FFCP PHASE1:Mm9::chr3:17690051..17690068,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70441|HGNC=|MCL_coexpression_id=22|UniProt=|association_with_transcript=130bp_to_NR_033490,uc008orj.2_5end|description=CAGE_peak_3_at_2610100L16Rik_5end|id=chr3:17690051..17690068,+|ontology_enrichment_celltype=CL:0000117!2.84e-21!23;CL:0000337!2.84e-21!23;CL:0000540!3.38e-13!33;CL:0000047!3.38e-13!33;CL:0000031!3.38e-13!33;CL:0000404!3.38e-13!33;CL:0000393!6.82e-10!39;CL:0000211!6.82e-10!39;CL:0002319!1.20e-09!43;CL:0000221!3.07e-09!44;CL:0000133!3.07e-09!44;CL:0002609!8.60e-08!6;CL:0000055!3.56e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.52e-30,23;CL:0000337,7.52e-30,23;CL:0000540,1.18e-18,33;CL:0000047,1.18e-18,33;CL:0000031,1.18e-18,33;CL:0000404,1.18e-18,33;CL:0000393,9.88e-15,39;CL:0000211,9.88e-15,39;CL:0002319,9.67e-13,43;CL:0000221,2.66e-12,44;CL:0000133,2.66e-12,44;CL:0002609,2.07e-10,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.03e-28!63;UBERON:0003056!6.16e-27!49;UBERON:0001017!1.15e-26!73;UBERON:0005743!1.15e-26!73;UBERON:0001049!2.79e-26!52;UBERON:0005068!2.79e-26!52;UBERON:0006241!2.79e-26!52;UBERON:0007135!2.79e-26!52;UBERON:0002020!3.40e-26!34;UBERON:0002346!7.08e-26!71;UBERON:0003075!7.08e-26!71;UBERON:0007284!7.08e-26!71;UBERON:0000073!1.85e-25!75;UBERON:0001016!1.85e-25!75;UBERON:0000955!8.67e-25!50;UBERON:0006238!8.67e-25!50;UBERON:0002616!9.02e-24!49;UBERON:0004121!7.79e-23!102;UBERON:0000924!7.79e-23!102;UBERON:0006601!7.79e-23!102;UBERON:0002791!1.17e-21!29;UBERON:0003528!1.17e-21!29;UBERON:0001893!1.17e-21!29;UBERON:0003080!1.98e-20!40;UBERON:0002780!1.36e-19!39;UBERON:0001890!1.36e-19!39;UBERON:0006240!1.36e-19!39;UBERON:0000956!3.07e-16!21;UBERON:0001869!3.07e-16!21;UBERON:0000203!3.07e-16!21;UBERON:0007811!3.19e-16!86;UBERON:0000153!1.82e-13!94;UBERON:0002619!2.06e-12!17;UBERON:0002021!1.58e-10!10;UBERON:0000411!1.58e-10!10;UBERON:0001950!1.58e-10!10;UBERON:0000970!2.72e-07!9;UBERON:0000019!2.72e-07!9;UBERON:0000047!2.72e-07!9;UBERON:0004088!2.72e-07!9;UBERON:0002104!2.72e-07!9;UBERON:0001456!2.72e-07!9;UBERON:0003072!2.72e-07!9;UBERON:0003071!2.72e-07!9;UBERON:0004128!2.72e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.60e-35,64;UBERON:0003075,1.60e-35,64;UBERON:0007284,1.60e-35,64;UBERON:0002020,2.59e-35,34;UBERON:0000073,1.23e-32,54;UBERON:0003056,7.15e-32,49;UBERON:0004121,1.48e-30,95;UBERON:0000924,1.48e-30,95;UBERON:0006601,1.48e-30,95;UBERON:0001049,5.90e-30,52;UBERON:0005068,5.90e-30,52;UBERON:0006241,5.90e-30,52;UBERON:0007135,5.90e-30,52;UBERON:0001017,1.06e-29,73;UBERON:0010371,1.38e-29,73;UBERON:0003528,6.87e-29,29;UBERON:0002791,6.87e-29,29;UBERON:0001893,6.87e-29,29;UBERON:0001016,1.42e-28,75;UBERON:0000955,1.98e-24,47;UBERON:0006238,1.98e-24,47;UBERON:0003080,2.74e-24,40;UBERON:0002780,3.77e-23,39;UBERON:0001890,3.77e-23,39;UBERON:0006240,3.77e-23,39;UBERON:0002616,3.93e-23,46;UBERON:0000956,6.08e-21,21;UBERON:0001869,6.08e-21,21;UBERON:0000203,6.08e-21,21;UBERON:0010314,6.69e-21,92;UBERON:0002619,1.40e-15,17;UBERON:0002021,2.75e-14,10;UBERON:0000411,2.75e-14,10;UBERON:0001950,2.75e-14,10;UBERON:0002420,6.25e-09,8;UBERON:0007245,6.25e-09,8;UBERON:0010009,6.25e-09,8;UBERON:0010011,6.25e-09,8;UBERON:0000454,6.25e-09,8;UBERON:0000369,2.32e-08,5;UBERON:0002435,2.32e-08,5;UBERON:0000204,2.32e-08,5;UBERON:0010082,2.32e-08,5;UBERON:0002240,2.47e-08,6;UBERON:0005174,2.47e-08,6;UBERON:0001137,2.47e-08,6;UBERON:0000970,3.47e-08,9;UBERON:0000019,3.47e-08,9;UBERON:0000047,3.47e-08,9;UBERON:0010312,3.47e-08,9;UBERON:0004088,3.47e-08,9;UBERON:0002104,3.47e-08,9;UBERON:0001456,3.47e-08,9;UBERON:0003072,3.47e-08,9;UBERON:0004128,3.47e-08,9;UBERON:0003071,3.47e-08,9;UBERON:0000025,4.27e-08,114;UBERON:0001948,1.84e-07,5;UBERON:0002315,1.84e-07,5;UBERON:0004111,5.83e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,13.7575193384526,18.5146842745212,10.775133859605,0,0,0,0,0,0.299600110518405,0,7.67303131082735,10.8004750665353,7.36137364729837,5.71301968807607,5.07997644188711,11.0241719293459,9.4887016308054,17.4651569455904,4.40463523997555,5.36286819957788,4.30098293117482,11.2103344570665,10.8870295886867,8.33461392890816,2.79182999001381,0,2.90316670775939,1.76777151284201,6.54909731675874,6.52398060388552,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,4.19413790333504,2.74500361691176,6.91098936620754,3.65031072403781,2.55715457330331,3.1168206683934,4.54275536589721,0,0,0,0.210441855886474,2.47228841629137,3.44853156650209,2.88099407688559,2.41127708537144,3.33378845841506,2.8185018462667,1.49922759295566,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,2.36680608472354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.99259867206745,0,0,0,0,0,0,0,0,0,0.292255857911312,0,8.67567554338879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,6.90487854760765,5.15605962095457,5.499301834998,2.05524755931193,9.82012066606611,8.77529250301348,4.95353323546643,5.89085131679466,6.73088405277366,1.14166082342594,2.79317411380722,2.39027048055788,0.486213434136588,1.25767897576789,0.183843508450014,1.11123363900808,0.618105171716683,0.962757628775446,1.51618327058278,0.760437899670719,0.754505365544305,0.842773567228942,0.960377286073039,1.14870937911227,0.952587382566147,0.695305955669133,0.578727661391115,1.64834360321323,1.17759136107518,1.71434626192708,0.354951612318675,0.715308569841963,0.872078499793971,1.12931256498397,0.507687647350059,0.73171189149109,0.263069711437843,1.08643291076689,1.12228454331548,0.237270036248348,0.591026894253381,0.409231043169689,0.77468420592983,0.964533054905707,2.74791635731741,0.701794825336225,0.859484216193193,0.191288332068843,0,0.231867835620421|short_description=p3@2610100L16Rik}} | ||
|EntrezGene=70441 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt= | |||
|association_with_transcript=130bp_to_NR_033490,uc008orj.2_5end | |||
|description=CAGE_peak_3_at_2610100L16Rik_5end | |||
|id=chr3:17690051..17690068,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.84e-21!23;CL:0000337!2.84e-21!23;CL:0000540!3.38e-13!33;CL:0000047!3.38e-13!33;CL:0000031!3.38e-13!33;CL:0000404!3.38e-13!33;CL:0000393!6.82e-10!39;CL:0000211!6.82e-10!39;CL:0002319!1.20e-09!43;CL:0000221!3.07e-09!44;CL:0000133!3.07e-09!44;CL:0002609!8.60e-08!6;CL:0000055!3.56e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.52e-30,23;CL:0000337,7.52e-30,23;CL:0000540,1.18e-18,33;CL:0000047,1.18e-18,33;CL:0000031,1.18e-18,33;CL:0000404,1.18e-18,33;CL:0000393,9.88e-15,39;CL:0000211,9.88e-15,39;CL:0002319,9.67e-13,43;CL:0000221,2.66e-12,44;CL:0000133,2.66e-12,44;CL:0002609,2.07e-10,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.03e-28!63;UBERON:0003056!6.16e-27!49;UBERON:0001017!1.15e-26!73;UBERON:0005743!1.15e-26!73;UBERON:0001049!2.79e-26!52;UBERON:0005068!2.79e-26!52;UBERON:0006241!2.79e-26!52;UBERON:0007135!2.79e-26!52;UBERON:0002020!3.40e-26!34;UBERON:0002346!7.08e-26!71;UBERON:0003075!7.08e-26!71;UBERON:0007284!7.08e-26!71;UBERON:0000073!1.85e-25!75;UBERON:0001016!1.85e-25!75;UBERON:0000955!8.67e-25!50;UBERON:0006238!8.67e-25!50;UBERON:0002616!9.02e-24!49;UBERON:0004121!7.79e-23!102;UBERON:0000924!7.79e-23!102;UBERON:0006601!7.79e-23!102;UBERON:0002791!1.17e-21!29;UBERON:0003528!1.17e-21!29;UBERON:0001893!1.17e-21!29;UBERON:0003080!1.98e-20!40;UBERON:0002780!1.36e-19!39;UBERON:0001890!1.36e-19!39;UBERON:0006240!1.36e-19!39;UBERON:0000956!3.07e-16!21;UBERON:0001869!3.07e-16!21;UBERON:0000203!3.07e-16!21;UBERON:0007811!3.19e-16!86;UBERON:0000153!1.82e-13!94;UBERON:0002619!2.06e-12!17;UBERON:0002021!1.58e-10!10;UBERON:0000411!1.58e-10!10;UBERON:0001950!1.58e-10!10;UBERON:0000970!2.72e-07!9;UBERON:0000019!2.72e-07!9;UBERON:0000047!2.72e-07!9;UBERON:0004088!2.72e-07!9;UBERON:0002104!2.72e-07!9;UBERON:0001456!2.72e-07!9;UBERON:0003072!2.72e-07!9;UBERON:0003071!2.72e-07!9;UBERON:0004128!2.72e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.60e-35,64;UBERON:0003075,1.60e-35,64;UBERON:0007284,1.60e-35,64;UBERON:0002020,2.59e-35,34;UBERON:0000073,1.23e-32,54;UBERON:0003056,7.15e-32,49;UBERON:0004121,1.48e-30,95;UBERON:0000924,1.48e-30,95;UBERON:0006601,1.48e-30,95;UBERON:0001049,5.90e-30,52;UBERON:0005068,5.90e-30,52;UBERON:0006241,5.90e-30,52;UBERON:0007135,5.90e-30,52;UBERON:0001017,1.06e-29,73;UBERON:0010371,1.38e-29,73;UBERON:0003528,6.87e-29,29;UBERON:0002791,6.87e-29,29;UBERON:0001893,6.87e-29,29;UBERON:0001016,1.42e-28,75;UBERON:0000955,1.98e-24,47;UBERON:0006238,1.98e-24,47;UBERON:0003080,2.74e-24,40;UBERON:0002780,3.77e-23,39;UBERON:0001890,3.77e-23,39;UBERON:0006240,3.77e-23,39;UBERON:0002616,3.93e-23,46;UBERON:0000956,6.08e-21,21;UBERON:0001869,6.08e-21,21;UBERON:0000203,6.08e-21,21;UBERON:0010314,6.69e-21,92;UBERON:0002619,1.40e-15,17;UBERON:0002021,2.75e-14,10;UBERON:0000411,2.75e-14,10;UBERON:0001950,2.75e-14,10;UBERON:0002420,6.25e-09,8;UBERON:0007245,6.25e-09,8;UBERON:0010009,6.25e-09,8;UBERON:0010011,6.25e-09,8;UBERON:0000454,6.25e-09,8;UBERON:0000369,2.32e-08,5;UBERON:0002435,2.32e-08,5;UBERON:0000204,2.32e-08,5;UBERON:0010082,2.32e-08,5;UBERON:0002240,2.47e-08,6;UBERON:0005174,2.47e-08,6;UBERON:0001137,2.47e-08,6;UBERON:0000970,3.47e-08,9;UBERON:0000019,3.47e-08,9;UBERON:0000047,3.47e-08,9;UBERON:0010312,3.47e-08,9;UBERON:0004088,3.47e-08,9;UBERON:0002104,3.47e-08,9;UBERON:0001456,3.47e-08,9;UBERON:0003072,3.47e-08,9;UBERON:0004128,3.47e-08,9;UBERON:0003071,3.47e-08,9;UBERON:0000025,4.27e-08,114;UBERON:0001948,1.84e-07,5;UBERON:0002315,1.84e-07,5;UBERON:0004111,5.83e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,13.7575193384526,18.5146842745212,10.775133859605,0,0,0,0,0,0.299600110518405,0,7.67303131082735,10.8004750665353,7.36137364729837,5.71301968807607,5.07997644188711,11.0241719293459,9.4887016308054,17.4651569455904,4.40463523997555,5.36286819957788,4.30098293117482,11.2103344570665,10.8870295886867,8.33461392890816,2.79182999001381,0,2.90316670775939,1.76777151284201,6.54909731675874,6.52398060388552,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,4.19413790333504,2.74500361691176,6.91098936620754,3.65031072403781,2.55715457330331,3.1168206683934,4.54275536589721,0,0,0,0.210441855886474,2.47228841629137,3.44853156650209,2.88099407688559,2.41127708537144,3.33378845841506,2.8185018462667,1.49922759295566,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,2.36680608472354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.99259867206745,0,0,0,0,0,0,0,0,0,0.292255857911312,0,8.67567554338879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,6.90487854760765,5.15605962095457,5.499301834998,2.05524755931193,9.82012066606611,8.77529250301348,4.95353323546643,5.89085131679466,6.73088405277366,1.14166082342594,2.79317411380722,2.39027048055788,0.486213434136588,1.25767897576789,0.183843508450014,1.11123363900808,0.618105171716683,0.962757628775446,1.51618327058278,0.760437899670719,0.754505365544305,0.842773567228942,0.960377286073039,1.14870937911227,0.952587382566147,0.695305955669133,0.578727661391115,1.64834360321323,1.17759136107518,1.71434626192708,0.354951612318675,0.715308569841963,0.872078499793971,1.12931256498397,0.507687647350059,0.73171189149109,0.263069711437843,1.08643291076689,1.12228454331548,0.237270036248348,0.591026894253381,0.409231043169689,0.77468420592983,0.964533054905707,2.74791635731741,0.701794825336225,0.859484216193193,0.191288332068843,0,0.231867835620421 | |||
|short_description=p3@2610100L16Rik | |||
}} |
Revision as of 01:56, 14 September 2013
Short description: | p3@2610100L16Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_2610100L16Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 130bp_to_NR_033490, uc008orj.2_5end |
EntrezGene: | 2610100L16Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.52e-30 | 23 |
neuroblast (sensu Vertebrata) | 7.52e-30 | 23 |
neuron | 1.18e-18 | 33 |
neuronal stem cell | 1.18e-18 | 33 |
neuroblast | 1.18e-18 | 33 |
electrically signaling cell | 1.18e-18 | 33 |
electrically responsive cell | 9.88e-15 | 39 |
electrically active cell | 9.88e-15 | 39 |
neural cell | 9.67e-13 | 43 |
ectodermal cell | 2.66e-12 | 44 |
neurectodermal cell | 2.66e-12 | 44 |
neuron of cerebral cortex | 2.07e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.