FFCP PHASE1:Mm9::chr1:179374764..179374776,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=30928|HGNC=|MCL_coexpression_id=923|UniProt=Q9WUK6|association_with_transcript=-15bp_to_ENSMUST00000094276,NM_001012330,uc007dum.1,uc007dun.1_5end|description=CAGE_peak_5_at_Zfp238_5end|id=chr1:179374764..179374776,+|ontology_enrichment_celltype=CL:0000540!4.86e-13!33;CL:0000047!4.86e-13!33;CL:0000031!4.86e-13!33;CL:0000404!4.86e-13!33;CL:0000393!1.56e-09!39;CL:0000211!1.56e-09!39;CL:0002319!5.44e-09!43;CL:0000221!1.43e-08!44;CL:0000133!1.43e-08!44;CL:0000117!1.83e-08!23;CL:0000337!1.83e-08!23;CL:0002609!4.79e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,8.51e-13,6;CL:0000117,2.01e-11,23;CL:0000337,2.01e-11,23;CL:0000540,6.38e-11,33;CL:0000047,6.38e-11,33;CL:0000031,6.38e-11,33;CL:0000404,6.38e-11,33;CL:0000393,1.22e-08,39;CL:0000211,1.22e-08,39;CL:0002319,1.74e-07,43;CL:0000221,3.12e-07,44;CL:0000133,3.12e-07,44;CL:0002608,6.64e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002791!2.25e-17!29;UBERON:0003528!2.25e-17!29;UBERON:0001893!2.25e-17!29;UBERON:0001017!2.67e-17!73;UBERON:0005743!2.67e-17!73;UBERON:0000073!5.44e-17!75;UBERON:0001016!5.44e-17!75;UBERON:0002020!2.02e-16!34;UBERON:0000956!7.44e-16!21;UBERON:0001869!7.44e-16!21;UBERON:0000203!7.44e-16!21;UBERON:0004121!2.87e-14!102;UBERON:0000924!2.87e-14!102;UBERON:0006601!2.87e-14!102;UBERON:0000033!4.83e-14!63;UBERON:0002616!2.33e-13!49;UBERON:0002346!2.44e-13!71;UBERON:0003075!2.44e-13!71;UBERON:0007284!2.44e-13!71;UBERON:0000955!7.81e-13!50;UBERON:0006238!7.81e-13!50;UBERON:0001049!1.07e-12!52;UBERON:0005068!1.07e-12!52;UBERON:0006241!1.07e-12!52;UBERON:0007135!1.07e-12!52;UBERON:0002619!3.72e-12!17;UBERON:0003056!6.16e-12!49;UBERON:0002780!2.87e-11!39;UBERON:0001890!2.87e-11!39;UBERON:0006240!2.87e-11!39;UBERON:0003080!9.89e-11!40;UBERON:0002021!3.97e-10!10;UBERON:0000411!3.97e-10!10;UBERON:0001950!3.97e-10!10;UBERON:0007811!5.65e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.99e-32,29;UBERON:0002791,1.99e-32,29;UBERON:0001893,1.99e-32,29;UBERON:0000956,3.11e-32,21;UBERON:0001869,3.11e-32,21;UBERON:0000203,3.11e-32,21;UBERON:0002020,1.08e-26,34;UBERON:0002619,1.44e-24,17;UBERON:0002780,1.97e-22,39;UBERON:0001890,1.97e-22,39;UBERON:0006240,1.97e-22,39;UBERON:0002616,3.33e-22,46;UBERON:0003080,1.04e-21,40;UBERON:0000955,1.39e-21,47;UBERON:0006238,1.39e-21,47;UBERON:0000073,2.84e-21,54;UBERON:0001017,2.35e-20,73;UBERON:0001016,1.38e-19,75;UBERON:0002021,4.32e-19,10;UBERON:0000411,4.32e-19,10;UBERON:0001950,4.32e-19,10;UBERON:0001049,7.80e-19,52;UBERON:0005068,7.80e-19,52;UBERON:0006241,7.80e-19,52;UBERON:0007135,7.80e-19,52;UBERON:0003056,3.94e-18,49;UBERON:0002346,2.62e-15,64;UBERON:0003075,2.62e-15,64;UBERON:0007284,2.62e-15,64;UBERON:0004121,8.36e-15,95;UBERON:0000924,8.36e-15,95;UBERON:0006601,8.36e-15,95;UBERON:0010371,1.48e-12,73;UBERON:0010314,1.46e-08,92;UBERON:0001954,1.79e-07,7;UBERON:0003022,1.79e-07,7;UBERON:0002421,1.79e-07,7;UBERON:0000349,1.79e-07,7;UBERON:0002600,1.79e-07,7|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.137114433605739,0.42438965179803,0.765389611359628,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0.725362142011344,0,0,0,0,0.404632921719196,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,18.5604406032175,22.680997639724,19.3498964443271,0.285650984403804,0,9.79926393719632,6.42164655822184,10.1114066527102,0,1.78762273319263,2.15049146558741,0,0.0914876436024097,2.08365348222704,2.79182999001381,0,1.68078072554491,0.589257170947335,0,0.186399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0.323533699894818,0.220841518460394,0.969750506270444,0,18.737971008739,22.6202443358531,0,0.11981512450592,0.599902730993408,0.127070227073065,0,0.915001205637253,2.01046963380583,2.9550134432687,4.34716277461562,0,0.811206315338788,0,0,0,0,0.520481771850815,0.689706313300419,0,0.753524089178575,0.476255494059295,1.40925092313335,0.562210347358373,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8276868624118,14.3037411207205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0.646270193198397,1.43381278771531,2.00518806674155,1.13230612315533,0.404810701674894,0.876767573733936,0.395287777946524,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,10.7302850097243,11.5081309126794,8.59343270159095,7.56154002312225,9.59115527678899,7.55393897389701,5.40018000185445,8.10578165803597,5.43770890781046,9.31968561153276,0.415149390336707,0.399024873401031,0.512200817262403,0.729320151204882,0.419226325255965,0.367687016900028,0.44449345560323,0.618105171716683,1.60459604795908,1.26348605881899,0.760437899670719,1.69763707247469,0.655490552289177,0.704276676453562,1.03383844120104,0,1.39061191133827,0.192909220463705,0.412085900803307,1.03039244094078,1.37147700954166,1.4198064492747,0.238436189947321,1.0174249164263,0.846984423737976,0.930760686808441,0.365855945745545,0.526139422875686,1.35804113845862,1.12228454331548,0.949080144993393,0.886540341380071,2.45538625901814,1.23949472948773,1.35034627686799,3.74715866906919,1.40358965067245,0.429742108096597,0.191288332068843,0,0.231867835620421|short_description=p5@Zfp238}} | ||
|EntrezGene=30928 | |||
|HGNC= | |||
|MCL_coexpression_id=923 | |||
|UniProt=Q9WUK6 | |||
|association_with_transcript=-15bp_to_ENSMUST00000094276,NM_001012330,uc007dum.1,uc007dun.1_5end | |||
|description=CAGE_peak_5_at_Zfp238_5end | |||
|id=chr1:179374764..179374776,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.86e-13!33;CL:0000047!4.86e-13!33;CL:0000031!4.86e-13!33;CL:0000404!4.86e-13!33;CL:0000393!1.56e-09!39;CL:0000211!1.56e-09!39;CL:0002319!5.44e-09!43;CL:0000221!1.43e-08!44;CL:0000133!1.43e-08!44;CL:0000117!1.83e-08!23;CL:0000337!1.83e-08!23;CL:0002609!4.79e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,8.51e-13,6;CL:0000117,2.01e-11,23;CL:0000337,2.01e-11,23;CL:0000540,6.38e-11,33;CL:0000047,6.38e-11,33;CL:0000031,6.38e-11,33;CL:0000404,6.38e-11,33;CL:0000393,1.22e-08,39;CL:0000211,1.22e-08,39;CL:0002319,1.74e-07,43;CL:0000221,3.12e-07,44;CL:0000133,3.12e-07,44;CL:0002608,6.64e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!2.25e-17!29;UBERON:0003528!2.25e-17!29;UBERON:0001893!2.25e-17!29;UBERON:0001017!2.67e-17!73;UBERON:0005743!2.67e-17!73;UBERON:0000073!5.44e-17!75;UBERON:0001016!5.44e-17!75;UBERON:0002020!2.02e-16!34;UBERON:0000956!7.44e-16!21;UBERON:0001869!7.44e-16!21;UBERON:0000203!7.44e-16!21;UBERON:0004121!2.87e-14!102;UBERON:0000924!2.87e-14!102;UBERON:0006601!2.87e-14!102;UBERON:0000033!4.83e-14!63;UBERON:0002616!2.33e-13!49;UBERON:0002346!2.44e-13!71;UBERON:0003075!2.44e-13!71;UBERON:0007284!2.44e-13!71;UBERON:0000955!7.81e-13!50;UBERON:0006238!7.81e-13!50;UBERON:0001049!1.07e-12!52;UBERON:0005068!1.07e-12!52;UBERON:0006241!1.07e-12!52;UBERON:0007135!1.07e-12!52;UBERON:0002619!3.72e-12!17;UBERON:0003056!6.16e-12!49;UBERON:0002780!2.87e-11!39;UBERON:0001890!2.87e-11!39;UBERON:0006240!2.87e-11!39;UBERON:0003080!9.89e-11!40;UBERON:0002021!3.97e-10!10;UBERON:0000411!3.97e-10!10;UBERON:0001950!3.97e-10!10;UBERON:0007811!5.65e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.99e-32,29;UBERON:0002791,1.99e-32,29;UBERON:0001893,1.99e-32,29;UBERON:0000956,3.11e-32,21;UBERON:0001869,3.11e-32,21;UBERON:0000203,3.11e-32,21;UBERON:0002020,1.08e-26,34;UBERON:0002619,1.44e-24,17;UBERON:0002780,1.97e-22,39;UBERON:0001890,1.97e-22,39;UBERON:0006240,1.97e-22,39;UBERON:0002616,3.33e-22,46;UBERON:0003080,1.04e-21,40;UBERON:0000955,1.39e-21,47;UBERON:0006238,1.39e-21,47;UBERON:0000073,2.84e-21,54;UBERON:0001017,2.35e-20,73;UBERON:0001016,1.38e-19,75;UBERON:0002021,4.32e-19,10;UBERON:0000411,4.32e-19,10;UBERON:0001950,4.32e-19,10;UBERON:0001049,7.80e-19,52;UBERON:0005068,7.80e-19,52;UBERON:0006241,7.80e-19,52;UBERON:0007135,7.80e-19,52;UBERON:0003056,3.94e-18,49;UBERON:0002346,2.62e-15,64;UBERON:0003075,2.62e-15,64;UBERON:0007284,2.62e-15,64;UBERON:0004121,8.36e-15,95;UBERON:0000924,8.36e-15,95;UBERON:0006601,8.36e-15,95;UBERON:0010371,1.48e-12,73;UBERON:0010314,1.46e-08,92;UBERON:0001954,1.79e-07,7;UBERON:0003022,1.79e-07,7;UBERON:0002421,1.79e-07,7;UBERON:0000349,1.79e-07,7;UBERON:0002600,1.79e-07,7 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.137114433605739,0.42438965179803,0.765389611359628,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0.725362142011344,0,0,0,0,0.404632921719196,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,18.5604406032175,22.680997639724,19.3498964443271,0.285650984403804,0,9.79926393719632,6.42164655822184,10.1114066527102,0,1.78762273319263,2.15049146558741,0,0.0914876436024097,2.08365348222704,2.79182999001381,0,1.68078072554491,0.589257170947335,0,0.186399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0.323533699894818,0.220841518460394,0.969750506270444,0,18.737971008739,22.6202443358531,0,0.11981512450592,0.599902730993408,0.127070227073065,0,0.915001205637253,2.01046963380583,2.9550134432687,4.34716277461562,0,0.811206315338788,0,0,0,0,0.520481771850815,0.689706313300419,0,0.753524089178575,0.476255494059295,1.40925092313335,0.562210347358373,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8276868624118,14.3037411207205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0.646270193198397,1.43381278771531,2.00518806674155,1.13230612315533,0.404810701674894,0.876767573733936,0.395287777946524,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,10.7302850097243,11.5081309126794,8.59343270159095,7.56154002312225,9.59115527678899,7.55393897389701,5.40018000185445,8.10578165803597,5.43770890781046,9.31968561153276,0.415149390336707,0.399024873401031,0.512200817262403,0.729320151204882,0.419226325255965,0.367687016900028,0.44449345560323,0.618105171716683,1.60459604795908,1.26348605881899,0.760437899670719,1.69763707247469,0.655490552289177,0.704276676453562,1.03383844120104,0,1.39061191133827,0.192909220463705,0.412085900803307,1.03039244094078,1.37147700954166,1.4198064492747,0.238436189947321,1.0174249164263,0.846984423737976,0.930760686808441,0.365855945745545,0.526139422875686,1.35804113845862,1.12228454331548,0.949080144993393,0.886540341380071,2.45538625901814,1.23949472948773,1.35034627686799,3.74715866906919,1.40358965067245,0.429742108096597,0.191288332068843,0,0.231867835620421 | |||
|short_description=p5@Zfp238 | |||
}} |
Revision as of 19:52, 13 September 2013
Short description: | p5@Zfp238 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Zfp238_5end |
Coexpression cluster: | MCL_coexpression_mm9:923 |
Association with transcript: | -15bp_to_ENSMUST00000094276, NM_001012330, uc007dum.1, uc007dun.1_5end |
EntrezGene: | Zfp238 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 8.51e-13 | 6 |
CNS neuron (sensu Vertebrata) | 2.01e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.01e-11 | 23 |
neuron | 6.38e-11 | 33 |
neuronal stem cell | 6.38e-11 | 33 |
neuroblast | 6.38e-11 | 33 |
electrically signaling cell | 6.38e-11 | 33 |
electrically responsive cell | 1.22e-08 | 39 |
electrically active cell | 1.22e-08 | 39 |
neural cell | 1.74e-07 | 43 |
ectodermal cell | 3.12e-07 | 44 |
neurectodermal cell | 3.12e-07 | 44 |
hippocampal neuron | 6.64e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.