FFCP PHASE1:Mm9::chr10:102830326..102830381,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=103098|HGNC=|MCL_coexpression_id=1|UniProt=Q8BG16|association_with_transcript=-60bp_to_NM_001252330,NM_175328_5end|description=CAGE_peak_2_at_Slc6a15_5end|id=chr10:102830326..102830381,+|ontology_enrichment_celltype=CL:0000540!1.75e-15!33;CL:0000047!1.75e-15!33;CL:0000031!1.75e-15!33;CL:0000404!1.75e-15!33;CL:0000221!1.80e-13!44;CL:0000133!1.80e-13!44;CL:0002319!5.03e-13!43;CL:0000393!1.43e-11!39;CL:0000211!1.43e-11!39;CL:0000117!1.14e-10!23;CL:0000337!1.14e-10!23;CL:0000055!1.49e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.20e-18,33;CL:0000047,1.20e-18,33;CL:0000031,1.20e-18,33;CL:0000404,1.20e-18,33;CL:0000221,2.85e-16,44;CL:0000133,2.85e-16,44;CL:0002319,1.11e-15,43;CL:0000393,5.74e-14,39;CL:0000211,5.74e-14,39;CL:0000117,3.81e-13,23;CL:0000337,3.81e-13,23;CL:0000107,1.15e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.31e-32!102;UBERON:0000924!1.31e-32!102;UBERON:0006601!1.31e-32!102;UBERON:0002346!1.00e-30!71;UBERON:0003075!1.00e-30!71;UBERON:0007284!1.00e-30!71;UBERON:0000073!1.26e-29!75;UBERON:0001016!1.26e-29!75;UBERON:0001017!3.96e-29!73;UBERON:0005743!3.96e-29!73;UBERON:0000033!9.34e-25!63;UBERON:0001049!4.19e-22!52;UBERON:0005068!4.19e-22!52;UBERON:0006241!4.19e-22!52;UBERON:0007135!4.19e-22!52;UBERON:0000955!6.56e-21!50;UBERON:0006238!6.56e-21!50;UBERON:0002616!2.45e-20!49;UBERON:0003056!4.56e-20!49;UBERON:0002020!1.73e-17!34;UBERON:0003080!3.53e-16!40;UBERON:0002780!1.50e-15!39;UBERON:0001890!1.50e-15!39;UBERON:0006240!1.50e-15!39;UBERON:0002791!1.56e-14!29;UBERON:0003528!1.56e-14!29;UBERON:0001893!1.56e-14!29;UBERON:0007811!7.12e-11!86;UBERON:0000956!1.95e-10!21;UBERON:0001869!1.95e-10!21;UBERON:0000203!1.95e-10!21;UBERON:0000153!1.96e-09!94;UBERON:0002619!7.29e-09!17;UBERON:0002021!5.62e-08!10;UBERON:0000411!5.62e-08!10;UBERON:0001950!5.62e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.21e-36,95;UBERON:0000924,9.21e-36,95;UBERON:0006601,9.21e-36,95;UBERON:0002346,9.26e-36,64;UBERON:0003075,9.26e-36,64;UBERON:0007284,9.26e-36,64;UBERON:0001017,1.67e-35,73;UBERON:0001016,2.92e-35,75;UBERON:0010371,6.51e-30,73;UBERON:0000073,2.07e-29,54;UBERON:0001049,1.36e-27,52;UBERON:0005068,1.36e-27,52;UBERON:0006241,1.36e-27,52;UBERON:0007135,1.36e-27,52;UBERON:0010314,1.39e-26,92;UBERON:0003056,1.77e-24,49;UBERON:0002020,1.49e-23,34;UBERON:0000955,3.17e-23,47;UBERON:0006238,3.17e-23,47;UBERON:0002616,1.76e-22,46;UBERON:0003528,1.53e-19,29;UBERON:0002791,1.53e-19,29;UBERON:0001893,1.53e-19,29;UBERON:0003080,2.78e-19,40;UBERON:0002780,1.86e-18,39;UBERON:0001890,1.86e-18,39;UBERON:0006240,1.86e-18,39;UBERON:0000956,5.50e-14,21;UBERON:0001869,5.50e-14,21;UBERON:0000203,5.50e-14,21;UBERON:0002619,7.29e-12,17;UBERON:0002021,3.10e-10,10;UBERON:0000411,3.10e-10,10;UBERON:0001950,3.10e-10,10;UBERON:0003076,7.51e-09,12;UBERON:0003057,7.51e-09,12;UBERON:0002410,1.15e-07,9;UBERON:0000010,5.10e-07,11;UBERON:0002420,9.47e-07,8;UBERON:0007245,9.47e-07,8;UBERON:0010009,9.47e-07,8;UBERON:0010011,9.47e-07,8;UBERON:0000454,9.47e-07,8|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,2.39827672018491,0,2.3331587888914,0.55994568650145,1.43752564364972,0,0.725362142011344,0.336093799142464,0,0.286533439938757,0,1.21389876515759,2.64495489636016,0.633831403506179,0.338844532069132,0,0,0,0,0,0,2.28117147078651,2.16009501330705,1.89292465216244,8.56952953211411,7.50953039235486,1.95985278743926,1.62937300731002,1.83843757322004,8.8092704799511,12.7687338085188,19.6616362567992,2.2420668914133,2.92760459527711,3.64639359389732,7.81712397203867,9.00420176050688,8.40390362772456,8.83885756421003,12.5287079103211,4.47358669980721,0.908714319998209,2.19157524309678,0,0,0,0,0,0,0.983110940922263,0,0,0,3.38024207464033,0,0,0,0,0.253359865475099,0,0.22836775943812,0,4.30482203287992,1.21439728736295,1.82679286987285,1.61430848079241,2.86373017049983,1.52865319276416,2.26199864393416,0.494389935468748,0.433798070759735,0.884610551949874,0.647067399789637,0,0.969750506270444,0,10.2473278954042,9.42510180660548,0,0,0,0,9.43681028250383,16.0125210986519,4.39790232395025,16.5133104182663,7.67146371990992,8.3115217823824,9.89671704713322,0.81471491080253,0.373220911830279,1.0108910337347,2.94618598241064,2.60240885925407,1.60931473103431,4.14142898552303,2.86339153887859,2.9255694635071,3.71529788826064,2.15513966487376,6.98499100995342,0,0,0.703804496655795,0.219195732427575,0.278047249225598,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0.493679549740441,0.164167464079095,0,0,0,0.134206418760372,16.1923260394378,7.71784592844633,0,0,0.426576501070468,0.928946687441754,0.77320476793256,0.605050573870028,0.444756087689741,0,0,0.329397909448022,0,0,0.38992817423824,0,0,0.199141273254367,0.569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| ||
|EntrezGene=103098 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BG16 | |||
|association_with_transcript=-60bp_to_NM_001252330,NM_175328_5end | |||
|description=CAGE_peak_2_at_Slc6a15_5end | |||
|id=chr10:102830326..102830381,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.75e-15!33;CL:0000047!1.75e-15!33;CL:0000031!1.75e-15!33;CL:0000404!1.75e-15!33;CL:0000221!1.80e-13!44;CL:0000133!1.80e-13!44;CL:0002319!5.03e-13!43;CL:0000393!1.43e-11!39;CL:0000211!1.43e-11!39;CL:0000117!1.14e-10!23;CL:0000337!1.14e-10!23;CL:0000055!1.49e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.20e-18,33;CL:0000047,1.20e-18,33;CL:0000031,1.20e-18,33;CL:0000404,1.20e-18,33;CL:0000221,2.85e-16,44;CL:0000133,2.85e-16,44;CL:0002319,1.11e-15,43;CL:0000393,5.74e-14,39;CL:0000211,5.74e-14,39;CL:0000117,3.81e-13,23;CL:0000337,3.81e-13,23;CL:0000107,1.15e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.31e-32!102;UBERON:0000924!1.31e-32!102;UBERON:0006601!1.31e-32!102;UBERON:0002346!1.00e-30!71;UBERON:0003075!1.00e-30!71;UBERON:0007284!1.00e-30!71;UBERON:0000073!1.26e-29!75;UBERON:0001016!1.26e-29!75;UBERON:0001017!3.96e-29!73;UBERON:0005743!3.96e-29!73;UBERON:0000033!9.34e-25!63;UBERON:0001049!4.19e-22!52;UBERON:0005068!4.19e-22!52;UBERON:0006241!4.19e-22!52;UBERON:0007135!4.19e-22!52;UBERON:0000955!6.56e-21!50;UBERON:0006238!6.56e-21!50;UBERON:0002616!2.45e-20!49;UBERON:0003056!4.56e-20!49;UBERON:0002020!1.73e-17!34;UBERON:0003080!3.53e-16!40;UBERON:0002780!1.50e-15!39;UBERON:0001890!1.50e-15!39;UBERON:0006240!1.50e-15!39;UBERON:0002791!1.56e-14!29;UBERON:0003528!1.56e-14!29;UBERON:0001893!1.56e-14!29;UBERON:0007811!7.12e-11!86;UBERON:0000956!1.95e-10!21;UBERON:0001869!1.95e-10!21;UBERON:0000203!1.95e-10!21;UBERON:0000153!1.96e-09!94;UBERON:0002619!7.29e-09!17;UBERON:0002021!5.62e-08!10;UBERON:0000411!5.62e-08!10;UBERON:0001950!5.62e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.21e-36,95;UBERON:0000924,9.21e-36,95;UBERON:0006601,9.21e-36,95;UBERON:0002346,9.26e-36,64;UBERON:0003075,9.26e-36,64;UBERON:0007284,9.26e-36,64;UBERON:0001017,1.67e-35,73;UBERON:0001016,2.92e-35,75;UBERON:0010371,6.51e-30,73;UBERON:0000073,2.07e-29,54;UBERON:0001049,1.36e-27,52;UBERON:0005068,1.36e-27,52;UBERON:0006241,1.36e-27,52;UBERON:0007135,1.36e-27,52;UBERON:0010314,1.39e-26,92;UBERON:0003056,1.77e-24,49;UBERON:0002020,1.49e-23,34;UBERON:0000955,3.17e-23,47;UBERON:0006238,3.17e-23,47;UBERON:0002616,1.76e-22,46;UBERON:0003528,1.53e-19,29;UBERON:0002791,1.53e-19,29;UBERON:0001893,1.53e-19,29;UBERON:0003080,2.78e-19,40;UBERON:0002780,1.86e-18,39;UBERON:0001890,1.86e-18,39;UBERON:0006240,1.86e-18,39;UBERON:0000956,5.50e-14,21;UBERON:0001869,5.50e-14,21;UBERON:0000203,5.50e-14,21;UBERON:0002619,7.29e-12,17;UBERON:0002021,3.10e-10,10;UBERON:0000411,3.10e-10,10;UBERON:0001950,3.10e-10,10;UBERON:0003076,7.51e-09,12;UBERON:0003057,7.51e-09,12;UBERON:0002410,1.15e-07,9;UBERON:0000010,5.10e-07,11;UBERON:0002420,9.47e-07,8;UBERON:0007245,9.47e-07,8;UBERON:0010009,9.47e-07,8;UBERON:0010011,9.47e-07,8;UBERON:0000454,9.47e-07,8 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,2.39827672018491,0,2.3331587888914,0.55994568650145,1.43752564364972,0,0.725362142011344,0.336093799142464,0,0.286533439938757,0,1.21389876515759,2.64495489636016,0.633831403506179,0.338844532069132,0,0,0,0,0,0,2.28117147078651,2.16009501330705,1.89292465216244,8.56952953211411,7.50953039235486,1.95985278743926,1.62937300731002,1.83843757322004,8.8092704799511,12.7687338085188,19.6616362567992,2.2420668914133,2.92760459527711,3.64639359389732,7.81712397203867,9.00420176050688,8.40390362772456,8.83885756421003,12.5287079103211,4.47358669980721,0.908714319998209,2.19157524309678,0,0,0,0,0,0,0.983110940922263,0,0,0,3.38024207464033,0,0,0,0,0.253359865475099,0,0.22836775943812,0,4.30482203287992,1.21439728736295,1.82679286987285,1.61430848079241,2.86373017049983,1.52865319276416,2.26199864393416,0.494389935468748,0.433798070759735,0.884610551949874,0.647067399789637,0,0.969750506270444,0,10.2473278954042,9.42510180660548,0,0,0,0,9.43681028250383,16.0125210986519,4.39790232395025,16.5133104182663,7.67146371990992,8.3115217823824,9.89671704713322,0.81471491080253,0.373220911830279,1.0108910337347,2.94618598241064,2.60240885925407,1.60931473103431,4.14142898552303,2.86339153887859,2.9255694635071,3.71529788826064,2.15513966487376,6.98499100995342,0,0,0.703804496655795,0.219195732427575,0.278047249225598,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0.493679549740441,0.164167464079095,0,0,0,0.134206418760372,16.1923260394378,7.71784592844633,0,0,0.426576501070468,0.928946687441754,0.77320476793256,0.605050573870028,0.444756087689741,0,0,0.329397909448022,0,0,0.38992817423824,0,0,0.199141273254367,0.569003702859245,1.14248512609729,2.25415471346161,2.03651327845314,2.32742984601151,1.1221731182451,3.03535378196435,3.54264355151045,2.66897837330337,2.22114895059241,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0.189491411770485,0.488894929326078,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.655453258862952,0.172684981865896,0.144649058581512,0,0,0,0,14.2890025089135,12.0728037189969,0.491804836130026,0,7.2566890465739,4.68526493155966,9.26320610251035,4.54040716109849,3.34198011123591,5.37845408498782,6.8817819284732,8.47541987942804,11.8586333383957,7.06906896127976,2.12910127812403,0.35613120733451,0.488660878060728,1.31976098378028,2.65490276679926,0.242780636154981,0.302323556964751,0,0,0,0,0,0.712994756769443,0.316036757935816,1.05418608574999,0,0.680879211507576,1.08036656418786,0.129358683782755,2.14337035031592,0.532020700926821,0.891844088010353,1.81003922662333,1.2178597964584,0.23467170806371,0,0.220528398054962,0.49465875882444,0.161464426695906,0.241251699712623,0,0,0,23.9198639593557,0.170870880797853,0,0,0,0,0,0.509935289981566,0.279902904647316,0.276399947608848,0,0.316335993581135,0.203319467126849,0.432021363287205,1.46361807210128,0.436725127492355,0.269728692769641,0.578574190077352,0,0.259229946583586,0,0,0.897099276263873,0.66183396182839,1.55560950675238,1.16243841129958,2.02747350588934,0.938857909166032,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,1.13365191807606,0.221985953374065,0,0,0.772758376128762,0.187682475451182,0.73260649706906,0.214368379079066,0,23.1548255472997,15.1907328047368,18.3326564300607,14.7793736815571,11.6464028361009,17.3740596399631,11.4753825039407,8.55610286126019,13.5942722695261,6.73088405277366,0.31136204275253,0,0.682934423016537,0.729320151204882,0.838452650511929,0.735374033800057,1.55572709461131,1.44224540067226,1.28367683836726,1.76888048234658,2.02783439912192,1.32038438970253,0.749132059759059,1.60062881012173,1.78049953762401,1.90517476513229,1.27472758539341,1.15745532278223,1.23625770240992,1.32479028120958,0.342869252385415,1.06485483695602,1.66905332963125,2.47088908274958,0.941093804153306,1.60767754994185,0.548783918618318,2.10455769150274,0.814824683075171,1.68342681497322,0.830445126869219,0.886540341380071,1.63692417267876,1.70430525304563,0.964533054905707,0.249810577937946,1.16965804222704,0.644613162144895,1.53030665655075,1.76473135295612,0.927471342481686 | |||
|short_description=p2@Slc6a15 | |||
}} |
Revision as of 15:37, 12 September 2013
Short description: | p2@Slc6a15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc6a15_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -60bp_to_NM_001252330, NM_175328_5end |
EntrezGene: | Slc6a15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.20e-18 | 33 |
neuronal stem cell | 1.20e-18 | 33 |
neuroblast | 1.20e-18 | 33 |
electrically signaling cell | 1.20e-18 | 33 |
ectodermal cell | 2.85e-16 | 44 |
neurectodermal cell | 2.85e-16 | 44 |
neural cell | 1.11e-15 | 43 |
electrically responsive cell | 5.74e-14 | 39 |
electrically active cell | 5.74e-14 | 39 |
CNS neuron (sensu Vertebrata) | 3.81e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.81e-13 | 23 |
autonomic neuron | 1.15e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.