FFCP PHASE1:Hg19::chr22:40573904..40573915,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23112 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29190 | |||
|TSSclassifier=S | |||
|UniProt=A8MYY3,Q9UPQ9 | |||
|association_with_transcript=-13bp_to_ENST00000400140,ENST00000454349,ENST00000489500,NM_001162501,NM_015088,uc003ayn.3,uc011aor.1_5end | |||
|description=CAGE_peak_7_at_TNRC6B_5end | |||
|id=chr22:40573904..40573915,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.57e-13;2!CL:0000558;3.57e-13;2!CL:0002591;2.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.46e-13,2;CL:0000765,8.46e-13,2;CL:0000050,8.46e-13,2;CL:0000038,8.46e-13,2;CL:0000558,8.46e-13,2;CL:0000547,8.46e-13,2;CL:0000549,8.46e-13,2;CL:0000550,8.46e-13,2;CL:0000552,8.46e-13,2;CL:0002591,3.20e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.51e-57,22;UBERON:0000956,2.32e-50,25;UBERON:0000203,2.32e-50,25;UBERON:0001950,4.15e-47,20;UBERON:0003528,8.15e-42,34;UBERON:0002020,8.15e-42,34;UBERON:0002791,4.98e-39,32;UBERON:0001869,4.98e-39,32;UBERON:0001893,1.27e-36,34;UBERON:0002780,2.77e-34,41;UBERON:0001890,2.77e-34,41;UBERON:0003080,2.77e-34,41;UBERON:0006240,2.77e-34,41;UBERON:0000073,4.06e-33,53;UBERON:0002616,4.06e-33,53;UBERON:0001049,3.54e-31,56;UBERON:0005068,3.54e-31,56;UBERON:0006241,3.54e-31,56;UBERON:0007135,3.54e-31,56;UBERON:0000955,3.97e-31,68;UBERON:0006238,3.97e-31,68;UBERON:0001017,1.59e-28,81;UBERON:0000200,2.83e-26,6;UBERON:0001016,2.62e-25,89;UBERON:0003075,1.05e-22,82;UBERON:0007284,1.05e-22,82;UBERON:0003056,3.77e-22,61;UBERON:0002346,1.77e-21,86;UBERON:0007023,2.98e-19,114;UBERON:0010371,3.33e-19,104;UBERON:0001870,3.53e-19,3;UBERON:0004121,1.46e-15,171;UBERON:0000924,1.46e-15,171;UBERON:0006601,1.46e-15,171;UBERON:0010314,2.79e-14,132;UBERON:0002771,7.10e-14,2;UBERON:0002702,7.10e-14,2;UBERON:0001954,1.82e-13,2;UBERON:0003022,1.82e-13,2;UBERON:0002421,1.82e-13,2;UBERON:0002600,1.82e-13,2;UBERON:0000349,5.57e-12,5;UBERON:0011216,5.57e-12,223;UBERON:0002021,1.55e-11,5;UBERON:0001872,1.73e-11,5;UBERON:0001871,7.37e-09,6;UBERON:0000025,1.48e-08,192;UBERON:0002022,1.10e-07,1;UBERON:0007029,1.61e-07,1;UBERON:0003112,1.72e-07,1;UBERON:0011158,1.72e-07,1;UBERON:0003128,1.72e-07,1;UBERON:0001703,1.72e-07,1;UBERON:0002241,1.72e-07,1;UBERON:0004761,1.72e-07,1;UBERON:0009617,1.72e-07,1;UBERON:0002581,2.50e-07,1;UBERON:0004111,7.09e-07,240 | |||
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| |||
|short_description=p7@TNRC6B | |||
}} |
Revision as of 12:06, 12 September 2013
Short description: | p7@TNRC6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_TNRC6B_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000400140, ENST00000454349, ENST00000489500, NM_001162501, NM_015088, uc003ayn.3, uc011aor.1_5end |
EntrezGene: | TNRC6B |
HGNC: | 29190 |
UniProt: | A8MYY3Q9UPQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.46e-13 | 2 |
erythroblast | 8.46e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 8.46e-13 | 2 |
erythroid progenitor cell | 8.46e-13 | 2 |
reticulocyte | 8.46e-13 | 2 |
proerythroblast | 8.46e-13 | 2 |
basophilic erythroblast | 8.46e-13 | 2 |
polychromatophilic erythroblast | 8.46e-13 | 2 |
orthochromatic erythroblast | 8.46e-13 | 2 |
smooth muscle cell of the pulmonary artery | 3.20e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.