FFCP PHASE1:Hg19::chr1:239549933..239549960,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1131|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1952|TSSclassifier=S|UniProt=|association_with_transcript=68bp_to_ENST00000468573,uc001hyo.1_5end|coexpression_cluster_id=C1067|description=CAGE_peak_2_at_CHRM3_5end|id=chr1:239549933..239549960,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;7.47e-12;82!UBERON:0006238;7.74e-10;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.40e-46!115;UBERON:0001017!5.74e-35!82;UBERON:0005743!5.75e-35!86;UBERON:0001049!3.58e-32!57;UBERON:0005068!3.58e-32!57;UBERON:0006241!3.58e-32!57;UBERON:0007135!3.58e-32!57;UBERON:0000073!6.40e-32!94;UBERON:0001016!6.40e-32!94;UBERON:0000955!7.34e-32!69;UBERON:0006238!7.34e-32!69;UBERON:0002780!1.12e-30!41;UBERON:0001890!1.12e-30!41;UBERON:0006240!1.12e-30!41;UBERON:0003080!1.35e-29!42;UBERON:0001869!2.24e-28!32;UBERON:0003075!2.89e-28!86;UBERON:0007284!2.89e-28!86;UBERON:0001893!9.67e-28!34;UBERON:0002020!4.20e-27!34;UBERON:0003528!4.20e-27!34;UBERON:0002791!1.06e-26!33;UBERON:0002616!2.78e-26!59;UBERON:0002346!4.77e-26!90;UBERON:0002619!1.21e-25!22;UBERON:0001950!1.58e-23!20;UBERON:0003056!2.03e-23!61;UBERON:0000956!3.97e-23!25;UBERON:0000203!3.97e-23!25;UBERON:0000153!7.78e-21!129;UBERON:0007811!7.78e-21!129;UBERON:0000033!2.26e-20!123;UBERON:0004121!1.31e-18!169;UBERON:0000924!1.37e-17!173;UBERON:0006601!1.37e-17!173;UBERON:0000062!3.38e-13!511;UBERON:0000481!8.92e-12!347;UBERON:0000475!5.14e-10!365;UBERON:0001871!5.98e-10!7;UBERON:0000922!2.35e-09!612;UBERON:0000468!1.04e-08!659;UBERON:0004111!1.08e-08!241;UBERON:0000477!2.83e-08!286;UBERON:0000200!4.30e-08!6;UBERON:0002050!1.07e-07!605;UBERON:0005423!1.07e-07!605;UBERON:0000025!1.70e-07!194;UBERON:0000467!1.91e-07!625;UBERON:0000923!1.93e-07!604;UBERON:0005291!1.93e-07!604;UBERON:0006598!1.93e-07!604;UBERON:0002532!1.93e-07!604;UBERON:0000480!2.31e-07!626;UBERON:0000064!3.25e-07!219;UBERON:0002021!7.26e-07!5;UBERON:0000349!8.33e-07!5|ontology_enrichment_uberon_v019=UBERON:0002619;3.34e-46;22!UBERON:0001950;2.53e-42;20!UBERON:0001869;4.36e-40;32!UBERON:0000956;5.59e-40;25!UBERON:0000203;5.59e-40;25!UBERON:0002791;3.10e-37;32!UBERON:0001893;9.85e-36;34!UBERON:0003528;2.15e-34;34!UBERON:0002020;2.15e-34;34!UBERON:0002780;1.75e-26;41!UBERON:0001890;1.75e-26;41!UBERON:0000073;6.22e-17;53!UBERON:0002616;6.22e-17;53!UBERON:0001017;7.54e-17;75!UBERON:0000955;5.49e-16;68!UBERON:0001871;4.80e-15;6!UBERON:0001016;3.47e-14;83!UBERON:0000200;1.19e-13;6!UBERON:0002021;2.11e-11;5!UBERON:0000349;3.11e-11;5!UBERON:0001872;4.66e-11;5!UBERON:0007023;2.02e-10;114!UBERON:0011216;3.20e-09;132!UBERON:0004921;4.38e-08;33!UBERON:0001870;1.06e-07;3!UBERON:0002420;1.79e-07;9!UBERON:0007245;1.79e-07;9!UBERON:0010009;1.79e-07;9!UBERON:0010011;1.79e-07;9!UBERON:0000454;1.79e-07;9!UBERON:0000160;1.79e-07;17!UBERON:0002108;8.94e-07;4!UBERON:0005409;9.67e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.39e-46,22;UBERON:0001869,1.28e-44,32;UBERON:0001950,2.93e-42,20;UBERON:0001893,1.54e-41,34;UBERON:0002791,3.83e-41,32;UBERON:0007023,2.11e-40,114;UBERON:0000956,5.66e-40,25;UBERON:0000203,5.66e-40,25;UBERON:0003528,2.77e-38,34;UBERON:0002020,2.77e-38,34;UBERON:0002780,5.39e-38,41;UBERON:0001890,5.39e-38,41;UBERON:0003080,5.39e-38,41;UBERON:0006240,5.39e-38,41;UBERON:0000955,2.36e-36,68;UBERON:0006238,2.36e-36,68;UBERON:0001017,5.79e-34,81;UBERON:0000073,2.03e-31,53;UBERON:0002616,2.03e-31,53;UBERON:0001016,4.63e-31,89;UBERON:0001049,3.12e-29,56;UBERON:0005068,3.12e-29,56;UBERON:0006241,3.12e-29,56;UBERON:0007135,3.12e-29,56;UBERON:0011216,5.72e-27,223;UBERON:0003056,3.69e-26,61;UBERON:0003075,1.20e-19,82;UBERON:0007284,1.20e-19,82;UBERON:0002346,2.77e-18,86;UBERON:0004121,1.28e-16,171;UBERON:0000924,1.28e-16,171;UBERON:0006601,1.28e-16,171;UBERON:0001871,4.87e-15,6;UBERON:0010371,1.61e-14,104;UBERON:0000200,1.25e-13,6;UBERON:0010314,1.24e-12,132;UBERON:0002021,2.26e-11,5;UBERON:0000349,2.90e-11,5;UBERON:0001872,4.97e-11,5;UBERON:0004111,5.32e-08,240;UBERON:0001870,1.07e-07,3;UBERON:0000160,1.69e-07,17;UBERON:0002420,1.82e-07,9;UBERON:0007245,1.82e-07,9;UBERON:0010009,1.82e-07,9;UBERON:0010011,1.82e-07,9;UBERON:0000454,1.82e-07,9;UBERON:0002108,7.73e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,1.46800219667424,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,4.48406850385229,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1131 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1952 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=68bp_to_ENST00000468573,uc001hyo.1_5end | |||
|coexpression_cluster_id=C1067 | |||
|description=CAGE_peak_2_at_CHRM3_5end | |||
|id=chr1:239549933..239549960,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.47e-12;82!UBERON:0006238;7.74e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.40e-46!115;UBERON:0001017!5.74e-35!82;UBERON:0005743!5.75e-35!86;UBERON:0001049!3.58e-32!57;UBERON:0005068!3.58e-32!57;UBERON:0006241!3.58e-32!57;UBERON:0007135!3.58e-32!57;UBERON:0000073!6.40e-32!94;UBERON:0001016!6.40e-32!94;UBERON:0000955!7.34e-32!69;UBERON:0006238!7.34e-32!69;UBERON:0002780!1.12e-30!41;UBERON:0001890!1.12e-30!41;UBERON:0006240!1.12e-30!41;UBERON:0003080!1.35e-29!42;UBERON:0001869!2.24e-28!32;UBERON:0003075!2.89e-28!86;UBERON:0007284!2.89e-28!86;UBERON:0001893!9.67e-28!34;UBERON:0002020!4.20e-27!34;UBERON:0003528!4.20e-27!34;UBERON:0002791!1.06e-26!33;UBERON:0002616!2.78e-26!59;UBERON:0002346!4.77e-26!90;UBERON:0002619!1.21e-25!22;UBERON:0001950!1.58e-23!20;UBERON:0003056!2.03e-23!61;UBERON:0000956!3.97e-23!25;UBERON:0000203!3.97e-23!25;UBERON:0000153!7.78e-21!129;UBERON:0007811!7.78e-21!129;UBERON:0000033!2.26e-20!123;UBERON:0004121!1.31e-18!169;UBERON:0000924!1.37e-17!173;UBERON:0006601!1.37e-17!173;UBERON:0000062!3.38e-13!511;UBERON:0000481!8.92e-12!347;UBERON:0000475!5.14e-10!365;UBERON:0001871!5.98e-10!7;UBERON:0000922!2.35e-09!612;UBERON:0000468!1.04e-08!659;UBERON:0004111!1.08e-08!241;UBERON:0000477!2.83e-08!286;UBERON:0000200!4.30e-08!6;UBERON:0002050!1.07e-07!605;UBERON:0005423!1.07e-07!605;UBERON:0000025!1.70e-07!194;UBERON:0000467!1.91e-07!625;UBERON:0000923!1.93e-07!604;UBERON:0005291!1.93e-07!604;UBERON:0006598!1.93e-07!604;UBERON:0002532!1.93e-07!604;UBERON:0000480!2.31e-07!626;UBERON:0000064!3.25e-07!219;UBERON:0002021!7.26e-07!5;UBERON:0000349!8.33e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.34e-46;22!UBERON:0001950;2.53e-42;20!UBERON:0001869;4.36e-40;32!UBERON:0000956;5.59e-40;25!UBERON:0000203;5.59e-40;25!UBERON:0002791;3.10e-37;32!UBERON:0001893;9.85e-36;34!UBERON:0003528;2.15e-34;34!UBERON:0002020;2.15e-34;34!UBERON:0002780;1.75e-26;41!UBERON:0001890;1.75e-26;41!UBERON:0000073;6.22e-17;53!UBERON:0002616;6.22e-17;53!UBERON:0001017;7.54e-17;75!UBERON:0000955;5.49e-16;68!UBERON:0001871;4.80e-15;6!UBERON:0001016;3.47e-14;83!UBERON:0000200;1.19e-13;6!UBERON:0002021;2.11e-11;5!UBERON:0000349;3.11e-11;5!UBERON:0001872;4.66e-11;5!UBERON:0007023;2.02e-10;114!UBERON:0011216;3.20e-09;132!UBERON:0004921;4.38e-08;33!UBERON:0001870;1.06e-07;3!UBERON:0002420;1.79e-07;9!UBERON:0007245;1.79e-07;9!UBERON:0010009;1.79e-07;9!UBERON:0010011;1.79e-07;9!UBERON:0000454;1.79e-07;9!UBERON:0000160;1.79e-07;17!UBERON:0002108;8.94e-07;4!UBERON:0005409;9.67e-07;22 | |||
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| |||
|short_description=p2@CHRM3 | |||
}} |
Revision as of 04:30, 12 September 2013
Short description: | p2@CHRM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CHRM3_5end |
Coexpression cluster: | C1067_ductus_salivary_smooth_submaxillary_medial_parotid_seminal |
Association with transcript: | 68bp_to_ENST00000468573, uc001hyo.1_5end |
EntrezGene: | CHRM3 |
HGNC: | 1952 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.