FFCP PHASE1:Mm9::chr12:71008869..71008876,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=208|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:71008869..71008876,+|id=chr12:71008869..71008876,+|ontology_enrichment_celltype=CL:0000117!2.45e-16!23;CL:0000337!2.45e-16!23;CL:0000540!1.56e-14!33;CL:0000047!1.56e-14!33;CL:0000031!1.56e-14!33;CL:0000404!1.56e-14!33;CL:0000221!4.32e-11!44;CL:0000133!4.32e-11!44;CL:0000393!5.73e-11!39;CL:0000211!5.73e-11!39;CL:0002319!9.16e-11!43;CL:0000055!4.48e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.61e-18,23;CL:0000337,2.61e-18,23;CL:0000540,9.94e-12,33;CL:0000047,9.94e-12,33;CL:0000031,9.94e-12,33;CL:0000404,9.94e-12,33;CL:0000393,2.05e-09,39;CL:0000211,2.05e-09,39;CL:0002319,3.08e-08,43;CL:0000221,5.60e-08,44;CL:0000133,5.60e-08,44;CL:0002614,1.06e-07,3;CL:0002610,1.12e-07,3;CL:0002612,7.32e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.17e-32!71;UBERON:0003075!1.17e-32!71;UBERON:0007284!1.17e-32!71;UBERON:0001017!8.84e-31!73;UBERON:0005743!8.84e-31!73;UBERON:0000073!1.54e-30!75;UBERON:0001016!1.54e-30!75;UBERON:0001049!2.80e-30!52;UBERON:0005068!2.80e-30!52;UBERON:0006241!2.80e-30!52;UBERON:0007135!2.80e-30!52;UBERON:0000033!2.44e-29!63;UBERON:0004121!1.51e-28!102;UBERON:0000924!1.51e-28!102;UBERON:0006601!1.51e-28!102;UBERON:0000955!2.87e-28!50;UBERON:0006238!2.87e-28!50;UBERON:0002616!1.74e-27!49;UBERON:0002020!1.02e-22!34;UBERON:0003056!1.70e-22!49;UBERON:0003080!8.51e-21!40;UBERON:0002780!9.68e-20!39;UBERON:0001890!9.68e-20!39;UBERON:0006240!9.68e-20!39;UBERON:0002791!3.05e-18!29;UBERON:0003528!3.05e-18!29;UBERON:0001893!3.05e-18!29;UBERON:0007811!6.64e-17!86;UBERON:0000153!1.54e-15!94;UBERON:0000956!1.29e-11!21;UBERON:0001869!1.29e-11!21;UBERON:0000203!1.29e-11!21;UBERON:0003076!5.85e-10!12;UBERON:0003057!5.85e-10!12;UBERON:0002619!1.44e-08!17;UBERON:0002021!3.21e-08!10;UBERON:0000411!3.21e-08!10;UBERON:0001950!3.21e-08!10;UBERON:0002420!4.36e-08!8;UBERON:0007245!4.36e-08!8;UBERON:0010009!4.36e-08!8;UBERON:0010011!4.36e-08!8;UBERON:0000454!4.36e-08!8;UBERON:0002298!1.21e-07!6;UBERON:0002240!6.85e-07!6;UBERON:0005174!6.85e-07!6;UBERON:0001137!6.85e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-39,54;UBERON:0001049,5.63e-36,52;UBERON:0005068,5.63e-36,52;UBERON:0006241,5.63e-36,52;UBERON:0007135,5.63e-36,52;UBERON:0002346,6.19e-30,64;UBERON:0003075,6.19e-30,64;UBERON:0007284,6.19e-30,64;UBERON:0001017,1.31e-29,73;UBERON:0002020,1.72e-29,34;UBERON:0001016,1.27e-28,75;UBERON:0002616,9.68e-26,46;UBERON:0010371,2.31e-25,73;UBERON:0000955,4.58e-25,47;UBERON:0006238,4.58e-25,47;UBERON:0004121,1.56e-22,95;UBERON:0000924,1.56e-22,95;UBERON:0006601,1.56e-22,95;UBERON:0003528,4.57e-21,29;UBERON:0002791,4.57e-21,29;UBERON:0001893,4.57e-21,29;UBERON:0003080,2.86e-20,40;UBERON:0010314,1.21e-18,92;UBERON:0002780,1.50e-18,39;UBERON:0001890,1.50e-18,39;UBERON:0006240,1.50e-18,39;UBERON:0003076,1.31e-17,12;UBERON:0003057,1.31e-17,12;UBERON:0003056,2.76e-17,49;UBERON:0000956,1.86e-15,21;UBERON:0001869,1.86e-15,21;UBERON:0000203,1.86e-15,21;UBERON:0002619,5.98e-14,17;UBERON:0002021,2.15e-13,10;UBERON:0000411,2.15e-13,10;UBERON:0001950,2.15e-13,10;UBERON:0002240,5.72e-13,6;UBERON:0005174,5.72e-13,6;UBERON:0001137,5.72e-13,6;UBERON:0000025,1.37e-12,114;UBERON:0004111,2.64e-11,122;UBERON:0001948,1.29e-10,5;UBERON:0002315,1.29e-10,5;UBERON:0002950,4.99e-10,4;UBERON:0001891,4.99e-10,4;UBERON:0009616,4.99e-10,4;UBERON:0010286,4.99e-10,4;UBERON:0002038,1.06e-07,3;UBERON:0009663,1.06e-07,3;UBERON:0009661,1.06e-07,3;UBERON:0000125,1.06e-07,3;UBERON:0002308,1.06e-07,3;UBERON:0004684,1.12e-07,3;UBERON:0002275,1.12e-07,3;UBERON:0002257,7.32e-07,3;UBERON:0002420,9.17e-07,8;UBERON:0007245,9.17e-07,8;UBERON:0010009,9.17e-07,8;UBERON:0010011,9.17e-07,8;UBERON:0000454,9.17e-07,8;UBERON:0004733,9.74e-07,6;UBERON:0004732,9.74e-07,6;UBERON:0002028,9.74e-07,6;UBERON:0007277,9.74e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.933206510776299,0.540023753326763,1.26194976810829,2.85650984403804,1.10434270475807,1.71487118900936,0.287536413054709,0,1.10115880999389,3.31987079021488,3.84016333140609,0.923204014111357,1.64677758484337,1.04182674111352,1.95428099300967,3.37657566019008,2.29197371665215,1.17851434189467,1.70846016958924,1.67759501242771,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,2.63502717310392,2.09446706813455,0,0,0,0,4.04434726393021,0.915001205637253,0.879580464790051,2.9550134432687,2.55715457330331,2.49345653471472,2.10913641988085,0,0,0,0,0,0.459804208866946,1.26043490863744,0.60281927134286,0.272145996605311,0.512454881139399,0.374806898238915,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,2.73376933133365,1.3377599609307,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,2.81308047821288,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0,0.292255857911312,0,0.642642632843614,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0,0,0,0,0,7.32800820289447,0,0,0,0,0,0,0,0,4.1069300540421,3.74439008135225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30162618253588,0.572895513439397,2.57779773515531,3.42541259885321,1.5107877947794,1.35004500046361,2.2516060161211,2.26571204492102,1.55328093525546,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0.64183841918363,0,0.760437899670719,0,0.468207537349412,0.0640251524048693,0.17230640686684,0,0.695305955669133,0.38581844092741,0,0,0,0,0,0.436039249896986,0.376437521661322,0,0.365855945745545,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.464810523557898,0,0.499621155875892,0.233931608445408,0,0,0.220591419119515,0|short_description=p@chr12:71008869..71008876,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=208 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:71008869..71008876,+ | |||
|id=chr12:71008869..71008876,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.45e-16!23;CL:0000337!2.45e-16!23;CL:0000540!1.56e-14!33;CL:0000047!1.56e-14!33;CL:0000031!1.56e-14!33;CL:0000404!1.56e-14!33;CL:0000221!4.32e-11!44;CL:0000133!4.32e-11!44;CL:0000393!5.73e-11!39;CL:0000211!5.73e-11!39;CL:0002319!9.16e-11!43;CL:0000055!4.48e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.61e-18,23;CL:0000337,2.61e-18,23;CL:0000540,9.94e-12,33;CL:0000047,9.94e-12,33;CL:0000031,9.94e-12,33;CL:0000404,9.94e-12,33;CL:0000393,2.05e-09,39;CL:0000211,2.05e-09,39;CL:0002319,3.08e-08,43;CL:0000221,5.60e-08,44;CL:0000133,5.60e-08,44;CL:0002614,1.06e-07,3;CL:0002610,1.12e-07,3;CL:0002612,7.32e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.17e-32!71;UBERON:0003075!1.17e-32!71;UBERON:0007284!1.17e-32!71;UBERON:0001017!8.84e-31!73;UBERON:0005743!8.84e-31!73;UBERON:0000073!1.54e-30!75;UBERON:0001016!1.54e-30!75;UBERON:0001049!2.80e-30!52;UBERON:0005068!2.80e-30!52;UBERON:0006241!2.80e-30!52;UBERON:0007135!2.80e-30!52;UBERON:0000033!2.44e-29!63;UBERON:0004121!1.51e-28!102;UBERON:0000924!1.51e-28!102;UBERON:0006601!1.51e-28!102;UBERON:0000955!2.87e-28!50;UBERON:0006238!2.87e-28!50;UBERON:0002616!1.74e-27!49;UBERON:0002020!1.02e-22!34;UBERON:0003056!1.70e-22!49;UBERON:0003080!8.51e-21!40;UBERON:0002780!9.68e-20!39;UBERON:0001890!9.68e-20!39;UBERON:0006240!9.68e-20!39;UBERON:0002791!3.05e-18!29;UBERON:0003528!3.05e-18!29;UBERON:0001893!3.05e-18!29;UBERON:0007811!6.64e-17!86;UBERON:0000153!1.54e-15!94;UBERON:0000956!1.29e-11!21;UBERON:0001869!1.29e-11!21;UBERON:0000203!1.29e-11!21;UBERON:0003076!5.85e-10!12;UBERON:0003057!5.85e-10!12;UBERON:0002619!1.44e-08!17;UBERON:0002021!3.21e-08!10;UBERON:0000411!3.21e-08!10;UBERON:0001950!3.21e-08!10;UBERON:0002420!4.36e-08!8;UBERON:0007245!4.36e-08!8;UBERON:0010009!4.36e-08!8;UBERON:0010011!4.36e-08!8;UBERON:0000454!4.36e-08!8;UBERON:0002298!1.21e-07!6;UBERON:0002240!6.85e-07!6;UBERON:0005174!6.85e-07!6;UBERON:0001137!6.85e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-39,54;UBERON:0001049,5.63e-36,52;UBERON:0005068,5.63e-36,52;UBERON:0006241,5.63e-36,52;UBERON:0007135,5.63e-36,52;UBERON:0002346,6.19e-30,64;UBERON:0003075,6.19e-30,64;UBERON:0007284,6.19e-30,64;UBERON:0001017,1.31e-29,73;UBERON:0002020,1.72e-29,34;UBERON:0001016,1.27e-28,75;UBERON:0002616,9.68e-26,46;UBERON:0010371,2.31e-25,73;UBERON:0000955,4.58e-25,47;UBERON:0006238,4.58e-25,47;UBERON:0004121,1.56e-22,95;UBERON:0000924,1.56e-22,95;UBERON:0006601,1.56e-22,95;UBERON:0003528,4.57e-21,29;UBERON:0002791,4.57e-21,29;UBERON:0001893,4.57e-21,29;UBERON:0003080,2.86e-20,40;UBERON:0010314,1.21e-18,92;UBERON:0002780,1.50e-18,39;UBERON:0001890,1.50e-18,39;UBERON:0006240,1.50e-18,39;UBERON:0003076,1.31e-17,12;UBERON:0003057,1.31e-17,12;UBERON:0003056,2.76e-17,49;UBERON:0000956,1.86e-15,21;UBERON:0001869,1.86e-15,21;UBERON:0000203,1.86e-15,21;UBERON:0002619,5.98e-14,17;UBERON:0002021,2.15e-13,10;UBERON:0000411,2.15e-13,10;UBERON:0001950,2.15e-13,10;UBERON:0002240,5.72e-13,6;UBERON:0005174,5.72e-13,6;UBERON:0001137,5.72e-13,6;UBERON:0000025,1.37e-12,114;UBERON:0004111,2.64e-11,122;UBERON:0001948,1.29e-10,5;UBERON:0002315,1.29e-10,5;UBERON:0002950,4.99e-10,4;UBERON:0001891,4.99e-10,4;UBERON:0009616,4.99e-10,4;UBERON:0010286,4.99e-10,4;UBERON:0002038,1.06e-07,3;UBERON:0009663,1.06e-07,3;UBERON:0009661,1.06e-07,3;UBERON:0000125,1.06e-07,3;UBERON:0002308,1.06e-07,3;UBERON:0004684,1.12e-07,3;UBERON:0002275,1.12e-07,3;UBERON:0002257,7.32e-07,3;UBERON:0002420,9.17e-07,8;UBERON:0007245,9.17e-07,8;UBERON:0010009,9.17e-07,8;UBERON:0010011,9.17e-07,8;UBERON:0000454,9.17e-07,8;UBERON:0004733,9.74e-07,6;UBERON:0004732,9.74e-07,6;UBERON:0002028,9.74e-07,6;UBERON:0007277,9.74e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.933206510776299,0.540023753326763,1.26194976810829,2.85650984403804,1.10434270475807,1.71487118900936,0.287536413054709,0,1.10115880999389,3.31987079021488,3.84016333140609,0.923204014111357,1.64677758484337,1.04182674111352,1.95428099300967,3.37657566019008,2.29197371665215,1.17851434189467,1.70846016958924,1.67759501242771,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,2.63502717310392,2.09446706813455,0,0,0,0,4.04434726393021,0.915001205637253,0.879580464790051,2.9550134432687,2.55715457330331,2.49345653471472,2.10913641988085,0,0,0,0,0,0.459804208866946,1.26043490863744,0.60281927134286,0.272145996605311,0.512454881139399,0.374806898238915,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,2.73376933133365,1.3377599609307,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,2.81308047821288,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0,0.292255857911312,0,0.642642632843614,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0,0,0,0,0,7.32800820289447,0,0,0,0,0,0,0,0,4.1069300540421,3.74439008135225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30162618253588,0.572895513439397,2.57779773515531,3.42541259885321,1.5107877947794,1.35004500046361,2.2516060161211,2.26571204492102,1.55328093525546,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0.64183841918363,0,0.760437899670719,0,0.468207537349412,0.0640251524048693,0.17230640686684,0,0.695305955669133,0.38581844092741,0,0,0,0,0,0.436039249896986,0.376437521661322,0,0.365855945745545,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.464810523557898,0,0.499621155875892,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p@chr12:71008869..71008876,+ | |||
}} |
Revision as of 23:04, 12 September 2013
Short description: | p@chr12:71008869..71008876, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:71008869..71008876, + |
Coexpression cluster: | MCL_coexpression_mm9:208 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.61e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.61e-18 | 23 |
neuron | 9.94e-12 | 33 |
neuronal stem cell | 9.94e-12 | 33 |
neuroblast | 9.94e-12 | 33 |
electrically signaling cell | 9.94e-12 | 33 |
electrically responsive cell | 2.05e-09 | 39 |
electrically active cell | 2.05e-09 | 39 |
neural cell | 3.08e-08 | 43 |
ectodermal cell | 5.60e-08 | 44 |
neurectodermal cell | 5.60e-08 | 44 |
neuron of the substantia nigra | 1.06e-07 | 3 |
raphe nuclei neuron | 1.12e-07 | 3 |
neuron of the ventral spinal cord | 7.32e-07 | 3 |
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