FFCP PHASE1:Mm9::chr18:82731161..82731209,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=675|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:82731161..82731209,+|id=chr18:82731161..82731209,+|ontology_enrichment_celltype=CL:0000221!6.14e-08!44;CL:0000133!6.14e-08!44;CL:0000117!1.94e-07!23;CL:0000337!1.94e-07!23;CL:0002614!2.45e-07!3;CL:0002610!2.57e-07!3;CL:0002319!3.76e-07!43|ontology_enrichment_celltype_v019_2=CL:0002614,6.86e-12,3;CL:0002610,7.46e-12,3;CL:0000117,2.01e-09,23;CL:0000337,2.01e-09,23;CL:0002611,8.30e-09,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.05e-27!75;UBERON:0001016!4.05e-27!75;UBERON:0001017!9.93e-25!73;UBERON:0005743!9.93e-25!73;UBERON:0004121!8.69e-23!102;UBERON:0000924!8.69e-23!102;UBERON:0006601!8.69e-23!102;UBERON:0001049!2.52e-22!52;UBERON:0005068!2.52e-22!52;UBERON:0006241!2.52e-22!52;UBERON:0007135!2.52e-22!52;UBERON:0000033!1.18e-21!63;UBERON:0000955!1.43e-21!50;UBERON:0006238!1.43e-21!50;UBERON:0002616!2.91e-20!49;UBERON:0002021!2.06e-18!10;UBERON:0000411!2.06e-18!10;UBERON:0001950!2.06e-18!10;UBERON:0002346!4.33e-17!71;UBERON:0003075!4.33e-17!71;UBERON:0007284!4.33e-17!71;UBERON:0002020!6.19e-17!34;UBERON:0007811!8.32e-14!86;UBERON:0000153!5.19e-13!94;UBERON:0003076!5.44e-13!12;UBERON:0003057!5.44e-13!12;UBERON:0002298!1.09e-12!6;UBERON:0002791!4.28e-12!29;UBERON:0003528!4.28e-12!29;UBERON:0001893!4.28e-12!29;UBERON:0003080!7.13e-12!40;UBERON:0003056!2.92e-11!49;UBERON:0002780!8.29e-11!39;UBERON:0001890!8.29e-11!39;UBERON:0006240!8.29e-11!39;UBERON:0002619!6.49e-10!17;UBERON:0000956!4.35e-09!21;UBERON:0001869!4.35e-09!21;UBERON:0000203!4.35e-09!21;UBERON:0002950!6.88e-09!4;UBERON:0001891!6.88e-09!4;UBERON:0009616!6.88e-09!4;UBERON:0002240!1.23e-08!6;UBERON:0005174!1.23e-08!6;UBERON:0001137!1.23e-08!6;UBERON:0004111!3.05e-08!122;UBERON:0002038!2.45e-07!3;UBERON:0002308!2.45e-07!3;UBERON:0009663!2.45e-07!3;UBERON:0009661!2.45e-07!3;UBERON:0006331!2.45e-07!3;UBERON:0000125!2.45e-07!3;UBERON:0004684!2.57e-07!3;UBERON:0002275!2.57e-07!3;UBERON:0000025!4.06e-07!114;UBERON:0001948!6.78e-07!5;UBERON:0002315!6.78e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.64e-26,54;UBERON:0001017,1.61e-22,73;UBERON:0001016,8.16e-22,75;UBERON:0001049,1.16e-21,52;UBERON:0005068,1.16e-21,52;UBERON:0006241,1.16e-21,52;UBERON:0007135,1.16e-21,52;UBERON:0002346,6.66e-19,64;UBERON:0003075,6.66e-19,64;UBERON:0007284,6.66e-19,64;UBERON:0004121,4.71e-18,95;UBERON:0000924,4.71e-18,95;UBERON:0006601,4.71e-18,95;UBERON:0002616,6.29e-17,46;UBERON:0000955,1.67e-16,47;UBERON:0006238,1.67e-16,47;UBERON:0002021,2.38e-16,10;UBERON:0000411,2.38e-16,10;UBERON:0001950,2.38e-16,10;UBERON:0010371,4.03e-16,73;UBERON:0003076,1.68e-14,12;UBERON:0003057,1.68e-14,12;UBERON:0002020,3.39e-13,34;UBERON:0010314,4.99e-12,92;UBERON:0002038,6.86e-12,3;UBERON:0009663,6.86e-12,3;UBERON:0009661,6.86e-12,3;UBERON:0000125,6.86e-12,3;UBERON:0002308,6.86e-12,3;UBERON:0004684,7.46e-12,3;UBERON:0002275,7.46e-12,3;UBERON:0002780,6.44e-11,39;UBERON:0001890,6.44e-11,39;UBERON:0006240,6.44e-11,39;UBERON:0003528,1.17e-10,29;UBERON:0002791,1.17e-10,29;UBERON:0001893,1.17e-10,29;UBERON:0003080,1.37e-10,40;UBERON:0004733,4.53e-10,6;UBERON:0004732,4.53e-10,6;UBERON:0002028,4.53e-10,6;UBERON:0007277,4.53e-10,6;UBERON:0003056,9.70e-10,49;UBERON:0002619,2.77e-09,17;UBERON:0002950,4.99e-09,4;UBERON:0001891,4.99e-09,4;UBERON:0009616,4.99e-09,4;UBERON:0010286,4.99e-09,4;UBERON:0002256,8.30e-09,2;UBERON:0001896,1.95e-08,2;UBERON:0002298,1.95e-08,2;UBERON:0005290,1.95e-08,2;UBERON:0010096,1.95e-08,2;UBERON:0000025,6.17e-08,114;UBERON:0000956,2.34e-07,21;UBERON:0001869,2.34e-07,21;UBERON:0000203,2.34e-07,21;UBERON:0004111,3.54e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,1.92109152660777,0,0,0,5.71301968807607,5.74258206474195,0,0,0,6.60695285996332,2.55374676170375,1.38245879930619,0,0,0,4.74611098302348,2.25105044012672,2.44477196442896,0.589257170947335,0.711858403995515,0,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,6.49284791121711,0,0,0,0,0.748953197024114,0.457500602818626,0,0.173824320192276,2.81287003063364,1.0389402227978,1.94689515681309,0,0,0,0.210441855886474,0,0,0,0,0,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,3.98519734413491,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,5.9842280745933,1.14579102687879,1.3748254587495,2.05524755931193,1.5107877947794,1.35004500046361,1.35096360967266,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0|short_description=p@chr18:82731161..82731209,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=675 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:82731161..82731209,+ | |||
|id=chr18:82731161..82731209,+ | |||
|ontology_enrichment_celltype=CL:0000221!6.14e-08!44;CL:0000133!6.14e-08!44;CL:0000117!1.94e-07!23;CL:0000337!1.94e-07!23;CL:0002614!2.45e-07!3;CL:0002610!2.57e-07!3;CL:0002319!3.76e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,6.86e-12,3;CL:0002610,7.46e-12,3;CL:0000117,2.01e-09,23;CL:0000337,2.01e-09,23;CL:0002611,8.30e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.05e-27!75;UBERON:0001016!4.05e-27!75;UBERON:0001017!9.93e-25!73;UBERON:0005743!9.93e-25!73;UBERON:0004121!8.69e-23!102;UBERON:0000924!8.69e-23!102;UBERON:0006601!8.69e-23!102;UBERON:0001049!2.52e-22!52;UBERON:0005068!2.52e-22!52;UBERON:0006241!2.52e-22!52;UBERON:0007135!2.52e-22!52;UBERON:0000033!1.18e-21!63;UBERON:0000955!1.43e-21!50;UBERON:0006238!1.43e-21!50;UBERON:0002616!2.91e-20!49;UBERON:0002021!2.06e-18!10;UBERON:0000411!2.06e-18!10;UBERON:0001950!2.06e-18!10;UBERON:0002346!4.33e-17!71;UBERON:0003075!4.33e-17!71;UBERON:0007284!4.33e-17!71;UBERON:0002020!6.19e-17!34;UBERON:0007811!8.32e-14!86;UBERON:0000153!5.19e-13!94;UBERON:0003076!5.44e-13!12;UBERON:0003057!5.44e-13!12;UBERON:0002298!1.09e-12!6;UBERON:0002791!4.28e-12!29;UBERON:0003528!4.28e-12!29;UBERON:0001893!4.28e-12!29;UBERON:0003080!7.13e-12!40;UBERON:0003056!2.92e-11!49;UBERON:0002780!8.29e-11!39;UBERON:0001890!8.29e-11!39;UBERON:0006240!8.29e-11!39;UBERON:0002619!6.49e-10!17;UBERON:0000956!4.35e-09!21;UBERON:0001869!4.35e-09!21;UBERON:0000203!4.35e-09!21;UBERON:0002950!6.88e-09!4;UBERON:0001891!6.88e-09!4;UBERON:0009616!6.88e-09!4;UBERON:0002240!1.23e-08!6;UBERON:0005174!1.23e-08!6;UBERON:0001137!1.23e-08!6;UBERON:0004111!3.05e-08!122;UBERON:0002038!2.45e-07!3;UBERON:0002308!2.45e-07!3;UBERON:0009663!2.45e-07!3;UBERON:0009661!2.45e-07!3;UBERON:0006331!2.45e-07!3;UBERON:0000125!2.45e-07!3;UBERON:0004684!2.57e-07!3;UBERON:0002275!2.57e-07!3;UBERON:0000025!4.06e-07!114;UBERON:0001948!6.78e-07!5;UBERON:0002315!6.78e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.64e-26,54;UBERON:0001017,1.61e-22,73;UBERON:0001016,8.16e-22,75;UBERON:0001049,1.16e-21,52;UBERON:0005068,1.16e-21,52;UBERON:0006241,1.16e-21,52;UBERON:0007135,1.16e-21,52;UBERON:0002346,6.66e-19,64;UBERON:0003075,6.66e-19,64;UBERON:0007284,6.66e-19,64;UBERON:0004121,4.71e-18,95;UBERON:0000924,4.71e-18,95;UBERON:0006601,4.71e-18,95;UBERON:0002616,6.29e-17,46;UBERON:0000955,1.67e-16,47;UBERON:0006238,1.67e-16,47;UBERON:0002021,2.38e-16,10;UBERON:0000411,2.38e-16,10;UBERON:0001950,2.38e-16,10;UBERON:0010371,4.03e-16,73;UBERON:0003076,1.68e-14,12;UBERON:0003057,1.68e-14,12;UBERON:0002020,3.39e-13,34;UBERON:0010314,4.99e-12,92;UBERON:0002038,6.86e-12,3;UBERON:0009663,6.86e-12,3;UBERON:0009661,6.86e-12,3;UBERON:0000125,6.86e-12,3;UBERON:0002308,6.86e-12,3;UBERON:0004684,7.46e-12,3;UBERON:0002275,7.46e-12,3;UBERON:0002780,6.44e-11,39;UBERON:0001890,6.44e-11,39;UBERON:0006240,6.44e-11,39;UBERON:0003528,1.17e-10,29;UBERON:0002791,1.17e-10,29;UBERON:0001893,1.17e-10,29;UBERON:0003080,1.37e-10,40;UBERON:0004733,4.53e-10,6;UBERON:0004732,4.53e-10,6;UBERON:0002028,4.53e-10,6;UBERON:0007277,4.53e-10,6;UBERON:0003056,9.70e-10,49;UBERON:0002619,2.77e-09,17;UBERON:0002950,4.99e-09,4;UBERON:0001891,4.99e-09,4;UBERON:0009616,4.99e-09,4;UBERON:0010286,4.99e-09,4;UBERON:0002256,8.30e-09,2;UBERON:0001896,1.95e-08,2;UBERON:0002298,1.95e-08,2;UBERON:0005290,1.95e-08,2;UBERON:0010096,1.95e-08,2;UBERON:0000025,6.17e-08,114;UBERON:0000956,2.34e-07,21;UBERON:0001869,2.34e-07,21;UBERON:0000203,2.34e-07,21;UBERON:0004111,3.54e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,1.92109152660777,0,0,0,5.71301968807607,5.74258206474195,0,0,0,6.60695285996332,2.55374676170375,1.38245879930619,0,0,0,4.74611098302348,2.25105044012672,2.44477196442896,0.589257170947335,0.711858403995515,0,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,6.49284791121711,0,0,0,0,0.748953197024114,0.457500602818626,0,0.173824320192276,2.81287003063364,1.0389402227978,1.94689515681309,0,0,0,0.210441855886474,0,0,0,0,0,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,3.98519734413491,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,5.9842280745933,1.14579102687879,1.3748254587495,2.05524755931193,1.5107877947794,1.35004500046361,1.35096360967266,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0 | |||
|short_description=p@chr18:82731161..82731209,+ | |||
}} |
Revision as of 16:51, 13 September 2013
Short description: | p@chr18:82731161..82731209, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:82731161..82731209, + |
Coexpression cluster: | MCL_coexpression_mm9:675 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 6.86e-12 | 3 |
raphe nuclei neuron | 7.46e-12 | 3 |
CNS neuron (sensu Vertebrata) | 2.01e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.01e-09 | 23 |
neuron of the dorsal spinal cord | 8.30e-09 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.