FFCP PHASE1:Mm9::chr6:144997121..144997162,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12035|HGNC=|MCL_coexpression_id=20|UniProt=F8WIH8|association_with_transcript=169bp_to_ENSMUST00000087468_5end|description=CAGE_peak_5_at_Bcat1_5end|id=chr6:144997121..144997162,-|ontology_enrichment_celltype=CL:0000117!4.79e-16!23;CL:0000337!4.79e-16!23;CL:0000540!2.08e-14!33;CL:0000047!2.08e-14!33;CL:0000031!2.08e-14!33;CL:0000404!2.08e-14!33;CL:0000221!5.93e-13!44;CL:0000133!5.93e-13!44;CL:0002319!7.12e-13!43;CL:0000393!3.88e-11!39;CL:0000211!3.88e-11!39;CL:0000055!6.73e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-25,23;CL:0000337,1.19e-25,23;CL:0000540,7.17e-16,33;CL:0000047,7.17e-16,33;CL:0000031,7.17e-16,33;CL:0000404,7.17e-16,33;CL:0002319,3.81e-14,43;CL:0000221,1.15e-13,44;CL:0000133,1.15e-13,44;CL:0000393,1.87e-12,39;CL:0000211,1.87e-12,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.58e-33!71;UBERON:0003075!1.58e-33!71;UBERON:0007284!1.58e-33!71;UBERON:0001017!3.77e-33!73;UBERON:0005743!3.77e-33!73;UBERON:0000033!8.11e-33!63;UBERON:0000073!1.24e-32!75;UBERON:0001016!1.24e-32!75;UBERON:0004121!3.26e-32!102;UBERON:0000924!3.26e-32!102;UBERON:0006601!3.26e-32!102;UBERON:0001049!1.25e-30!52;UBERON:0005068!1.25e-30!52;UBERON:0006241!1.25e-30!52;UBERON:0007135!1.25e-30!52;UBERON:0000955!2.03e-29!50;UBERON:0006238!2.03e-29!50;UBERON:0002616!1.52e-28!49;UBERON:0003056!8.48e-28!49;UBERON:0002020!2.71e-23!34;UBERON:0003080!6.00e-23!40;UBERON:0002780!4.70e-22!39;UBERON:0001890!4.70e-22!39;UBERON:0006240!4.70e-22!39;UBERON:0002791!1.21e-19!29;UBERON:0003528!1.21e-19!29;UBERON:0001893!1.21e-19!29;UBERON:0007811!4.37e-17!86;UBERON:0000153!2.53e-14!94;UBERON:0000956!6.05e-14!21;UBERON:0001869!6.05e-14!21;UBERON:0000203!6.05e-14!21;UBERON:0002619!8.39e-12!17;UBERON:0002021!2.62e-08!10;UBERON:0000411!2.62e-08!10;UBERON:0001950!2.62e-08!10;UBERON:0003076!5.21e-08!12;UBERON:0003057!5.21e-08!12;UBERON:0004111!1.77e-07!122;UBERON:0000025!3.24e-07!114;UBERON:0002420!6.73e-07!8;UBERON:0007245!6.73e-07!8;UBERON:0010009!6.73e-07!8;UBERON:0010011!6.73e-07!8;UBERON:0000454!6.73e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.59e-50,64;UBERON:0003075,4.59e-50,64;UBERON:0007284,4.59e-50,64;UBERON:0000073,6.67e-49,54;UBERON:0001049,1.14e-45,52;UBERON:0005068,1.14e-45,52;UBERON:0006241,1.14e-45,52;UBERON:0007135,1.14e-45,52;UBERON:0001017,1.26e-42,73;UBERON:0010371,3.75e-42,73;UBERON:0004121,1.38e-41,95;UBERON:0000924,1.38e-41,95;UBERON:0006601,1.38e-41,95;UBERON:0001016,4.10e-41,75;UBERON:0000955,9.27e-39,47;UBERON:0006238,9.27e-39,47;UBERON:0002020,9.43e-39,34;UBERON:0003056,1.37e-38,49;UBERON:0002616,2.77e-37,46;UBERON:0003528,3.62e-32,29;UBERON:0002791,3.62e-32,29;UBERON:0001893,3.62e-32,29;UBERON:0003080,1.26e-31,40;UBERON:0010314,1.53e-30,92;UBERON:0002780,4.17e-30,39;UBERON:0001890,4.17e-30,39;UBERON:0006240,4.17e-30,39;UBERON:0000956,6.43e-22,21;UBERON:0001869,6.43e-22,21;UBERON:0000203,6.43e-22,21;UBERON:0002619,4.89e-18,17;UBERON:0000025,4.99e-14,114;UBERON:0003076,8.58e-14,12;UBERON:0003057,8.58e-14,12;UBERON:0002021,9.47e-14,10;UBERON:0000411,9.47e-14,10;UBERON:0001950,9.47e-14,10;UBERON:0004111,2.53e-12,122;UBERON:0002420,3.25e-11,8;UBERON:0007245,3.25e-11,8;UBERON:0010009,3.25e-11,8;UBERON:0010011,3.25e-11,8;UBERON:0000454,3.25e-11,8;UBERON:0000483,1.12e-09,174;UBERON:0000119,2.04e-09,176;UBERON:0002240,4.66e-09,6;UBERON:0005174,4.66e-09,6;UBERON:0001137,4.66e-09,6;UBERON:0001948,1.57e-07,5;UBERON:0002315,1.57e-07,5;UBERON:0002950,1.77e-07,4;UBERON:0001891,1.77e-07,4;UBERON:0009616,1.77e-07,4;UBERON:0010286,1.77e-07,4;UBERON:0011216,1.79e-07,194;UBERON:0000970,2.41e-07,9;UBERON:0000019,2.41e-07,9;UBERON:0000047,2.41e-07,9;UBERON:0010312,2.41e-07,9;UBERON:0004088,2.41e-07,9;UBERON:0002104,2.41e-07,9;UBERON:0001456,2.41e-07,9;UBERON:0003072,2.41e-07,9;UBERON:0004128,2.41e-07,9;UBERON:0003071,2.41e-07,9;UBERON:0000369,7.10e-07,5;UBERON:0002435,7.10e-07,5;UBERON:0000204,7.10e-07,5;UBERON:0010082,7.10e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,1.09843091367236,1.74986909166855,0.699932108126813,0,0,0,0,0,0,0.515672092277442,5.46254444320914,4.23192783417626,3.1691570175309,0,0,0,0,0,0,0,1.45165457231869,1.08004750665353,1.68259969081106,9.14083150092171,5.74258206474195,1.83736198822431,0.766763768145891,2.75765635983006,28.6301290598411,28.3465890549117,31.0285197177612,4.48413378282659,3.38504281328916,3.12548022334056,36.8521558681823,25.8870800614573,22.7669389187447,6.77645746589436,8.11518580554887,6.15118171223492,0,0.529000920747499,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.608930956624282,0,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,6.73395833126558,9.00620839297857,0,0,0,0,35.0510096207285,11.4375150704657,1.88481528169297,12.8629996942285,8.95004100656157,27.6358099264215,18.8199865158599,0,0.124406970610093,0,2.94618598241064,1.04096354370163,1.37941262660084,1.0803727788321,0.60281927134286,1.49680298132921,1.92170580427275,1.3118241438362,5.95017752699736,0,0.567318240503458,0,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0.134206418760372,9.67333763394985,1.54356918568927,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.210407459670956,0,0.295220295959204,0.470996183524124,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,50.0917840761911,47.8223681296189,0,0.252470927204373,0.631016438832513,0,0.861693590931196,0,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,14.1381379225595,1.56134093729095,0.35613120733451,0.325773918707152,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0.36012218806262,0.388076051348264,0,0.177340233642274,0.713475270408282,0.658196082408484,2.13125464380219,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0,37.2704857041124,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0.418176592028937,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.579568782096571,0.750729901804728,0.73260649706906,0.857473516316263,0,7.34177395402186,4.60325236507177,6.30185064783336,6.53042092906013,5.48066015816514,9.06472676867641,8.10027000278167,14.8605997063993,13.1411298605419,8.80192529978094,1.03787347584177,0.798049746802062,0.682934423016537,0.243106717068294,0.628839487883947,1.10306105070008,0.666740183404846,0.412070114477788,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.655490552289177,0.448176066834085,0.34461281373368,0.476293691283074,0.347652977834566,0.77163688185482,0.412085900803307,0.441596760403192,0.342869252385415,0,0.715308569841963,0.581385666529314,0.658765662907314,0.507687647350059,0.73171189149109,0.263069711437843,0.543216455383447,1.12228454331548,0.355905054372522,0.492522411877817,1.22769312950907,0.309873682371932,0.385813221962283,1.74867404556562,0.467863216890817,0.644613162144895,0,0.441182838239031,0.231867835620421|short_description=p5@Bcat1}} | ||
|EntrezGene=12035 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=F8WIH8 | |||
|association_with_transcript=169bp_to_ENSMUST00000087468_5end | |||
|description=CAGE_peak_5_at_Bcat1_5end | |||
|id=chr6:144997121..144997162,- | |||
|ontology_enrichment_celltype=CL:0000117!4.79e-16!23;CL:0000337!4.79e-16!23;CL:0000540!2.08e-14!33;CL:0000047!2.08e-14!33;CL:0000031!2.08e-14!33;CL:0000404!2.08e-14!33;CL:0000221!5.93e-13!44;CL:0000133!5.93e-13!44;CL:0002319!7.12e-13!43;CL:0000393!3.88e-11!39;CL:0000211!3.88e-11!39;CL:0000055!6.73e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-25,23;CL:0000337,1.19e-25,23;CL:0000540,7.17e-16,33;CL:0000047,7.17e-16,33;CL:0000031,7.17e-16,33;CL:0000404,7.17e-16,33;CL:0002319,3.81e-14,43;CL:0000221,1.15e-13,44;CL:0000133,1.15e-13,44;CL:0000393,1.87e-12,39;CL:0000211,1.87e-12,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.58e-33!71;UBERON:0003075!1.58e-33!71;UBERON:0007284!1.58e-33!71;UBERON:0001017!3.77e-33!73;UBERON:0005743!3.77e-33!73;UBERON:0000033!8.11e-33!63;UBERON:0000073!1.24e-32!75;UBERON:0001016!1.24e-32!75;UBERON:0004121!3.26e-32!102;UBERON:0000924!3.26e-32!102;UBERON:0006601!3.26e-32!102;UBERON:0001049!1.25e-30!52;UBERON:0005068!1.25e-30!52;UBERON:0006241!1.25e-30!52;UBERON:0007135!1.25e-30!52;UBERON:0000955!2.03e-29!50;UBERON:0006238!2.03e-29!50;UBERON:0002616!1.52e-28!49;UBERON:0003056!8.48e-28!49;UBERON:0002020!2.71e-23!34;UBERON:0003080!6.00e-23!40;UBERON:0002780!4.70e-22!39;UBERON:0001890!4.70e-22!39;UBERON:0006240!4.70e-22!39;UBERON:0002791!1.21e-19!29;UBERON:0003528!1.21e-19!29;UBERON:0001893!1.21e-19!29;UBERON:0007811!4.37e-17!86;UBERON:0000153!2.53e-14!94;UBERON:0000956!6.05e-14!21;UBERON:0001869!6.05e-14!21;UBERON:0000203!6.05e-14!21;UBERON:0002619!8.39e-12!17;UBERON:0002021!2.62e-08!10;UBERON:0000411!2.62e-08!10;UBERON:0001950!2.62e-08!10;UBERON:0003076!5.21e-08!12;UBERON:0003057!5.21e-08!12;UBERON:0004111!1.77e-07!122;UBERON:0000025!3.24e-07!114;UBERON:0002420!6.73e-07!8;UBERON:0007245!6.73e-07!8;UBERON:0010009!6.73e-07!8;UBERON:0010011!6.73e-07!8;UBERON:0000454!6.73e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.59e-50,64;UBERON:0003075,4.59e-50,64;UBERON:0007284,4.59e-50,64;UBERON:0000073,6.67e-49,54;UBERON:0001049,1.14e-45,52;UBERON:0005068,1.14e-45,52;UBERON:0006241,1.14e-45,52;UBERON:0007135,1.14e-45,52;UBERON:0001017,1.26e-42,73;UBERON:0010371,3.75e-42,73;UBERON:0004121,1.38e-41,95;UBERON:0000924,1.38e-41,95;UBERON:0006601,1.38e-41,95;UBERON:0001016,4.10e-41,75;UBERON:0000955,9.27e-39,47;UBERON:0006238,9.27e-39,47;UBERON:0002020,9.43e-39,34;UBERON:0003056,1.37e-38,49;UBERON:0002616,2.77e-37,46;UBERON:0003528,3.62e-32,29;UBERON:0002791,3.62e-32,29;UBERON:0001893,3.62e-32,29;UBERON:0003080,1.26e-31,40;UBERON:0010314,1.53e-30,92;UBERON:0002780,4.17e-30,39;UBERON:0001890,4.17e-30,39;UBERON:0006240,4.17e-30,39;UBERON:0000956,6.43e-22,21;UBERON:0001869,6.43e-22,21;UBERON:0000203,6.43e-22,21;UBERON:0002619,4.89e-18,17;UBERON:0000025,4.99e-14,114;UBERON:0003076,8.58e-14,12;UBERON:0003057,8.58e-14,12;UBERON:0002021,9.47e-14,10;UBERON:0000411,9.47e-14,10;UBERON:0001950,9.47e-14,10;UBERON:0004111,2.53e-12,122;UBERON:0002420,3.25e-11,8;UBERON:0007245,3.25e-11,8;UBERON:0010009,3.25e-11,8;UBERON:0010011,3.25e-11,8;UBERON:0000454,3.25e-11,8;UBERON:0000483,1.12e-09,174;UBERON:0000119,2.04e-09,176;UBERON:0002240,4.66e-09,6;UBERON:0005174,4.66e-09,6;UBERON:0001137,4.66e-09,6;UBERON:0001948,1.57e-07,5;UBERON:0002315,1.57e-07,5;UBERON:0002950,1.77e-07,4;UBERON:0001891,1.77e-07,4;UBERON:0009616,1.77e-07,4;UBERON:0010286,1.77e-07,4;UBERON:0011216,1.79e-07,194;UBERON:0000970,2.41e-07,9;UBERON:0000019,2.41e-07,9;UBERON:0000047,2.41e-07,9;UBERON:0010312,2.41e-07,9;UBERON:0004088,2.41e-07,9;UBERON:0002104,2.41e-07,9;UBERON:0001456,2.41e-07,9;UBERON:0003072,2.41e-07,9;UBERON:0004128,2.41e-07,9;UBERON:0003071,2.41e-07,9;UBERON:0000369,7.10e-07,5;UBERON:0002435,7.10e-07,5;UBERON:0000204,7.10e-07,5;UBERON:0010082,7.10e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,1.09843091367236,1.74986909166855,0.699932108126813,0,0,0,0,0,0,0.515672092277442,5.46254444320914,4.23192783417626,3.1691570175309,0,0,0,0,0,0,0,1.45165457231869,1.08004750665353,1.68259969081106,9.14083150092171,5.74258206474195,1.83736198822431,0.766763768145891,2.75765635983006,28.6301290598411,28.3465890549117,31.0285197177612,4.48413378282659,3.38504281328916,3.12548022334056,36.8521558681823,25.8870800614573,22.7669389187447,6.77645746589436,8.11518580554887,6.15118171223492,0,0.529000920747499,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.608930956624282,0,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,6.73395833126558,9.00620839297857,0,0,0,0,35.0510096207285,11.4375150704657,1.88481528169297,12.8629996942285,8.95004100656157,27.6358099264215,18.8199865158599,0,0.124406970610093,0,2.94618598241064,1.04096354370163,1.37941262660084,1.0803727788321,0.60281927134286,1.49680298132921,1.92170580427275,1.3118241438362,5.95017752699736,0,0.567318240503458,0,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0.134206418760372,9.67333763394985,1.54356918568927,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.210407459670956,0,0.295220295959204,0.470996183524124,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,50.0917840761911,47.8223681296189,0,0.252470927204373,0.631016438832513,0,0.861693590931196,0,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,14.1381379225595,1.56134093729095,0.35613120733451,0.325773918707152,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0.36012218806262,0.388076051348264,0,0.177340233642274,0.713475270408282,0.658196082408484,2.13125464380219,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0,37.2704857041124,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0.418176592028937,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.579568782096571,0.750729901804728,0.73260649706906,0.857473516316263,0,7.34177395402186,4.60325236507177,6.30185064783336,6.53042092906013,5.48066015816514,9.06472676867641,8.10027000278167,14.8605997063993,13.1411298605419,8.80192529978094,1.03787347584177,0.798049746802062,0.682934423016537,0.243106717068294,0.628839487883947,1.10306105070008,0.666740183404846,0.412070114477788,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.655490552289177,0.448176066834085,0.34461281373368,0.476293691283074,0.347652977834566,0.77163688185482,0.412085900803307,0.441596760403192,0.342869252385415,0,0.715308569841963,0.581385666529314,0.658765662907314,0.507687647350059,0.73171189149109,0.263069711437843,0.543216455383447,1.12228454331548,0.355905054372522,0.492522411877817,1.22769312950907,0.309873682371932,0.385813221962283,1.74867404556562,0.467863216890817,0.644613162144895,0,0.441182838239031,0.231867835620421 | |||
|short_description=p5@Bcat1 | |||
}} |
Revision as of 09:20, 14 September 2013
Short description: | p5@Bcat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Bcat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 169bp_to_ENSMUST00000087468_5end |
EntrezGene: | Bcat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.19e-25 | 23 |
neuroblast (sensu Vertebrata) | 1.19e-25 | 23 |
neuron | 7.17e-16 | 33 |
neuronal stem cell | 7.17e-16 | 33 |
neuroblast | 7.17e-16 | 33 |
electrically signaling cell | 7.17e-16 | 33 |
neural cell | 3.81e-14 | 43 |
ectodermal cell | 1.15e-13 | 44 |
neurectodermal cell | 1.15e-13 | 44 |
electrically responsive cell | 1.87e-12 | 39 |
electrically active cell | 1.87e-12 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.