FFCP PHASE1:Mm9::chr3:54719736..54719749,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=329641|HGNC=|MCL_coexpression_id=708|UniProt=Q8CD78|association_with_transcript=59bp_to_ENSMUST00000070342,NM_177854,uc008pfx.2_5end|description=CAGE_peak_3_at_6030405A18Rik_5end|id=chr3:54719736..54719749,-|ontology_enrichment_celltype=CL:0000117!2.58e-16!23;CL:0000337!2.58e-16!23;CL:0000540!1.47e-12!33;CL:0000047!1.47e-12!33;CL:0000031!1.47e-12!33;CL:0000404!1.47e-12!33;CL:0000393!4.29e-09!39;CL:0000211!4.29e-09!39;CL:0000221!2.10e-08!44;CL:0000133!2.10e-08!44;CL:0002319!6.73e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.20e-19,23;CL:0000337,3.20e-19,23;CL:0000540,1.71e-12,33;CL:0000047,1.71e-12,33;CL:0000031,1.71e-12,33;CL:0000404,1.71e-12,33;CL:0000393,4.03e-10,39;CL:0000211,4.03e-10,39;CL:0002319,6.54e-09,43;CL:0000120,1.05e-08,3;CL:0000221,1.21e-08,44;CL:0000133,1.21e-08,44;CL:0002613,1.34e-08,3;CL:0002614,6.56e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.31e-24!73;UBERON:0005743!2.31e-24!73;UBERON:0001049!2.99e-24!52;UBERON:0005068!2.99e-24!52;UBERON:0006241!2.99e-24!52;UBERON:0007135!2.99e-24!52;UBERON:0000073!7.32e-24!75;UBERON:0001016!7.32e-24!75;UBERON:0000955!7.15e-23!50;UBERON:0006238!7.15e-23!50;UBERON:0002020!9.00e-23!34;UBERON:0000033!1.75e-22!63;UBERON:0002616!3.80e-22!49;UBERON:0003080!3.69e-21!40;UBERON:0002780!1.87e-20!39;UBERON:0001890!1.87e-20!39;UBERON:0006240!1.87e-20!39;UBERON:0002346!2.41e-20!71;UBERON:0003075!2.41e-20!71;UBERON:0007284!2.41e-20!71;UBERON:0003056!2.07e-19!49;UBERON:0002791!4.19e-19!29;UBERON:0003528!4.19e-19!29;UBERON:0001893!4.19e-19!29;UBERON:0004121!3.25e-18!102;UBERON:0000924!3.25e-18!102;UBERON:0006601!3.25e-18!102;UBERON:0000956!7.51e-13!21;UBERON:0001869!7.51e-13!21;UBERON:0000203!7.51e-13!21;UBERON:0007811!2.03e-11!86;UBERON:0002619!4.80e-11!17;UBERON:0002021!4.41e-10!10;UBERON:0000411!4.41e-10!10;UBERON:0001950!4.41e-10!10;UBERON:0000025!7.67e-10!114;UBERON:0004111!9.98e-10!122;UBERON:0000153!1.45e-09!94;UBERON:0002420!1.51e-07!8;UBERON:0007245!1.51e-07!8;UBERON:0010009!1.51e-07!8;UBERON:0010011!1.51e-07!8;UBERON:0000454!1.51e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.35e-41,34;UBERON:0003528,1.17e-37,29;UBERON:0002791,1.17e-37,29;UBERON:0001893,1.17e-37,29;UBERON:0000073,6.27e-34,54;UBERON:0002780,2.47e-32,39;UBERON:0001890,2.47e-32,39;UBERON:0006240,2.47e-32,39;UBERON:0003080,2.13e-31,40;UBERON:0001049,4.12e-30,52;UBERON:0005068,4.12e-30,52;UBERON:0006241,4.12e-30,52;UBERON:0007135,4.12e-30,52;UBERON:0001017,5.34e-30,73;UBERON:0001016,4.89e-29,75;UBERON:0002021,8.43e-27,10;UBERON:0000411,8.43e-27,10;UBERON:0001950,8.43e-27,10;UBERON:0002616,1.23e-26,46;UBERON:0000955,5.84e-26,47;UBERON:0006238,5.84e-26,47;UBERON:0003056,1.08e-24,49;UBERON:0002346,2.02e-23,64;UBERON:0003075,2.02e-23,64;UBERON:0007284,2.02e-23,64;UBERON:0002619,3.90e-22,17;UBERON:0004121,1.22e-21,95;UBERON:0000924,1.22e-21,95;UBERON:0006601,1.22e-21,95;UBERON:0000956,1.09e-20,21;UBERON:0001869,1.09e-20,21;UBERON:0000203,1.09e-20,21;UBERON:0010371,7.63e-20,73;UBERON:0002420,2.74e-19,8;UBERON:0007245,2.74e-19,8;UBERON:0010009,2.74e-19,8;UBERON:0010011,2.74e-19,8;UBERON:0000454,2.74e-19,8;UBERON:0010314,1.38e-14,92;UBERON:0000369,5.64e-13,5;UBERON:0002435,5.64e-13,5;UBERON:0000204,5.64e-13,5;UBERON:0010082,5.64e-13,5;UBERON:0000025,8.75e-12,114;UBERON:0004111,1.24e-10,122;UBERON:0011216,4.85e-09,194;UBERON:0002038,6.56e-08,3;UBERON:0009663,6.56e-08,3;UBERON:0009661,6.56e-08,3;UBERON:0000125,6.56e-08,3;UBERON:0002308,6.56e-08,3|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,5.81890077199236,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.420649922702764,0.571301968807607,1.10434270475807,0.489963196859816,0.479227355091182,0.919218786610021,2.20231761998777,1.14918604276669,0.614426133024974,1.45074916503213,1.55528994124096,2.6045668527838,1.11673199600552,1.12552522006336,1.68078072554491,2.06240009831567,1.99320353118744,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0.510914110417183,0,0,0,0.898743836428936,1.83000241127451,1.13088916901578,3.47648640384553,2.30143911597297,0.83115217823824,1.62241263067758,0.101839363850316,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.468508622798644,0.776110112217047,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,6.09840850835969,5.76265829323993,0,0,0,0.464473343720877,0.257734922644187,0.80673409849337,0.667134131534611,0.760902504450237,0,0.329397909448022,0.502670417600539,0.596869416123452,1.16978452271472,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0.500535317148282,0.393117990226406,0.224862112384854,1.21716072833102,0.72353147925725,0.50925170356284,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.703270119553219,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.428674070063185,1.06404140185364,0.713475270408282,0.822745103010605,0,0,0,0,0,0,0,0,0,0.291480836629851,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0.165458490457098,0.388902376688095,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0,0,0,0,0,1.6942555278512,2.76195141904306,1.14579102687879,3.43706364687375,4.11049511862385,3.0215755895588,2.70009000092722,2.2516060161211,3.17199686288943,2.5888015587591,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.551530525350042,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.0941093804153306,0.25384382367503,0.548783918618318,0.263069711437843,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0,0,0|short_description=p3@6030405A18Rik}} | ||
|EntrezGene=329641 | |||
|HGNC= | |||
|MCL_coexpression_id=708 | |||
|UniProt=Q8CD78 | |||
|association_with_transcript=59bp_to_ENSMUST00000070342,NM_177854,uc008pfx.2_5end | |||
|description=CAGE_peak_3_at_6030405A18Rik_5end | |||
|id=chr3:54719736..54719749,- | |||
|ontology_enrichment_celltype=CL:0000117!2.58e-16!23;CL:0000337!2.58e-16!23;CL:0000540!1.47e-12!33;CL:0000047!1.47e-12!33;CL:0000031!1.47e-12!33;CL:0000404!1.47e-12!33;CL:0000393!4.29e-09!39;CL:0000211!4.29e-09!39;CL:0000221!2.10e-08!44;CL:0000133!2.10e-08!44;CL:0002319!6.73e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.20e-19,23;CL:0000337,3.20e-19,23;CL:0000540,1.71e-12,33;CL:0000047,1.71e-12,33;CL:0000031,1.71e-12,33;CL:0000404,1.71e-12,33;CL:0000393,4.03e-10,39;CL:0000211,4.03e-10,39;CL:0002319,6.54e-09,43;CL:0000120,1.05e-08,3;CL:0000221,1.21e-08,44;CL:0000133,1.21e-08,44;CL:0002613,1.34e-08,3;CL:0002614,6.56e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.31e-24!73;UBERON:0005743!2.31e-24!73;UBERON:0001049!2.99e-24!52;UBERON:0005068!2.99e-24!52;UBERON:0006241!2.99e-24!52;UBERON:0007135!2.99e-24!52;UBERON:0000073!7.32e-24!75;UBERON:0001016!7.32e-24!75;UBERON:0000955!7.15e-23!50;UBERON:0006238!7.15e-23!50;UBERON:0002020!9.00e-23!34;UBERON:0000033!1.75e-22!63;UBERON:0002616!3.80e-22!49;UBERON:0003080!3.69e-21!40;UBERON:0002780!1.87e-20!39;UBERON:0001890!1.87e-20!39;UBERON:0006240!1.87e-20!39;UBERON:0002346!2.41e-20!71;UBERON:0003075!2.41e-20!71;UBERON:0007284!2.41e-20!71;UBERON:0003056!2.07e-19!49;UBERON:0002791!4.19e-19!29;UBERON:0003528!4.19e-19!29;UBERON:0001893!4.19e-19!29;UBERON:0004121!3.25e-18!102;UBERON:0000924!3.25e-18!102;UBERON:0006601!3.25e-18!102;UBERON:0000956!7.51e-13!21;UBERON:0001869!7.51e-13!21;UBERON:0000203!7.51e-13!21;UBERON:0007811!2.03e-11!86;UBERON:0002619!4.80e-11!17;UBERON:0002021!4.41e-10!10;UBERON:0000411!4.41e-10!10;UBERON:0001950!4.41e-10!10;UBERON:0000025!7.67e-10!114;UBERON:0004111!9.98e-10!122;UBERON:0000153!1.45e-09!94;UBERON:0002420!1.51e-07!8;UBERON:0007245!1.51e-07!8;UBERON:0010009!1.51e-07!8;UBERON:0010011!1.51e-07!8;UBERON:0000454!1.51e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.35e-41,34;UBERON:0003528,1.17e-37,29;UBERON:0002791,1.17e-37,29;UBERON:0001893,1.17e-37,29;UBERON:0000073,6.27e-34,54;UBERON:0002780,2.47e-32,39;UBERON:0001890,2.47e-32,39;UBERON:0006240,2.47e-32,39;UBERON:0003080,2.13e-31,40;UBERON:0001049,4.12e-30,52;UBERON:0005068,4.12e-30,52;UBERON:0006241,4.12e-30,52;UBERON:0007135,4.12e-30,52;UBERON:0001017,5.34e-30,73;UBERON:0001016,4.89e-29,75;UBERON:0002021,8.43e-27,10;UBERON:0000411,8.43e-27,10;UBERON:0001950,8.43e-27,10;UBERON:0002616,1.23e-26,46;UBERON:0000955,5.84e-26,47;UBERON:0006238,5.84e-26,47;UBERON:0003056,1.08e-24,49;UBERON:0002346,2.02e-23,64;UBERON:0003075,2.02e-23,64;UBERON:0007284,2.02e-23,64;UBERON:0002619,3.90e-22,17;UBERON:0004121,1.22e-21,95;UBERON:0000924,1.22e-21,95;UBERON:0006601,1.22e-21,95;UBERON:0000956,1.09e-20,21;UBERON:0001869,1.09e-20,21;UBERON:0000203,1.09e-20,21;UBERON:0010371,7.63e-20,73;UBERON:0002420,2.74e-19,8;UBERON:0007245,2.74e-19,8;UBERON:0010009,2.74e-19,8;UBERON:0010011,2.74e-19,8;UBERON:0000454,2.74e-19,8;UBERON:0010314,1.38e-14,92;UBERON:0000369,5.64e-13,5;UBERON:0002435,5.64e-13,5;UBERON:0000204,5.64e-13,5;UBERON:0010082,5.64e-13,5;UBERON:0000025,8.75e-12,114;UBERON:0004111,1.24e-10,122;UBERON:0011216,4.85e-09,194;UBERON:0002038,6.56e-08,3;UBERON:0009663,6.56e-08,3;UBERON:0009661,6.56e-08,3;UBERON:0000125,6.56e-08,3;UBERON:0002308,6.56e-08,3 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,5.81890077199236,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.420649922702764,0.571301968807607,1.10434270475807,0.489963196859816,0.479227355091182,0.919218786610021,2.20231761998777,1.14918604276669,0.614426133024974,1.45074916503213,1.55528994124096,2.6045668527838,1.11673199600552,1.12552522006336,1.68078072554491,2.06240009831567,1.99320353118744,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0.510914110417183,0,0,0,0.898743836428936,1.83000241127451,1.13088916901578,3.47648640384553,2.30143911597297,0.83115217823824,1.62241263067758,0.101839363850316,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.468508622798644,0.776110112217047,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,6.09840850835969,5.76265829323993,0,0,0,0.464473343720877,0.257734922644187,0.80673409849337,0.667134131534611,0.760902504450237,0,0.329397909448022,0.502670417600539,0.596869416123452,1.16978452271472,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0.500535317148282,0.393117990226406,0.224862112384854,1.21716072833102,0.72353147925725,0.50925170356284,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.703270119553219,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.428674070063185,1.06404140185364,0.713475270408282,0.822745103010605,0,0,0,0,0,0,0,0,0,0.291480836629851,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0.165458490457098,0.388902376688095,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0,0,0,0,0,1.6942555278512,2.76195141904306,1.14579102687879,3.43706364687375,4.11049511862385,3.0215755895588,2.70009000092722,2.2516060161211,3.17199686288943,2.5888015587591,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.551530525350042,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.0941093804153306,0.25384382367503,0.548783918618318,0.263069711437843,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0,0,0 | |||
|short_description=p3@6030405A18Rik | |||
}} |
Revision as of 02:18, 14 September 2013
Short description: | p3@6030405A18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_6030405A18Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:708 |
Association with transcript: | 59bp_to_ENSMUST00000070342, NM_177854, uc008pfx.2_5end |
EntrezGene: | 6030405A18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.20e-19 | 23 |
neuroblast (sensu Vertebrata) | 3.20e-19 | 23 |
neuron | 1.71e-12 | 33 |
neuronal stem cell | 1.71e-12 | 33 |
neuroblast | 1.71e-12 | 33 |
electrically signaling cell | 1.71e-12 | 33 |
electrically responsive cell | 4.03e-10 | 39 |
electrically active cell | 4.03e-10 | 39 |
neural cell | 6.54e-09 | 43 |
granule cell | 1.05e-08 | 3 |
ectodermal cell | 1.21e-08 | 44 |
neurectodermal cell | 1.21e-08 | 44 |
striatum neuron | 1.34e-08 | 3 |
neuron of the substantia nigra | 6.56e-08 | 3 |
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