FFCP PHASE1:Mm9::chr12:16660574..16660581,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=491|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:16660574..16660581,+|id=chr12:16660574..16660581,+|ontology_enrichment_celltype=CL:0002614!1.69e-07!3;CL:0002610!2.03e-07!3;CL:0000117!5.03e-07!23;CL:0000337!5.03e-07!23;CL:0002319!7.32e-07!43|ontology_enrichment_celltype_v019_2=CL:0002614,2.40e-10,3;CL:0002610,3.15e-10,3;CL:0000117,4.97e-09,23;CL:0000337,4.97e-09,23;CL:0002319,1.82e-07,43;CL:0000221,3.05e-07,44;CL:0000133,3.05e-07,44;CL:0000878,8.62e-07,2;CL:0000129,8.62e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.69e-30!73;UBERON:0005743!1.69e-30!73;UBERON:0000073!1.97e-29!75;UBERON:0001016!1.97e-29!75;UBERON:0001049!8.78e-25!52;UBERON:0005068!8.78e-25!52;UBERON:0006241!8.78e-25!52;UBERON:0007135!8.78e-25!52;UBERON:0000955!1.38e-24!50;UBERON:0006238!1.38e-24!50;UBERON:0002616!2.55e-23!49;UBERON:0004121!4.07e-19!102;UBERON:0000924!4.07e-19!102;UBERON:0006601!4.07e-19!102;UBERON:0000033!6.00e-18!63;UBERON:0002020!6.70e-18!34;UBERON:0002346!4.38e-16!71;UBERON:0003075!4.38e-16!71;UBERON:0007284!4.38e-16!71;UBERON:0003080!8.40e-15!40;UBERON:0002021!4.17e-14!10;UBERON:0000411!4.17e-14!10;UBERON:0001950!4.17e-14!10;UBERON:0002791!1.51e-13!29;UBERON:0003528!1.51e-13!29;UBERON:0001893!1.51e-13!29;UBERON:0002780!1.77e-13!39;UBERON:0001890!1.77e-13!39;UBERON:0006240!1.77e-13!39;UBERON:0002298!5.16e-13!6;UBERON:0000025!5.55e-12!114;UBERON:0003076!1.83e-11!12;UBERON:0003057!1.83e-11!12;UBERON:0007811!3.55e-11!86;UBERON:0002619!4.03e-11!17;UBERON:0003056!4.07e-11!49;UBERON:0004111!1.24e-10!122;UBERON:0000956!2.19e-10!21;UBERON:0001869!2.19e-10!21;UBERON:0000203!2.19e-10!21;UBERON:0000153!1.29e-09!94;UBERON:0002950!2.10e-09!4;UBERON:0001891!2.10e-09!4;UBERON:0009616!2.10e-09!4;UBERON:0002240!1.03e-07!6;UBERON:0005174!1.03e-07!6;UBERON:0001137!1.03e-07!6;UBERON:0002038!1.69e-07!3;UBERON:0002308!1.69e-07!3;UBERON:0009663!1.69e-07!3;UBERON:0009661!1.69e-07!3;UBERON:0006331!1.69e-07!3;UBERON:0000125!1.69e-07!3;UBERON:0004684!2.03e-07!3;UBERON:0002275!2.03e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.65e-33,54;UBERON:0001017,2.38e-32,73;UBERON:0001016,2.44e-31,75;UBERON:0001049,4.74e-29,52;UBERON:0005068,4.74e-29,52;UBERON:0006241,4.74e-29,52;UBERON:0007135,4.74e-29,52;UBERON:0004121,1.49e-23,95;UBERON:0000924,1.49e-23,95;UBERON:0006601,1.49e-23,95;UBERON:0002616,6.03e-23,46;UBERON:0002346,1.22e-22,64;UBERON:0003075,1.22e-22,64;UBERON:0007284,1.22e-22,64;UBERON:0000955,2.32e-22,47;UBERON:0006238,2.32e-22,47;UBERON:0002020,3.90e-20,34;UBERON:0010371,3.28e-19,73;UBERON:0003080,4.04e-17,40;UBERON:0002021,2.76e-16,10;UBERON:0000411,2.76e-16,10;UBERON:0001950,2.76e-16,10;UBERON:0003528,2.80e-16,29;UBERON:0002791,2.80e-16,29;UBERON:0001893,2.80e-16,29;UBERON:0002780,2.47e-15,39;UBERON:0001890,2.47e-15,39;UBERON:0006240,2.47e-15,39;UBERON:0010314,3.60e-14,92;UBERON:0003076,1.93e-13,12;UBERON:0003057,1.93e-13,12;UBERON:0003056,2.71e-13,49;UBERON:0002950,3.70e-13,4;UBERON:0001891,3.70e-13,4;UBERON:0009616,3.70e-13,4;UBERON:0010286,3.70e-13,4;UBERON:0002619,1.94e-11,17;UBERON:0000956,3.27e-11,21;UBERON:0001869,3.27e-11,21;UBERON:0000203,3.27e-11,21;UBERON:0000025,1.99e-10,114;UBERON:0002038,2.40e-10,3;UBERON:0009663,2.40e-10,3;UBERON:0009661,2.40e-10,3;UBERON:0000125,2.40e-10,3;UBERON:0002308,2.40e-10,3;UBERON:0004684,3.15e-10,3;UBERON:0002275,3.15e-10,3;UBERON:0004111,2.11e-09,122;UBERON:0011216,1.54e-08,194;UBERON:0004733,1.48e-07,6;UBERON:0004732,1.48e-07,6;UBERON:0002028,1.48e-07,6;UBERON:0007277,1.48e-07,6;UBERON:0002240,2.13e-07,6;UBERON:0005174,2.13e-07,6;UBERON:0001137,2.13e-07,6;UBERON:0001896,5.79e-07,2;UBERON:0002298,5.79e-07,2;UBERON:0005290,5.79e-07,2;UBERON:0010096,5.79e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39680088414724,4.99483796918021,0,0,0,2.85650984403804,1.32521124570968,0,0,0,18.7196997698961,5.2351808614927,6.14426133024974,0,0,0,8.37548997004143,8.4414391504752,8.86229837105499,1.17851434189467,0.569486723196412,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,1.25668024088073,0,0,0,0,5.54225365797844,2.74500361691176,0,3.12883776346098,3.06858548796397,4.36354893575076,3.24482526135515,0,0.124406970610093,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,1.89260953707715,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65596710964597,4.21962071731931,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=491 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:16660574..16660581,+ | |||
|id=chr12:16660574..16660581,+ | |||
|ontology_enrichment_celltype=CL:0002614!1.69e-07!3;CL:0002610!2.03e-07!3;CL:0000117!5.03e-07!23;CL:0000337!5.03e-07!23;CL:0002319!7.32e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,2.40e-10,3;CL:0002610,3.15e-10,3;CL:0000117,4.97e-09,23;CL:0000337,4.97e-09,23;CL:0002319,1.82e-07,43;CL:0000221,3.05e-07,44;CL:0000133,3.05e-07,44;CL:0000878,8.62e-07,2;CL:0000129,8.62e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.69e-30!73;UBERON:0005743!1.69e-30!73;UBERON:0000073!1.97e-29!75;UBERON:0001016!1.97e-29!75;UBERON:0001049!8.78e-25!52;UBERON:0005068!8.78e-25!52;UBERON:0006241!8.78e-25!52;UBERON:0007135!8.78e-25!52;UBERON:0000955!1.38e-24!50;UBERON:0006238!1.38e-24!50;UBERON:0002616!2.55e-23!49;UBERON:0004121!4.07e-19!102;UBERON:0000924!4.07e-19!102;UBERON:0006601!4.07e-19!102;UBERON:0000033!6.00e-18!63;UBERON:0002020!6.70e-18!34;UBERON:0002346!4.38e-16!71;UBERON:0003075!4.38e-16!71;UBERON:0007284!4.38e-16!71;UBERON:0003080!8.40e-15!40;UBERON:0002021!4.17e-14!10;UBERON:0000411!4.17e-14!10;UBERON:0001950!4.17e-14!10;UBERON:0002791!1.51e-13!29;UBERON:0003528!1.51e-13!29;UBERON:0001893!1.51e-13!29;UBERON:0002780!1.77e-13!39;UBERON:0001890!1.77e-13!39;UBERON:0006240!1.77e-13!39;UBERON:0002298!5.16e-13!6;UBERON:0000025!5.55e-12!114;UBERON:0003076!1.83e-11!12;UBERON:0003057!1.83e-11!12;UBERON:0007811!3.55e-11!86;UBERON:0002619!4.03e-11!17;UBERON:0003056!4.07e-11!49;UBERON:0004111!1.24e-10!122;UBERON:0000956!2.19e-10!21;UBERON:0001869!2.19e-10!21;UBERON:0000203!2.19e-10!21;UBERON:0000153!1.29e-09!94;UBERON:0002950!2.10e-09!4;UBERON:0001891!2.10e-09!4;UBERON:0009616!2.10e-09!4;UBERON:0002240!1.03e-07!6;UBERON:0005174!1.03e-07!6;UBERON:0001137!1.03e-07!6;UBERON:0002038!1.69e-07!3;UBERON:0002308!1.69e-07!3;UBERON:0009663!1.69e-07!3;UBERON:0009661!1.69e-07!3;UBERON:0006331!1.69e-07!3;UBERON:0000125!1.69e-07!3;UBERON:0004684!2.03e-07!3;UBERON:0002275!2.03e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.65e-33,54;UBERON:0001017,2.38e-32,73;UBERON:0001016,2.44e-31,75;UBERON:0001049,4.74e-29,52;UBERON:0005068,4.74e-29,52;UBERON:0006241,4.74e-29,52;UBERON:0007135,4.74e-29,52;UBERON:0004121,1.49e-23,95;UBERON:0000924,1.49e-23,95;UBERON:0006601,1.49e-23,95;UBERON:0002616,6.03e-23,46;UBERON:0002346,1.22e-22,64;UBERON:0003075,1.22e-22,64;UBERON:0007284,1.22e-22,64;UBERON:0000955,2.32e-22,47;UBERON:0006238,2.32e-22,47;UBERON:0002020,3.90e-20,34;UBERON:0010371,3.28e-19,73;UBERON:0003080,4.04e-17,40;UBERON:0002021,2.76e-16,10;UBERON:0000411,2.76e-16,10;UBERON:0001950,2.76e-16,10;UBERON:0003528,2.80e-16,29;UBERON:0002791,2.80e-16,29;UBERON:0001893,2.80e-16,29;UBERON:0002780,2.47e-15,39;UBERON:0001890,2.47e-15,39;UBERON:0006240,2.47e-15,39;UBERON:0010314,3.60e-14,92;UBERON:0003076,1.93e-13,12;UBERON:0003057,1.93e-13,12;UBERON:0003056,2.71e-13,49;UBERON:0002950,3.70e-13,4;UBERON:0001891,3.70e-13,4;UBERON:0009616,3.70e-13,4;UBERON:0010286,3.70e-13,4;UBERON:0002619,1.94e-11,17;UBERON:0000956,3.27e-11,21;UBERON:0001869,3.27e-11,21;UBERON:0000203,3.27e-11,21;UBERON:0000025,1.99e-10,114;UBERON:0002038,2.40e-10,3;UBERON:0009663,2.40e-10,3;UBERON:0009661,2.40e-10,3;UBERON:0000125,2.40e-10,3;UBERON:0002308,2.40e-10,3;UBERON:0004684,3.15e-10,3;UBERON:0002275,3.15e-10,3;UBERON:0004111,2.11e-09,122;UBERON:0011216,1.54e-08,194;UBERON:0004733,1.48e-07,6;UBERON:0004732,1.48e-07,6;UBERON:0002028,1.48e-07,6;UBERON:0007277,1.48e-07,6;UBERON:0002240,2.13e-07,6;UBERON:0005174,2.13e-07,6;UBERON:0001137,2.13e-07,6;UBERON:0001896,5.79e-07,2;UBERON:0002298,5.79e-07,2;UBERON:0005290,5.79e-07,2;UBERON:0010096,5.79e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39680088414724,4.99483796918021,0,0,0,2.85650984403804,1.32521124570968,0,0,0,18.7196997698961,5.2351808614927,6.14426133024974,0,0,0,8.37548997004143,8.4414391504752,8.86229837105499,1.17851434189467,0.569486723196412,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,1.25668024088073,0,0,0,0,5.54225365797844,2.74500361691176,0,3.12883776346098,3.06858548796397,4.36354893575076,3.24482526135515,0,0.124406970610093,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,1.89260953707715,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65596710964597,4.21962071731931,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,2.29158205375759,1.3748254587495,2.05524755931193,2.2661816921691,4.05013500139084,2.2516060161211,2.26571204492102,3.10656187051092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:16660574..16660581,+ | |||
}} |
Revision as of 22:34, 12 September 2013
Short description: | p@chr12:16660574..16660581, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:16660574..16660581, + |
Coexpression cluster: | MCL_coexpression_mm9:491 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 2.40e-10 | 3 |
raphe nuclei neuron | 3.15e-10 | 3 |
CNS neuron (sensu Vertebrata) | 4.97e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.97e-09 | 23 |
neural cell | 1.82e-07 | 43 |
ectodermal cell | 3.05e-07 | 44 |
neurectodermal cell | 3.05e-07 | 44 |
central nervous system macrophage | 8.62e-07 | 2 |
microglial cell | 8.62e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.