FFCP PHASE1:Mm9::chr13:100192609..100192628,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=237|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100192609..100192628,-|id=chr13:100192609..100192628,-|ontology_enrichment_celltype=CL:0000117!4.56e-16!23;CL:0000337!4.56e-16!23;CL:0000540!7.10e-11!33;CL:0000047!7.10e-11!33;CL:0000031!7.10e-11!33;CL:0000404!7.10e-11!33;CL:0002319!2.74e-09!43;CL:0000221!7.77e-09!44;CL:0000133!7.77e-09!44;CL:0000393!2.06e-08!39;CL:0000211!2.06e-08!39;CL:0000055!4.01e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.22e-24,23;CL:0000337,3.22e-24,23;CL:0000540,2.23e-15,33;CL:0000047,2.23e-15,33;CL:0000031,2.23e-15,33;CL:0000404,2.23e-15,33;CL:0000393,2.85e-12,39;CL:0000211,2.85e-12,39;CL:0002319,1.08e-10,43;CL:0000221,2.41e-10,44;CL:0000133,2.41e-10,44;CL:0002614,3.87e-07,3;CL:0002610,4.24e-07,3;CL:0002612,4.85e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.03e-26!52;UBERON:0005068!2.03e-26!52;UBERON:0006241!2.03e-26!52;UBERON:0007135!2.03e-26!52;UBERON:0002346!3.48e-26!71;UBERON:0003075!3.48e-26!71;UBERON:0007284!3.48e-26!71;UBERON:0000073!7.51e-26!75;UBERON:0001016!7.51e-26!75;UBERON:0001017!1.42e-25!73;UBERON:0005743!1.42e-25!73;UBERON:0000955!1.17e-24!50;UBERON:0006238!1.17e-24!50;UBERON:0002616!5.98e-24!49;UBERON:0000033!7.07e-24!63;UBERON:0002020!1.31e-23!34;UBERON:0004121!2.19e-23!102;UBERON:0000924!2.19e-23!102;UBERON:0006601!2.19e-23!102;UBERON:0003056!9.28e-23!49;UBERON:0003080!1.23e-20!40;UBERON:0002780!7.53e-20!39;UBERON:0001890!7.53e-20!39;UBERON:0006240!7.53e-20!39;UBERON:0002791!2.45e-19!29;UBERON:0003528!2.45e-19!29;UBERON:0001893!2.45e-19!29;UBERON:0007811!1.61e-13!86;UBERON:0000956!2.85e-13!21;UBERON:0001869!2.85e-13!21;UBERON:0000203!2.85e-13!21;UBERON:0000153!8.28e-12!94;UBERON:0002619!5.16e-11!17;UBERON:0002021!3.29e-09!10;UBERON:0000411!3.29e-09!10;UBERON:0001950!3.29e-09!10;UBERON:0002420!2.58e-07!8;UBERON:0007245!2.58e-07!8;UBERON:0010009!2.58e-07!8;UBERON:0010011!2.58e-07!8;UBERON:0000454!2.58e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.44e-37,54;UBERON:0002020,1.21e-35,34;UBERON:0001017,1.35e-34,73;UBERON:0001016,2.07e-33,75;UBERON:0001049,2.52e-33,52;UBERON:0005068,2.52e-33,52;UBERON:0006241,2.52e-33,52;UBERON:0007135,2.52e-33,52;UBERON:0002346,4.00e-27,64;UBERON:0003075,4.00e-27,64;UBERON:0007284,4.00e-27,64;UBERON:0003528,5.77e-27,29;UBERON:0002791,5.77e-27,29;UBERON:0001893,5.77e-27,29;UBERON:0004121,1.04e-25,95;UBERON:0000924,1.04e-25,95;UBERON:0006601,1.04e-25,95;UBERON:0000955,3.09e-25,47;UBERON:0006238,3.09e-25,47;UBERON:0002616,5.65e-24,46;UBERON:0003080,7.71e-24,40;UBERON:0010371,1.07e-22,73;UBERON:0002780,2.12e-22,39;UBERON:0001890,2.12e-22,39;UBERON:0006240,2.12e-22,39;UBERON:0003056,8.48e-20,49;UBERON:0002021,2.79e-18,10;UBERON:0000411,2.79e-18,10;UBERON:0001950,2.79e-18,10;UBERON:0000956,5.74e-17,21;UBERON:0001869,5.74e-17,21;UBERON:0000203,5.74e-17,21;UBERON:0002619,2.20e-16,17;UBERON:0010314,3.30e-16,92;UBERON:0002240,6.27e-12,6;UBERON:0005174,6.27e-12,6;UBERON:0001137,6.27e-12,6;UBERON:0002420,2.34e-11,8;UBERON:0007245,2.34e-11,8;UBERON:0010009,2.34e-11,8;UBERON:0010011,2.34e-11,8;UBERON:0000454,2.34e-11,8;UBERON:0000025,1.40e-10,114;UBERON:0001948,3.24e-10,5;UBERON:0002315,3.24e-10,5;UBERON:0003076,1.03e-09,12;UBERON:0003057,1.03e-09,12;UBERON:0004111,2.38e-09,122;UBERON:0002950,9.83e-09,4;UBERON:0001891,9.83e-09,4;UBERON:0009616,9.83e-09,4;UBERON:0010286,9.83e-09,4;UBERON:0002038,3.87e-07,3;UBERON:0009663,3.87e-07,3;UBERON:0009661,3.87e-07,3;UBERON:0000125,3.87e-07,3;UBERON:0002308,3.87e-07,3;UBERON:0004684,4.24e-07,3;UBERON:0002275,4.24e-07,3;UBERON:0002257,4.85e-07,3;UBERON:0011216,6.36e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.972149495371417,0.139986421625363,0,0,0,0,0,0.286533439938757,0,2.22548106945558,11.6378015439847,5.70448263155561,0.338844532069132,0,0,0,0,0,0,0.725827286159344,0.945041568321835,1.89292465216244,3.71346279724945,4.63823935998388,0.489963196859816,1.0543001812006,0,12.1127469099328,5.74593021383345,5.83704826373725,0.923204014111357,4.94033275453012,3.12548022334056,6.70039197603314,6.75315132038016,6.1119299110724,20.0347438122094,11.3897344639282,3.16879057903011,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,4.19413790333504,2.74500361691176,2.51308704225729,2.9550134432687,1.02286182932132,2.28566849015516,2.27137768294861,0.203678727700633,0.124406970610093,0.505445516867349,0.210441855886474,0.650602214813519,0,0.180062129805349,0.60281927134286,0.408218994907967,0.896796041993948,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0.439100230582101,0,1.89260953707715,4.21908910755066,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10092241953609,4.92289083687253,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0.356737635204141,0.493647061806363,0,0.469343416127421,0,0,0,0,0.0603129249281559,0,0,0,5.56275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0,0.337912250981556,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0.221985953374065,0,0,0.19318959403219,0,0,0,0,7.90652579663893,3.22227665555024,8.02053718815155,8.76451229952807,2.74033007908257,6.0431511791176,4.05013500139084,4.05289082901798,2.26571204492102,5.1776031175182,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0.551530525350042,0.888986911206461,0,0.320919209591815,0.758091635291392,1.01391719956096,1.69763707247469,0.37456602987953,0.512201219238954,0.516919220600519,0.952587382566147,0.463537303779422,0.964546102318525,1.23625770240992,0.735994600671987,0.685738504770831,0.887379030796687,0.953744759789284,1.0174249164263,0.658765662907314,0.676916863133412,1.09756783723664,0.789209134313529,0.814824683075171,1.12228454331548,0.711810108745045,0.788035859004508,1.22769312950907,0.77468420592983,0,0.749431733813838,0,0.429742108096597,0.191288332068843,0,0|short_description=p@chr13:100192609..100192628,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=237 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:100192609..100192628,- | |||
|id=chr13:100192609..100192628,- | |||
|ontology_enrichment_celltype=CL:0000117!4.56e-16!23;CL:0000337!4.56e-16!23;CL:0000540!7.10e-11!33;CL:0000047!7.10e-11!33;CL:0000031!7.10e-11!33;CL:0000404!7.10e-11!33;CL:0002319!2.74e-09!43;CL:0000221!7.77e-09!44;CL:0000133!7.77e-09!44;CL:0000393!2.06e-08!39;CL:0000211!2.06e-08!39;CL:0000055!4.01e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.22e-24,23;CL:0000337,3.22e-24,23;CL:0000540,2.23e-15,33;CL:0000047,2.23e-15,33;CL:0000031,2.23e-15,33;CL:0000404,2.23e-15,33;CL:0000393,2.85e-12,39;CL:0000211,2.85e-12,39;CL:0002319,1.08e-10,43;CL:0000221,2.41e-10,44;CL:0000133,2.41e-10,44;CL:0002614,3.87e-07,3;CL:0002610,4.24e-07,3;CL:0002612,4.85e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.03e-26!52;UBERON:0005068!2.03e-26!52;UBERON:0006241!2.03e-26!52;UBERON:0007135!2.03e-26!52;UBERON:0002346!3.48e-26!71;UBERON:0003075!3.48e-26!71;UBERON:0007284!3.48e-26!71;UBERON:0000073!7.51e-26!75;UBERON:0001016!7.51e-26!75;UBERON:0001017!1.42e-25!73;UBERON:0005743!1.42e-25!73;UBERON:0000955!1.17e-24!50;UBERON:0006238!1.17e-24!50;UBERON:0002616!5.98e-24!49;UBERON:0000033!7.07e-24!63;UBERON:0002020!1.31e-23!34;UBERON:0004121!2.19e-23!102;UBERON:0000924!2.19e-23!102;UBERON:0006601!2.19e-23!102;UBERON:0003056!9.28e-23!49;UBERON:0003080!1.23e-20!40;UBERON:0002780!7.53e-20!39;UBERON:0001890!7.53e-20!39;UBERON:0006240!7.53e-20!39;UBERON:0002791!2.45e-19!29;UBERON:0003528!2.45e-19!29;UBERON:0001893!2.45e-19!29;UBERON:0007811!1.61e-13!86;UBERON:0000956!2.85e-13!21;UBERON:0001869!2.85e-13!21;UBERON:0000203!2.85e-13!21;UBERON:0000153!8.28e-12!94;UBERON:0002619!5.16e-11!17;UBERON:0002021!3.29e-09!10;UBERON:0000411!3.29e-09!10;UBERON:0001950!3.29e-09!10;UBERON:0002420!2.58e-07!8;UBERON:0007245!2.58e-07!8;UBERON:0010009!2.58e-07!8;UBERON:0010011!2.58e-07!8;UBERON:0000454!2.58e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.44e-37,54;UBERON:0002020,1.21e-35,34;UBERON:0001017,1.35e-34,73;UBERON:0001016,2.07e-33,75;UBERON:0001049,2.52e-33,52;UBERON:0005068,2.52e-33,52;UBERON:0006241,2.52e-33,52;UBERON:0007135,2.52e-33,52;UBERON:0002346,4.00e-27,64;UBERON:0003075,4.00e-27,64;UBERON:0007284,4.00e-27,64;UBERON:0003528,5.77e-27,29;UBERON:0002791,5.77e-27,29;UBERON:0001893,5.77e-27,29;UBERON:0004121,1.04e-25,95;UBERON:0000924,1.04e-25,95;UBERON:0006601,1.04e-25,95;UBERON:0000955,3.09e-25,47;UBERON:0006238,3.09e-25,47;UBERON:0002616,5.65e-24,46;UBERON:0003080,7.71e-24,40;UBERON:0010371,1.07e-22,73;UBERON:0002780,2.12e-22,39;UBERON:0001890,2.12e-22,39;UBERON:0006240,2.12e-22,39;UBERON:0003056,8.48e-20,49;UBERON:0002021,2.79e-18,10;UBERON:0000411,2.79e-18,10;UBERON:0001950,2.79e-18,10;UBERON:0000956,5.74e-17,21;UBERON:0001869,5.74e-17,21;UBERON:0000203,5.74e-17,21;UBERON:0002619,2.20e-16,17;UBERON:0010314,3.30e-16,92;UBERON:0002240,6.27e-12,6;UBERON:0005174,6.27e-12,6;UBERON:0001137,6.27e-12,6;UBERON:0002420,2.34e-11,8;UBERON:0007245,2.34e-11,8;UBERON:0010009,2.34e-11,8;UBERON:0010011,2.34e-11,8;UBERON:0000454,2.34e-11,8;UBERON:0000025,1.40e-10,114;UBERON:0001948,3.24e-10,5;UBERON:0002315,3.24e-10,5;UBERON:0003076,1.03e-09,12;UBERON:0003057,1.03e-09,12;UBERON:0004111,2.38e-09,122;UBERON:0002950,9.83e-09,4;UBERON:0001891,9.83e-09,4;UBERON:0009616,9.83e-09,4;UBERON:0010286,9.83e-09,4;UBERON:0002038,3.87e-07,3;UBERON:0009663,3.87e-07,3;UBERON:0009661,3.87e-07,3;UBERON:0000125,3.87e-07,3;UBERON:0002308,3.87e-07,3;UBERON:0004684,4.24e-07,3;UBERON:0002275,4.24e-07,3;UBERON:0002257,4.85e-07,3;UBERON:0011216,6.36e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.972149495371417,0.139986421625363,0,0,0,0,0,0.286533439938757,0,2.22548106945558,11.6378015439847,5.70448263155561,0.338844532069132,0,0,0,0,0,0,0.725827286159344,0.945041568321835,1.89292465216244,3.71346279724945,4.63823935998388,0.489963196859816,1.0543001812006,0,12.1127469099328,5.74593021383345,5.83704826373725,0.923204014111357,4.94033275453012,3.12548022334056,6.70039197603314,6.75315132038016,6.1119299110724,20.0347438122094,11.3897344639282,3.16879057903011,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,4.19413790333504,2.74500361691176,2.51308704225729,2.9550134432687,1.02286182932132,2.28566849015516,2.27137768294861,0.203678727700633,0.124406970610093,0.505445516867349,0.210441855886474,0.650602214813519,0,0.180062129805349,0.60281927134286,0.408218994907967,0.896796041993948,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0.439100230582101,0,1.89260953707715,4.21908910755066,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10092241953609,4.92289083687253,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0.356737635204141,0.493647061806363,0,0.469343416127421,0,0,0,0,0.0603129249281559,0,0,0,5.56275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0,0.337912250981556,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0.221985953374065,0,0,0.19318959403219,0,0,0,0,7.90652579663893,3.22227665555024,8.02053718815155,8.76451229952807,2.74033007908257,6.0431511791176,4.05013500139084,4.05289082901798,2.26571204492102,5.1776031175182,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0.551530525350042,0.888986911206461,0,0.320919209591815,0.758091635291392,1.01391719956096,1.69763707247469,0.37456602987953,0.512201219238954,0.516919220600519,0.952587382566147,0.463537303779422,0.964546102318525,1.23625770240992,0.735994600671987,0.685738504770831,0.887379030796687,0.953744759789284,1.0174249164263,0.658765662907314,0.676916863133412,1.09756783723664,0.789209134313529,0.814824683075171,1.12228454331548,0.711810108745045,0.788035859004508,1.22769312950907,0.77468420592983,0,0.749431733813838,0,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p@chr13:100192609..100192628,- | |||
}} |
Revision as of 23:39, 12 September 2013
Short description: | p@chr13:100192609..100192628, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100192609..100192628, - |
Coexpression cluster: | MCL_coexpression_mm9:237 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.22e-24 | 23 |
neuroblast (sensu Vertebrata) | 3.22e-24 | 23 |
neuron | 2.23e-15 | 33 |
neuronal stem cell | 2.23e-15 | 33 |
neuroblast | 2.23e-15 | 33 |
electrically signaling cell | 2.23e-15 | 33 |
electrically responsive cell | 2.85e-12 | 39 |
electrically active cell | 2.85e-12 | 39 |
neural cell | 1.08e-10 | 43 |
ectodermal cell | 2.41e-10 | 44 |
neurectodermal cell | 2.41e-10 | 44 |
neuron of the substantia nigra | 3.87e-07 | 3 |
raphe nuclei neuron | 4.24e-07 | 3 |
neuron of the ventral spinal cord | 4.85e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.