FFCP PHASE1:Mm9::chr18:38114780..38114789,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=225392|HGNC=|MCL_coexpression_id=1|UniProt=Q8BRJ3,Q8CFT0|association_with_transcript=-423bp_to_ENSMUST00000070709,NM_153793,uc008erm.2,uc008ern.2_5end|description=CAGE_peak_6_at_Rell2_5end|id=chr18:38114780..38114789,+|ontology_enrichment_celltype=CL:0000117!2.70e-10!23;CL:0000337!2.70e-10!23;CL:0000540!1.48e-09!33;CL:0000047!1.48e-09!33;CL:0000031!1.48e-09!33;CL:0000404!1.48e-09!33;CL:0000221!2.54e-09!44;CL:0000133!2.54e-09!44;CL:0002319!6.03e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.37e-15,23;CL:0000337,3.37e-15,23;CL:0002610,1.20e-10,3;CL:0002614,2.02e-10,3;CL:0000540,5.73e-10,33;CL:0000047,5.73e-10,33;CL:0000031,5.73e-10,33;CL:0000404,5.73e-10,33;CL:0002319,1.47e-08,43;CL:0000221,2.60e-08,44;CL:0000133,2.60e-08,44;CL:0000393,4.02e-08,39;CL:0000211,4.02e-08,39;CL:0002611,1.69e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.00e-19!75;UBERON:0001016!2.00e-19!75;UBERON:0001017!2.69e-19!73;UBERON:0005743!2.69e-19!73;UBERON:0001049!3.54e-14!52;UBERON:0005068!3.54e-14!52;UBERON:0006241!3.54e-14!52;UBERON:0007135!3.54e-14!52;UBERON:0000955!6.81e-13!50;UBERON:0006238!6.81e-13!50;UBERON:0004121!1.09e-12!102;UBERON:0000924!1.09e-12!102;UBERON:0006601!1.09e-12!102;UBERON:0002616!3.10e-12!49;UBERON:0002020!1.34e-11!34;UBERON:0000033!8.16e-11!63;UBERON:0002346!3.27e-10!71;UBERON:0003075!3.27e-10!71;UBERON:0007284!3.27e-10!71;UBERON:0007811!3.55e-09!86;UBERON:0003080!3.85e-09!40;UBERON:0002780!1.64e-08!39;UBERON:0001890!1.64e-08!39;UBERON:0006240!1.64e-08!39;UBERON:0002791!2.43e-08!29;UBERON:0003528!2.43e-08!29;UBERON:0001893!2.43e-08!29;UBERON:0000153!2.54e-08!94;UBERON:0003056!1.59e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.17e-28,73;UBERON:0000073,1.52e-27,54;UBERON:0001016,5.98e-27,75;UBERON:0001049,1.75e-23,52;UBERON:0005068,1.75e-23,52;UBERON:0006241,1.75e-23,52;UBERON:0007135,1.75e-23,52;UBERON:0004121,2.70e-20,95;UBERON:0000924,2.70e-20,95;UBERON:0006601,2.70e-20,95;UBERON:0002346,2.65e-18,64;UBERON:0003075,2.65e-18,64;UBERON:0007284,2.65e-18,64;UBERON:0002020,5.77e-18,34;UBERON:0000955,2.17e-16,47;UBERON:0006238,2.17e-16,47;UBERON:0010371,1.56e-15,73;UBERON:0002616,1.06e-14,46;UBERON:0002240,9.62e-14,6;UBERON:0005174,9.62e-14,6;UBERON:0001137,9.62e-14,6;UBERON:0002950,1.58e-13,4;UBERON:0001891,1.58e-13,4;UBERON:0009616,1.58e-13,4;UBERON:0010286,1.58e-13,4;UBERON:0003076,4.52e-13,12;UBERON:0003057,4.52e-13,12;UBERON:0003080,9.44e-13,40;UBERON:0010314,1.85e-11,92;UBERON:0002780,4.14e-11,39;UBERON:0001890,4.14e-11,39;UBERON:0006240,4.14e-11,39;UBERON:0003528,4.68e-11,29;UBERON:0002791,4.68e-11,29;UBERON:0001893,4.68e-11,29;UBERON:0002021,9.15e-11,10;UBERON:0000411,9.15e-11,10;UBERON:0001950,9.15e-11,10;UBERON:0001948,1.09e-10,5;UBERON:0002315,1.09e-10,5;UBERON:0004684,1.20e-10,3;UBERON:0002275,1.20e-10,3;UBERON:0002038,2.02e-10,3;UBERON:0009663,2.02e-10,3;UBERON:0009661,2.02e-10,3;UBERON:0000125,2.02e-10,3;UBERON:0002308,2.02e-10,3;UBERON:0003056,6.62e-10,49;UBERON:0000025,1.32e-09,114;UBERON:0004111,1.09e-08,122;UBERON:0011216,1.97e-08,194;UBERON:0000956,3.02e-08,21;UBERON:0001869,3.02e-08,21;UBERON:0000203,3.02e-08,21;UBERON:0001896,3.68e-08,2;UBERON:0002298,3.68e-08,2;UBERON:0005290,3.68e-08,2;UBERON:0010096,3.68e-08,2;UBERON:0002619,4.55e-08,17;UBERON:0002256,1.69e-07,2|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0,0.467225281191051,0.387369970324729,0.985521055061667,0.936258105287974,0.34243593645101,0.239316476986009,0.342401459862411,0.611942816932982,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0.7813353445238,0,0,0,0.485510353031154,0,0,0,0,0,0,0.58328969722285,0.139986421625363,1.43752564364972,0.167782606057736,0.725362142011344,0.672187598284928,0,0,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.270011876663381,0,3.14216082844184,1.54607978666129,0.61245399607477,0.0958454710182364,0,2.20231761998777,2.042997409363,1.99688493233117,0.263772575460388,0.823388792421687,0,1.67509799400829,2.25105044012672,1.98637722109853,2.06240009831567,1.70846016958924,0.931997229126503,0.075726193333184,0.151143120213571,3.18850937571846,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0.479260498023681,0.599902730993408,0.127070227073065,2.24685959107234,0.915001205637253,0.628271760564322,1.56441888173049,0.767146371990992,3.1168206683934,1.46017136760982,0,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0.384341160854549,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.92614151141356,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,3.85321415970701,2.57865710502847,0,0,0.315508219416257,0,0.646270193198397,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,1.92792789853084,0.141940085208269,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0.120625849856312,0,0,0,2.78137953015765,0,0,0,0,0,0,0.339956859987711,0.979660166265606,0.276399947608848,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.747582730219894,0.330916980914195,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0.419437377702843,0.483168241652012,0.576060012515731,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0.221985953374065,0,0.167884616364078,0,0,0.183151624267265,0,0,1.6942555278512,1.84130094602871,0,2.06223818812425,0,1.5107877947794,0.675022500231806,1.80128481289688,0,1.55328093525546,0.207574695168353,0,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0,0,0.169229215783353,0.182927972872773,0.526139422875686,0,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.701794825336225,0.214871054048298,0,0,0.463735671240843|short_description=p6@Rell2}} | ||
|EntrezGene=225392 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BRJ3,Q8CFT0 | |||
|association_with_transcript=-423bp_to_ENSMUST00000070709,NM_153793,uc008erm.2,uc008ern.2_5end | |||
|description=CAGE_peak_6_at_Rell2_5end | |||
|id=chr18:38114780..38114789,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.70e-10!23;CL:0000337!2.70e-10!23;CL:0000540!1.48e-09!33;CL:0000047!1.48e-09!33;CL:0000031!1.48e-09!33;CL:0000404!1.48e-09!33;CL:0000221!2.54e-09!44;CL:0000133!2.54e-09!44;CL:0002319!6.03e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.37e-15,23;CL:0000337,3.37e-15,23;CL:0002610,1.20e-10,3;CL:0002614,2.02e-10,3;CL:0000540,5.73e-10,33;CL:0000047,5.73e-10,33;CL:0000031,5.73e-10,33;CL:0000404,5.73e-10,33;CL:0002319,1.47e-08,43;CL:0000221,2.60e-08,44;CL:0000133,2.60e-08,44;CL:0000393,4.02e-08,39;CL:0000211,4.02e-08,39;CL:0002611,1.69e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.00e-19!75;UBERON:0001016!2.00e-19!75;UBERON:0001017!2.69e-19!73;UBERON:0005743!2.69e-19!73;UBERON:0001049!3.54e-14!52;UBERON:0005068!3.54e-14!52;UBERON:0006241!3.54e-14!52;UBERON:0007135!3.54e-14!52;UBERON:0000955!6.81e-13!50;UBERON:0006238!6.81e-13!50;UBERON:0004121!1.09e-12!102;UBERON:0000924!1.09e-12!102;UBERON:0006601!1.09e-12!102;UBERON:0002616!3.10e-12!49;UBERON:0002020!1.34e-11!34;UBERON:0000033!8.16e-11!63;UBERON:0002346!3.27e-10!71;UBERON:0003075!3.27e-10!71;UBERON:0007284!3.27e-10!71;UBERON:0007811!3.55e-09!86;UBERON:0003080!3.85e-09!40;UBERON:0002780!1.64e-08!39;UBERON:0001890!1.64e-08!39;UBERON:0006240!1.64e-08!39;UBERON:0002791!2.43e-08!29;UBERON:0003528!2.43e-08!29;UBERON:0001893!2.43e-08!29;UBERON:0000153!2.54e-08!94;UBERON:0003056!1.59e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.17e-28,73;UBERON:0000073,1.52e-27,54;UBERON:0001016,5.98e-27,75;UBERON:0001049,1.75e-23,52;UBERON:0005068,1.75e-23,52;UBERON:0006241,1.75e-23,52;UBERON:0007135,1.75e-23,52;UBERON:0004121,2.70e-20,95;UBERON:0000924,2.70e-20,95;UBERON:0006601,2.70e-20,95;UBERON:0002346,2.65e-18,64;UBERON:0003075,2.65e-18,64;UBERON:0007284,2.65e-18,64;UBERON:0002020,5.77e-18,34;UBERON:0000955,2.17e-16,47;UBERON:0006238,2.17e-16,47;UBERON:0010371,1.56e-15,73;UBERON:0002616,1.06e-14,46;UBERON:0002240,9.62e-14,6;UBERON:0005174,9.62e-14,6;UBERON:0001137,9.62e-14,6;UBERON:0002950,1.58e-13,4;UBERON:0001891,1.58e-13,4;UBERON:0009616,1.58e-13,4;UBERON:0010286,1.58e-13,4;UBERON:0003076,4.52e-13,12;UBERON:0003057,4.52e-13,12;UBERON:0003080,9.44e-13,40;UBERON:0010314,1.85e-11,92;UBERON:0002780,4.14e-11,39;UBERON:0001890,4.14e-11,39;UBERON:0006240,4.14e-11,39;UBERON:0003528,4.68e-11,29;UBERON:0002791,4.68e-11,29;UBERON:0001893,4.68e-11,29;UBERON:0002021,9.15e-11,10;UBERON:0000411,9.15e-11,10;UBERON:0001950,9.15e-11,10;UBERON:0001948,1.09e-10,5;UBERON:0002315,1.09e-10,5;UBERON:0004684,1.20e-10,3;UBERON:0002275,1.20e-10,3;UBERON:0002038,2.02e-10,3;UBERON:0009663,2.02e-10,3;UBERON:0009661,2.02e-10,3;UBERON:0000125,2.02e-10,3;UBERON:0002308,2.02e-10,3;UBERON:0003056,6.62e-10,49;UBERON:0000025,1.32e-09,114;UBERON:0004111,1.09e-08,122;UBERON:0011216,1.97e-08,194;UBERON:0000956,3.02e-08,21;UBERON:0001869,3.02e-08,21;UBERON:0000203,3.02e-08,21;UBERON:0001896,3.68e-08,2;UBERON:0002298,3.68e-08,2;UBERON:0005290,3.68e-08,2;UBERON:0010096,3.68e-08,2;UBERON:0002619,4.55e-08,17;UBERON:0002256,1.69e-07,2 | |||
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0,0.467225281191051,0.387369970324729,0.985521055061667,0.936258105287974,0.34243593645101,0.239316476986009,0.342401459862411,0.611942816932982,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0.7813353445238,0,0,0,0.485510353031154,0,0,0,0,0,0,0.58328969722285,0.139986421625363,1.43752564364972,0.167782606057736,0.725362142011344,0.672187598284928,0,0,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.270011876663381,0,3.14216082844184,1.54607978666129,0.61245399607477,0.0958454710182364,0,2.20231761998777,2.042997409363,1.99688493233117,0.263772575460388,0.823388792421687,0,1.67509799400829,2.25105044012672,1.98637722109853,2.06240009831567,1.70846016958924,0.931997229126503,0.075726193333184,0.151143120213571,3.18850937571846,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0.479260498023681,0.599902730993408,0.127070227073065,2.24685959107234,0.915001205637253,0.628271760564322,1.56441888173049,0.767146371990992,3.1168206683934,1.46017136760982,0,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0.384341160854549,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.92614151141356,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,3.85321415970701,2.57865710502847,0,0,0.315508219416257,0,0.646270193198397,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,1.92792789853084,0.141940085208269,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0.120625849856312,0,0,0,2.78137953015765,0,0,0,0,0,0,0.339956859987711,0.979660166265606,0.276399947608848,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.747582730219894,0.330916980914195,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0.419437377702843,0.483168241652012,0.576060012515731,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0.221985953374065,0,0.167884616364078,0,0,0.183151624267265,0,0,1.6942555278512,1.84130094602871,0,2.06223818812425,0,1.5107877947794,0.675022500231806,1.80128481289688,0,1.55328093525546,0.207574695168353,0,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0,0,0.169229215783353,0.182927972872773,0.526139422875686,0,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.701794825336225,0.214871054048298,0,0,0.463735671240843 | |||
|short_description=p6@Rell2 | |||
}} |
Revision as of 16:07, 13 September 2013
Short description: | p6@Rell2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rell2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -423bp_to_ENSMUST00000070709, NM_153793, uc008erm.2, uc008ern.2_5end |
EntrezGene: | Rell2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.37e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.37e-15 | 23 |
raphe nuclei neuron | 1.20e-10 | 3 |
neuron of the substantia nigra | 2.02e-10 | 3 |
neuron | 5.73e-10 | 33 |
neuronal stem cell | 5.73e-10 | 33 |
neuroblast | 5.73e-10 | 33 |
electrically signaling cell | 5.73e-10 | 33 |
neural cell | 1.47e-08 | 43 |
ectodermal cell | 2.60e-08 | 44 |
neurectodermal cell | 2.60e-08 | 44 |
electrically responsive cell | 4.02e-08 | 39 |
electrically active cell | 4.02e-08 | 39 |
neuron of the dorsal spinal cord | 1.69e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.