FFCP PHASE1:Mm9::chr3:17689727..17689763,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70441|HGNC=|MCL_coexpression_id=22|UniProt=|association_with_transcript=-157bp_to_NR_033490,uc008orj.2_5end|description=CAGE_peak_2_at_2610100L16Rik_5end|id=chr3:17689727..17689763,+|ontology_enrichment_celltype=CL:0000117!1.22e-22!23;CL:0000337!1.22e-22!23;CL:0000540!5.59e-13!33;CL:0000047!5.59e-13!33;CL:0000031!5.59e-13!33;CL:0000404!5.59e-13!33;CL:0000221!3.82e-11!44;CL:0000133!3.82e-11!44;CL:0002319!7.12e-11!43;CL:0000393!1.11e-09!39;CL:0000211!1.11e-09!39;CL:0000055!4.17e-08!50;CL:0002609!3.12e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,6.39e-26,23;CL:0000337,6.39e-26,23;CL:0000540,1.66e-15,33;CL:0000047,1.66e-15,33;CL:0000031,1.66e-15,33;CL:0000404,1.66e-15,33;CL:0000393,6.73e-12,39;CL:0000211,6.73e-12,39;CL:0002319,4.38e-10,43;CL:0000221,1.09e-09,44;CL:0000133,1.09e-09,44;CL:0002609,4.07e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.14e-32!63;UBERON:0002346!8.10e-29!71;UBERON:0003075!8.10e-29!71;UBERON:0007284!8.10e-29!71;UBERON:0003056!1.95e-28!49;UBERON:0001049!2.86e-28!52;UBERON:0005068!2.86e-28!52;UBERON:0006241!2.86e-28!52;UBERON:0007135!2.86e-28!52;UBERON:0000955!1.44e-26!50;UBERON:0006238!1.44e-26!50;UBERON:0002020!1.94e-26!34;UBERON:0001017!4.25e-26!73;UBERON:0005743!4.25e-26!73;UBERON:0000073!8.22e-26!75;UBERON:0001016!8.22e-26!75;UBERON:0002616!1.38e-25!49;UBERON:0004121!7.39e-25!102;UBERON:0000924!7.39e-25!102;UBERON:0006601!7.39e-25!102;UBERON:0002791!9.66e-22!29;UBERON:0003528!9.66e-22!29;UBERON:0001893!9.66e-22!29;UBERON:0003080!1.98e-20!40;UBERON:0007811!1.17e-19!86;UBERON:0002780!1.52e-19!39;UBERON:0001890!1.52e-19!39;UBERON:0006240!1.52e-19!39;UBERON:0000153!1.97e-16!94;UBERON:0000956!7.93e-15!21;UBERON:0001869!7.93e-15!21;UBERON:0000203!7.93e-15!21;UBERON:0002619!1.89e-11!17;UBERON:0000970!5.77e-09!9;UBERON:0000019!5.77e-09!9;UBERON:0000047!5.77e-09!9;UBERON:0004088!5.77e-09!9;UBERON:0002104!5.77e-09!9;UBERON:0001456!5.77e-09!9;UBERON:0003072!5.77e-09!9;UBERON:0003071!5.77e-09!9;UBERON:0004128!5.77e-09!9;UBERON:0003076!2.75e-08!12;UBERON:0003057!2.75e-08!12;UBERON:0002021!2.85e-08!10;UBERON:0000411!2.85e-08!10;UBERON:0001950!2.85e-08!10;UBERON:0002420!4.02e-08!8;UBERON:0007245!4.02e-08!8;UBERON:0010009!4.02e-08!8;UBERON:0010011!4.02e-08!8;UBERON:0000454!4.02e-08!8;UBERON:0000020!4.98e-07!12;UBERON:0001032!4.98e-07!12;UBERON:0004456!4.98e-07!12;UBERON:0001444!7.90e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.02e-33,64;UBERON:0003075,1.02e-33,64;UBERON:0007284,1.02e-33,64;UBERON:0000073,4.89e-29,54;UBERON:0002020,5.76e-29,34;UBERON:0003056,4.96e-28,49;UBERON:0010371,1.54e-27,73;UBERON:0004121,6.86e-27,95;UBERON:0000924,6.86e-27,95;UBERON:0006601,6.86e-27,95;UBERON:0001049,8.69e-27,52;UBERON:0005068,8.69e-27,52;UBERON:0006241,8.69e-27,52;UBERON:0007135,8.69e-27,52;UBERON:0001017,4.09e-25,73;UBERON:0001016,5.00e-24,75;UBERON:0003528,1.41e-23,29;UBERON:0002791,1.41e-23,29;UBERON:0001893,1.41e-23,29;UBERON:0000955,7.77e-22,47;UBERON:0006238,7.77e-22,47;UBERON:0002616,8.29e-21,46;UBERON:0003080,3.30e-19,40;UBERON:0010314,1.48e-18,92;UBERON:0002780,3.04e-18,39;UBERON:0001890,3.04e-18,39;UBERON:0006240,3.04e-18,39;UBERON:0000956,1.16e-15,21;UBERON:0001869,1.16e-15,21;UBERON:0000203,1.16e-15,21;UBERON:0002619,8.02e-12,17;UBERON:0000970,4.08e-10,9;UBERON:0000019,4.08e-10,9;UBERON:0000047,4.08e-10,9;UBERON:0010312,4.08e-10,9;UBERON:0004088,4.08e-10,9;UBERON:0002104,4.08e-10,9;UBERON:0001456,4.08e-10,9;UBERON:0003072,4.08e-10,9;UBERON:0004128,4.08e-10,9;UBERON:0003071,4.08e-10,9;UBERON:0002021,2.58e-09,10;UBERON:0000411,2.58e-09,10;UBERON:0001950,2.58e-09,10;UBERON:0002420,3.83e-09,8;UBERON:0007245,3.83e-09,8;UBERON:0010009,3.83e-09,8;UBERON:0010011,3.83e-09,8;UBERON:0000454,3.83e-09,8;UBERON:0003076,4.21e-08,12;UBERON:0003057,4.21e-08,12;UBERON:0001444,7.99e-08,11;UBERON:0002240,1.83e-07,6;UBERON:0005174,1.83e-07,6;UBERON:0001137,1.83e-07,6;UBERON:0000369,4.42e-07,5;UBERON:0002435,4.42e-07,5;UBERON:0000204,4.42e-07,5;UBERON:0010082,4.42e-07,5;UBERON:0000020,5.67e-07,12;UBERON:0001032,5.67e-07,12;UBERON:0004456,5.67e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,18.0061650165042,12.1667925232568,8.23980824558033,0,0,0,0,0,0,0,9.02099627083756,7.56033254657468,7.36137364729837,6.85562362569129,6.84692476950002,9.30930074033651,11.8848384062613,9.19218786610021,8.8092704799511,6.51205424234457,9.06278546211836,13.7161739239402,17.8400905024699,11.9810075228055,7.2587579740359,1.68828783009504,3.51435969886663,6.77645746589436,7.26095572075425,14.5391567743734,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,2.92780797011547,2.30391377494801,0,0,0,0,7.48953197024113,5.49000723382352,7.79056983099759,4.17178368461463,5.8814555185976,5.40248915854856,7.3008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| ||
|EntrezGene=70441 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt= | |||
|association_with_transcript=-157bp_to_NR_033490,uc008orj.2_5end | |||
|description=CAGE_peak_2_at_2610100L16Rik_5end | |||
|id=chr3:17689727..17689763,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.22e-22!23;CL:0000337!1.22e-22!23;CL:0000540!5.59e-13!33;CL:0000047!5.59e-13!33;CL:0000031!5.59e-13!33;CL:0000404!5.59e-13!33;CL:0000221!3.82e-11!44;CL:0000133!3.82e-11!44;CL:0002319!7.12e-11!43;CL:0000393!1.11e-09!39;CL:0000211!1.11e-09!39;CL:0000055!4.17e-08!50;CL:0002609!3.12e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.39e-26,23;CL:0000337,6.39e-26,23;CL:0000540,1.66e-15,33;CL:0000047,1.66e-15,33;CL:0000031,1.66e-15,33;CL:0000404,1.66e-15,33;CL:0000393,6.73e-12,39;CL:0000211,6.73e-12,39;CL:0002319,4.38e-10,43;CL:0000221,1.09e-09,44;CL:0000133,1.09e-09,44;CL:0002609,4.07e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.14e-32!63;UBERON:0002346!8.10e-29!71;UBERON:0003075!8.10e-29!71;UBERON:0007284!8.10e-29!71;UBERON:0003056!1.95e-28!49;UBERON:0001049!2.86e-28!52;UBERON:0005068!2.86e-28!52;UBERON:0006241!2.86e-28!52;UBERON:0007135!2.86e-28!52;UBERON:0000955!1.44e-26!50;UBERON:0006238!1.44e-26!50;UBERON:0002020!1.94e-26!34;UBERON:0001017!4.25e-26!73;UBERON:0005743!4.25e-26!73;UBERON:0000073!8.22e-26!75;UBERON:0001016!8.22e-26!75;UBERON:0002616!1.38e-25!49;UBERON:0004121!7.39e-25!102;UBERON:0000924!7.39e-25!102;UBERON:0006601!7.39e-25!102;UBERON:0002791!9.66e-22!29;UBERON:0003528!9.66e-22!29;UBERON:0001893!9.66e-22!29;UBERON:0003080!1.98e-20!40;UBERON:0007811!1.17e-19!86;UBERON:0002780!1.52e-19!39;UBERON:0001890!1.52e-19!39;UBERON:0006240!1.52e-19!39;UBERON:0000153!1.97e-16!94;UBERON:0000956!7.93e-15!21;UBERON:0001869!7.93e-15!21;UBERON:0000203!7.93e-15!21;UBERON:0002619!1.89e-11!17;UBERON:0000970!5.77e-09!9;UBERON:0000019!5.77e-09!9;UBERON:0000047!5.77e-09!9;UBERON:0004088!5.77e-09!9;UBERON:0002104!5.77e-09!9;UBERON:0001456!5.77e-09!9;UBERON:0003072!5.77e-09!9;UBERON:0003071!5.77e-09!9;UBERON:0004128!5.77e-09!9;UBERON:0003076!2.75e-08!12;UBERON:0003057!2.75e-08!12;UBERON:0002021!2.85e-08!10;UBERON:0000411!2.85e-08!10;UBERON:0001950!2.85e-08!10;UBERON:0002420!4.02e-08!8;UBERON:0007245!4.02e-08!8;UBERON:0010009!4.02e-08!8;UBERON:0010011!4.02e-08!8;UBERON:0000454!4.02e-08!8;UBERON:0000020!4.98e-07!12;UBERON:0001032!4.98e-07!12;UBERON:0004456!4.98e-07!12;UBERON:0001444!7.90e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.02e-33,64;UBERON:0003075,1.02e-33,64;UBERON:0007284,1.02e-33,64;UBERON:0000073,4.89e-29,54;UBERON:0002020,5.76e-29,34;UBERON:0003056,4.96e-28,49;UBERON:0010371,1.54e-27,73;UBERON:0004121,6.86e-27,95;UBERON:0000924,6.86e-27,95;UBERON:0006601,6.86e-27,95;UBERON:0001049,8.69e-27,52;UBERON:0005068,8.69e-27,52;UBERON:0006241,8.69e-27,52;UBERON:0007135,8.69e-27,52;UBERON:0001017,4.09e-25,73;UBERON:0001016,5.00e-24,75;UBERON:0003528,1.41e-23,29;UBERON:0002791,1.41e-23,29;UBERON:0001893,1.41e-23,29;UBERON:0000955,7.77e-22,47;UBERON:0006238,7.77e-22,47;UBERON:0002616,8.29e-21,46;UBERON:0003080,3.30e-19,40;UBERON:0010314,1.48e-18,92;UBERON:0002780,3.04e-18,39;UBERON:0001890,3.04e-18,39;UBERON:0006240,3.04e-18,39;UBERON:0000956,1.16e-15,21;UBERON:0001869,1.16e-15,21;UBERON:0000203,1.16e-15,21;UBERON:0002619,8.02e-12,17;UBERON:0000970,4.08e-10,9;UBERON:0000019,4.08e-10,9;UBERON:0000047,4.08e-10,9;UBERON:0010312,4.08e-10,9;UBERON:0004088,4.08e-10,9;UBERON:0002104,4.08e-10,9;UBERON:0001456,4.08e-10,9;UBERON:0003072,4.08e-10,9;UBERON:0004128,4.08e-10,9;UBERON:0003071,4.08e-10,9;UBERON:0002021,2.58e-09,10;UBERON:0000411,2.58e-09,10;UBERON:0001950,2.58e-09,10;UBERON:0002420,3.83e-09,8;UBERON:0007245,3.83e-09,8;UBERON:0010009,3.83e-09,8;UBERON:0010011,3.83e-09,8;UBERON:0000454,3.83e-09,8;UBERON:0003076,4.21e-08,12;UBERON:0003057,4.21e-08,12;UBERON:0001444,7.99e-08,11;UBERON:0002240,1.83e-07,6;UBERON:0005174,1.83e-07,6;UBERON:0001137,1.83e-07,6;UBERON:0000369,4.42e-07,5;UBERON:0002435,4.42e-07,5;UBERON:0000204,4.42e-07,5;UBERON:0010082,4.42e-07,5;UBERON:0000020,5.67e-07,12;UBERON:0001032,5.67e-07,12;UBERON:0004456,5.67e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,18.0061650165042,12.1667925232568,8.23980824558033,0,0,0,0,0,0,0,9.02099627083756,7.56033254657468,7.36137364729837,6.85562362569129,6.84692476950002,9.30930074033651,11.8848384062613,9.19218786610021,8.8092704799511,6.51205424234457,9.06278546211836,13.7161739239402,17.8400905024699,11.9810075228055,7.2587579740359,1.68828783009504,3.51435969886663,6.77645746589436,7.26095572075425,14.5391567743734,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,2.92780797011547,2.30391377494801,0,0,0,0,7.48953197024113,5.49000723382352,7.79056983099759,4.17178368461463,5.8814555185976,5.40248915854856,7.30085683804909,0,0,0,4.8401626853889,2.60240885925407,5.0578462975364,5.94205028357652,8.59017461663576,13.6753363294169,12.9394857487698,10.1197862524507,6.20888089773638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,2.57261530948211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,5.39173758324135,0,0,0,0,0,0,0,0,0,0,0,8.35435422696698,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.428674070063185,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67531087237835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0827665835536,5.52390283808612,3.43737308063638,3.09335728218638,5.48066015816514,7.55393897389701,5.40018000185445,4.95353323546643,3.17199686288943,2.07104124700728,3.52876981786201,7.98049746802062,2.90247129782028,1.70174701947806,1.88651846365184,1.10306105070008,0.666740183404846,1.03017528619447,0.320919209591815,1.51618327058278,0.760437899670719,1.88626341386076,1.49826411951812,1.72867911493147,1.32101578597911,1.42888107384922,1.85414921511769,1.15745532278223,0.412085900803307,2.20798380201596,1.71434626192708,1.4198064492747,1.90748951957857,1.74415699958794,1.12931256498397,1.26921911837515,2.37806364734604,1.05227884575137,1.7654534799962,0,1.30498519936592,0.886540341380071,2.04615521584845,2.47898945897546,2.12197272079256,3.2475375131933,1.16965804222704,0.859484216193193,0.57386499620653,0,0.231867835620421 | |||
|short_description=p2@2610100L16Rik | |||
}} |
Revision as of 01:56, 14 September 2013
Short description: | p2@2610100L16Rik |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_2610100L16Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -157bp_to_NR_033490, uc008orj.2_5end |
EntrezGene: | 2610100L16Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.39e-26 | 23 |
neuroblast (sensu Vertebrata) | 6.39e-26 | 23 |
neuron | 1.66e-15 | 33 |
neuronal stem cell | 1.66e-15 | 33 |
neuroblast | 1.66e-15 | 33 |
electrically signaling cell | 1.66e-15 | 33 |
electrically responsive cell | 6.73e-12 | 39 |
electrically active cell | 6.73e-12 | 39 |
neural cell | 4.38e-10 | 43 |
ectodermal cell | 1.09e-09 | 44 |
neurectodermal cell | 1.09e-09 | 44 |
neuron of cerebral cortex | 4.07e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.