 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3811 | |||
|TSSclassifier=S | |||
|UniProt=P55316 | |||
|association_with_transcript=-278bp_to_ENST00000313071,NM_005249,uc001wqe.2_5end | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_1_at_FOXG1_5end | |||
|id=chr14:29235961..29236008,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.93e-13!25;CL:0000133!1.13e-11!59;CL:0000243!7.81e-11!15;CL:0000125!7.81e-11!15;CL:0000030!7.81e-11!15;CL:0000339!7.81e-11!15;CL:0000095!2.32e-10!17;CL:0000123!2.32e-10!17;CL:0000333!1.70e-08!41;CL:0000221!2.41e-08!71;CL:0000128!9.77e-07!7;CL:0000126!9.77e-07!7;CL:0000127!9.77e-07!7;CL:0002453!9.77e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.18e-15;25!CL:0000243;3.81e-12;15!CL:0000125;3.81e-12;15!CL:0000095;7.80e-12;17!CL:0000128;7.31e-09;7!CL:0000126;7.31e-09;7!CL:0000127;7.31e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.89e-15,25;CL:0000133,2.07e-13,59;CL:0000243,3.84e-12,15;CL:0000125,3.84e-12,15;CL:0000030,3.84e-12,15;CL:0000339,3.84e-12,15;CL:0000095,7.06e-12,17;CL:0000123,7.06e-12,17;CL:0000221,3.70e-10,72;CL:0000128,6.80e-09,7;CL:0000126,6.80e-09,7;CL:0000127,6.80e-09,7;CL:0002453,6.80e-09,7;CL:0000333,9.59e-09,41 | |||
|ontology_enrichment_development_v019=CL:0000339;3.81e-12;15!UBERON:0006238;7.22e-09;10!CL:0000133;3.11e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.27e-31!61;UBERON:0001017!3.60e-31!82;UBERON:0005743!2.06e-30!86;UBERON:0002780!3.22e-29!41;UBERON:0001890!3.22e-29!41;UBERON:0006240!3.22e-29!41;UBERON:0000955!5.71e-29!69;UBERON:0006238!5.71e-29!69;UBERON:0001869!1.69e-28!32;UBERON:0000073!2.69e-28!94;UBERON:0001016!2.69e-28!94;UBERON:0003080!4.11e-28!42;UBERON:0001893!5.86e-28!34;UBERON:0002791!4.74e-27!33;UBERON:0000153!6.45e-27!129;UBERON:0007811!6.45e-27!129;UBERON:0003075!1.89e-26!86;UBERON:0007284!1.89e-26!86;UBERON:0000033!1.52e-25!123;UBERON:0002020!4.59e-25!34;UBERON:0003528!4.59e-25!34;UBERON:0002346!3.67e-24!90;UBERON:0002616!1.03e-22!59;UBERON:0004121!1.05e-22!169;UBERON:0000956!1.08e-22!25;UBERON:0000203!1.08e-22!25;UBERON:0001049!9.15e-22!57;UBERON:0005068!9.15e-22!57;UBERON:0006241!9.15e-22!57;UBERON:0007135!9.15e-22!57;UBERON:0000924!2.11e-21!173;UBERON:0006601!2.11e-21!173;UBERON:0002619!7.27e-20!22;UBERON:0001950!4.26e-18!20;UBERON:0000119!1.64e-11!312;UBERON:0000483!2.26e-11!309;UBERON:0000025!3.13e-11!194;UBERON:0000475!7.59e-11!365;UBERON:0000477!2.54e-08!286;UBERON:0000481!8.40e-08!347;UBERON:0007023!1.52e-07!115;UBERON:0000064!2.58e-07!219;UBERON:0004111!4.04e-07!241;UBERON:0002420!5.91e-07!9;UBERON:0007245!5.91e-07!9;UBERON:0010009!5.91e-07!9;UBERON:0010011!5.91e-07!9;UBERON:0000454!5.91e-07!9;UBERON:0001801!6.15e-07!14;UBERON:0000200!7.51e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.19e-36;32!UBERON:0001893;5.88e-35;34!UBERON:0002791;5.99e-34;32!UBERON:0000956;7.87e-32;25!UBERON:0000203;7.87e-32;25!UBERON:0003528;9.26e-31;34!UBERON:0002020;9.26e-31;34!UBERON:0002780;2.76e-30;41!UBERON:0001890;2.76e-30;41!UBERON:0002619;8.22e-28;22!UBERON:0001950;2.66e-25;20!UBERON:0000073;5.46e-21;53!UBERON:0002616;5.46e-21;53!UBERON:0000955;1.41e-19;68!UBERON:0001017;1.43e-19;75!UBERON:0001016;5.60e-16;83!UBERON:0002420;1.82e-09;9!UBERON:0007245;1.82e-09;9!UBERON:0010009;1.82e-09;9!UBERON:0010011;1.82e-09;9!UBERON:0000454;1.82e-09;9!UBERON:0000200;4.65e-09;6!UBERON:0001872;6.50e-08;5!UBERON:0000349;6.55e-08;5!UBERON:0002021;6.87e-08;5!UBERON:0001871;7.57e-08;6!UBERON:0001801;4.19e-07;14!UBERON:0009663;5.32e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.64e-45,81;UBERON:0000955,1.88e-42,68;UBERON:0006238,1.88e-42,68;UBERON:0001016,3.72e-42,89;UBERON:0002780,6.55e-42,41;UBERON:0001890,6.55e-42,41;UBERON:0003080,6.55e-42,41;UBERON:0006240,6.55e-42,41;UBERON:0003056,1.85e-40,61;UBERON:0001869,4.67e-40,32;UBERON:0001893,1.39e-39,34;UBERON:0002791,3.30e-37,32;UBERON:0000073,6.27e-36,53;UBERON:0002616,6.27e-36,53;UBERON:0003528,2.29e-34,34;UBERON:0002020,2.29e-34,34;UBERON:0003075,1.03e-33,82;UBERON:0007284,1.03e-33,82;UBERON:0001049,3.38e-33,56;UBERON:0005068,3.38e-33,56;UBERON:0006241,3.38e-33,56;UBERON:0007135,3.38e-33,56;UBERON:0000956,8.28e-32,25;UBERON:0000203,8.28e-32,25;UBERON:0002346,2.83e-31,86;UBERON:0002619,8.62e-28,22;UBERON:0004121,4.62e-27,171;UBERON:0000924,4.62e-27,171;UBERON:0006601,4.62e-27,171;UBERON:0001950,2.79e-25,20;UBERON:0010371,1.23e-24,104;UBERON:0010314,3.20e-23,132;UBERON:0011216,5.79e-18,223;UBERON:0000025,2.01e-12,192;UBERON:0007023,9.10e-11,114;UBERON:0000483,1.18e-10,306;UBERON:0000119,2.52e-10,309;UBERON:0002420,1.80e-09,9;UBERON:0007245,1.80e-09,9;UBERON:0010009,1.80e-09,9;UBERON:0010011,1.80e-09,9;UBERON:0000454,1.80e-09,9;UBERON:0000200,4.69e-09,6;UBERON:0001872,6.47e-08,5;UBERON:0000349,6.65e-08,5;UBERON:0002021,6.93e-08,5;UBERON:0001871,7.81e-08,6;UBERON:0004111,2.70e-07,240;UBERON:0001801,4.71e-07,14;UBERON:0009663,5.22e-07,7 | |||
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| |||
|short_description=p1@FOXG1 | |||
}} |
Revision as of 04:15, 11 September 2013
Short description: | p1@FOXG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FOXG1_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | -278bp_to_ENST00000313071, NM_005249, uc001wqe.2_5end |
EntrezGene: | FOXG1 |
HGNC: | 3811 |
UniProt: | P55316 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.89e-15 | 25 |
neurectodermal cell | 2.07e-13 | 59 |
glial cell (sensu Vertebrata) | 3.84e-12 | 15 |
glial cell | 3.84e-12 | 15 |
glioblast | 3.84e-12 | 15 |
glioblast (sensu Vertebrata) | 3.84e-12 | 15 |
neuron associated cell | 7.06e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 7.06e-12 | 17 |
ectodermal cell | 3.70e-10 | 72 |
oligodendrocyte | 6.80e-09 | 7 |
macroglial cell | 6.80e-09 | 7 |
astrocyte | 6.80e-09 | 7 |
oligodendrocyte precursor cell | 6.80e-09 | 7 |
migratory neural crest cell | 9.59e-09 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.