FFCP PHASE1:Mm9::chr15:37721921..37721943,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=52589|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=50bp_to_ENSMUST00000123317_5end|description=CAGE_peak_5_at_Ncald_5end|id=chr15:37721921..37721943,-|ontology_enrichment_celltype=CL:0000117!6.59e-11!23;CL:0000337!6.59e-11!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.63e-12,23;CL:0000337,4.63e-12,23;CL:0000540,4.53e-07,33;CL:0000047,4.53e-07,33;CL:0000031,4.53e-07,33;CL:0000404,4.53e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.24e-21!52;UBERON:0005068!2.24e-21!52;UBERON:0006241!2.24e-21!52;UBERON:0007135!2.24e-21!52;UBERON:0000955!2.96e-20!50;UBERON:0006238!2.96e-20!50;UBERON:0002616!1.08e-19!49;UBERON:0000033!5.51e-19!63;UBERON:0007811!9.19e-18!86;UBERON:0000153!1.68e-17!94;UBERON:0001017!6.59e-17!73;UBERON:0005743!6.59e-17!73;UBERON:0002346!2.71e-16!71;UBERON:0003075!2.71e-16!71;UBERON:0007284!2.71e-16!71;UBERON:0003056!2.97e-16!49;UBERON:0003080!5.42e-16!40;UBERON:0000073!6.01e-16!75;UBERON:0001016!6.01e-16!75;UBERON:0002020!1.22e-15!34;UBERON:0002780!2.87e-15!39;UBERON:0001890!2.87e-15!39;UBERON:0006240!2.87e-15!39;UBERON:0002791!1.10e-12!29;UBERON:0003528!1.10e-12!29;UBERON:0001893!1.10e-12!29;UBERON:0004121!3.29e-12!102;UBERON:0000924!3.29e-12!102;UBERON:0006601!3.29e-12!102;UBERON:0002021!2.42e-08!10;UBERON:0000411!2.42e-08!10;UBERON:0001950!2.42e-08!10;UBERON:0000956!2.68e-08!21;UBERON:0001869!2.68e-08!21;UBERON:0000203!2.68e-08!21;UBERON:0002619!1.74e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.00e-36,54;UBERON:0001049,2.64e-33,52;UBERON:0005068,2.64e-33,52;UBERON:0006241,2.64e-33,52;UBERON:0007135,2.64e-33,52;UBERON:0001017,2.22e-29,73;UBERON:0001016,3.12e-28,75;UBERON:0000955,1.84e-27,47;UBERON:0006238,1.84e-27,47;UBERON:0002616,2.03e-26,46;UBERON:0002346,9.07e-25,64;UBERON:0003075,9.07e-25,64;UBERON:0007284,9.07e-25,64;UBERON:0002020,8.79e-24,34;UBERON:0003080,1.58e-23,40;UBERON:0002780,3.49e-22,39;UBERON:0001890,3.49e-22,39;UBERON:0006240,3.49e-22,39;UBERON:0010371,3.08e-20,73;UBERON:0004121,1.87e-19,95;UBERON:0000924,1.87e-19,95;UBERON:0006601,1.87e-19,95;UBERON:0003528,3.71e-18,29;UBERON:0002791,3.71e-18,29;UBERON:0001893,3.71e-18,29;UBERON:0003056,1.62e-17,49;UBERON:0002021,3.29e-15,10;UBERON:0000411,3.29e-15,10;UBERON:0001950,3.29e-15,10;UBERON:0010314,1.17e-13,92;UBERON:0002619,3.73e-11,17;UBERON:0002420,3.12e-10,8;UBERON:0007245,3.12e-10,8;UBERON:0010009,3.12e-10,8;UBERON:0010011,3.12e-10,8;UBERON:0000454,3.12e-10,8;UBERON:0000956,4.69e-10,21;UBERON:0001869,4.69e-10,21;UBERON:0000203,4.69e-10,21;UBERON:0003076,4.92e-10,12;UBERON:0003057,4.92e-10,12;UBERON:0000025,1.66e-09,114;UBERON:0004111,3.53e-08,122;UBERON:0002240,4.51e-08,6;UBERON:0005174,4.51e-08,6;UBERON:0001137,4.51e-08,6;UBERON:0001948,3.50e-07,5;UBERON:0002315,3.50e-07,5;UBERON:0011216,4.47e-07,194|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.174840804837995,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,1.02051948181284,0.297872853602656,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.872100625521786,0,0,0.279972843250725,0,0,0,0,0,0,0,2.02316460859598,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.945041568321835,0.210324961351382,5.42736870367227,3.3130281142742,0.857435594504678,0.575072826109418,0.919218786610021,3.30347642998166,5.87361755191863,6.45147439676223,2.2420668914133,2.92760459527711,2.08365348222704,5.02529398202486,5.6276261003168,5.95913166329559,3.53554302568401,4.41352210477219,3.54158947068071,0,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.470354828542819,0,0,0.433798070759735,0,1.13236794963186,0.220841518460394,0,0,2.34224637609238,2.51336048176146,0.255457055208591,0,0,0,10.7849260371472,7.77751024791665,1.25654352112864,9.38651329038293,9.46147192122223,9.14267396062064,6.00292673350703,0.509196819251581,0.746441823660558,1.0108910337347,0.210441855886474,0.390361328888111,0.229902104433473,0.360124259610698,0.753524089178575,0.816437989815934,0.768682321709099,0.843315521037559,0.776110112217047,0.215567992932842,0.378212160335639,0.351902248327898,0.876782929710299,1.11218899690239,0,0.205782136407943,0.398068533636986,0,0,0,0.414251545071004,0.938104239924385,0.180062061461015,0.473489471170421,0.393528463494808,0.154267112887378,0,0,0,0.329119699826961,0.492502392237286,0.324275238183423,0,0,0.268412837520744,3.99550902271842,2.36680608472354,0,0,0,0,0.257734922644187,0.605050573870028,0.22237804384487,0.380451252225118,0,0.164698954724011,0.754005626400808,0.198956472041151,0.58489226135736,0,0.216138049874694,0.199141273254367,0.379335801906163,0.799739588268102,0,0.814605311381257,1.16371492300575,0.771494018793504,0.948548056863859,0.442830443938806,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,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| ||
|EntrezGene=52589 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=50bp_to_ENSMUST00000123317_5end | |||
|description=CAGE_peak_5_at_Ncald_5end | |||
|id=chr15:37721921..37721943,- | |||
|ontology_enrichment_celltype=CL:0000117!6.59e-11!23;CL:0000337!6.59e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.63e-12,23;CL:0000337,4.63e-12,23;CL:0000540,4.53e-07,33;CL:0000047,4.53e-07,33;CL:0000031,4.53e-07,33;CL:0000404,4.53e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.24e-21!52;UBERON:0005068!2.24e-21!52;UBERON:0006241!2.24e-21!52;UBERON:0007135!2.24e-21!52;UBERON:0000955!2.96e-20!50;UBERON:0006238!2.96e-20!50;UBERON:0002616!1.08e-19!49;UBERON:0000033!5.51e-19!63;UBERON:0007811!9.19e-18!86;UBERON:0000153!1.68e-17!94;UBERON:0001017!6.59e-17!73;UBERON:0005743!6.59e-17!73;UBERON:0002346!2.71e-16!71;UBERON:0003075!2.71e-16!71;UBERON:0007284!2.71e-16!71;UBERON:0003056!2.97e-16!49;UBERON:0003080!5.42e-16!40;UBERON:0000073!6.01e-16!75;UBERON:0001016!6.01e-16!75;UBERON:0002020!1.22e-15!34;UBERON:0002780!2.87e-15!39;UBERON:0001890!2.87e-15!39;UBERON:0006240!2.87e-15!39;UBERON:0002791!1.10e-12!29;UBERON:0003528!1.10e-12!29;UBERON:0001893!1.10e-12!29;UBERON:0004121!3.29e-12!102;UBERON:0000924!3.29e-12!102;UBERON:0006601!3.29e-12!102;UBERON:0002021!2.42e-08!10;UBERON:0000411!2.42e-08!10;UBERON:0001950!2.42e-08!10;UBERON:0000956!2.68e-08!21;UBERON:0001869!2.68e-08!21;UBERON:0000203!2.68e-08!21;UBERON:0002619!1.74e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.00e-36,54;UBERON:0001049,2.64e-33,52;UBERON:0005068,2.64e-33,52;UBERON:0006241,2.64e-33,52;UBERON:0007135,2.64e-33,52;UBERON:0001017,2.22e-29,73;UBERON:0001016,3.12e-28,75;UBERON:0000955,1.84e-27,47;UBERON:0006238,1.84e-27,47;UBERON:0002616,2.03e-26,46;UBERON:0002346,9.07e-25,64;UBERON:0003075,9.07e-25,64;UBERON:0007284,9.07e-25,64;UBERON:0002020,8.79e-24,34;UBERON:0003080,1.58e-23,40;UBERON:0002780,3.49e-22,39;UBERON:0001890,3.49e-22,39;UBERON:0006240,3.49e-22,39;UBERON:0010371,3.08e-20,73;UBERON:0004121,1.87e-19,95;UBERON:0000924,1.87e-19,95;UBERON:0006601,1.87e-19,95;UBERON:0003528,3.71e-18,29;UBERON:0002791,3.71e-18,29;UBERON:0001893,3.71e-18,29;UBERON:0003056,1.62e-17,49;UBERON:0002021,3.29e-15,10;UBERON:0000411,3.29e-15,10;UBERON:0001950,3.29e-15,10;UBERON:0010314,1.17e-13,92;UBERON:0002619,3.73e-11,17;UBERON:0002420,3.12e-10,8;UBERON:0007245,3.12e-10,8;UBERON:0010009,3.12e-10,8;UBERON:0010011,3.12e-10,8;UBERON:0000454,3.12e-10,8;UBERON:0000956,4.69e-10,21;UBERON:0001869,4.69e-10,21;UBERON:0000203,4.69e-10,21;UBERON:0003076,4.92e-10,12;UBERON:0003057,4.92e-10,12;UBERON:0000025,1.66e-09,114;UBERON:0004111,3.53e-08,122;UBERON:0002240,4.51e-08,6;UBERON:0005174,4.51e-08,6;UBERON:0001137,4.51e-08,6;UBERON:0001948,3.50e-07,5;UBERON:0002315,3.50e-07,5;UBERON:0011216,4.47e-07,194 | |||
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|short_description=p5@Ncald | |||
}} |
Revision as of 10:27, 13 September 2013
Short description: | p5@Ncald |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ncald_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 50bp_to_ENSMUST00000123317_5end |
EntrezGene: | Ncald |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.63e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.63e-12 | 23 |
neuron | 4.53e-07 | 33 |
neuronal stem cell | 4.53e-07 | 33 |
neuroblast | 4.53e-07 | 33 |
electrically signaling cell | 4.53e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.