FFCP PHASE1:Mm9::chr6:72908417..72908423,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19240|HGNC=|MCL_coexpression_id=60|UniProt=|association_with_transcript=-24bp_to_ENSMUST00000144337_5end|description=CAGE_peak_5_at_Tmsb10_5end|id=chr6:72908417..72908423,-|ontology_enrichment_celltype=CL:0000117!2.22e-14!23;CL:0000337!2.22e-14!23;CL:0002319!5.02e-12!43;CL:0000540!7.79e-12!33;CL:0000047!7.79e-12!33;CL:0000031!7.79e-12!33;CL:0000404!7.79e-12!33;CL:0000393!2.40e-11!39;CL:0000211!2.40e-11!39;CL:0000221!2.62e-11!44;CL:0000133!2.62e-11!44;CL:0000055!5.67e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.58e-23,23;CL:0000337,5.58e-23,23;CL:0000540,8.42e-15,33;CL:0000047,8.42e-15,33;CL:0000031,8.42e-15,33;CL:0000404,8.42e-15,33;CL:0002319,9.39e-15,43;CL:0000221,3.46e-14,44;CL:0000133,3.46e-14,44;CL:0000393,1.98e-13,39;CL:0000211,1.98e-13,39;CL:0000034,6.65e-10,97;CL:0000723,3.50e-09,91;CL:0000048,3.50e-09,91;CL:0002321,9.91e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.69e-20!73;UBERON:0005743!8.69e-20!73;UBERON:0000073!1.41e-19!75;UBERON:0001016!1.41e-19!75;UBERON:0001049!1.07e-17!52;UBERON:0005068!1.07e-17!52;UBERON:0006241!1.07e-17!52;UBERON:0007135!1.07e-17!52;UBERON:0000955!3.92e-16!50;UBERON:0006238!3.92e-16!50;UBERON:0002616!6.09e-16!49;UBERON:0002020!1.69e-15!34;UBERON:0002346!8.67e-15!71;UBERON:0003075!8.67e-15!71;UBERON:0007284!8.67e-15!71;UBERON:0000033!5.49e-14!63;UBERON:0004121!1.93e-13!102;UBERON:0000924!1.93e-13!102;UBERON:0006601!1.93e-13!102;UBERON:0002791!2.65e-12!29;UBERON:0003528!2.65e-12!29;UBERON:0001893!2.65e-12!29;UBERON:0003056!2.70e-12!49;UBERON:0003080!2.93e-12!40;UBERON:0002780!1.01e-11!39;UBERON:0001890!1.01e-11!39;UBERON:0006240!1.01e-11!39;UBERON:0000956!5.84e-08!21;UBERON:0001869!5.84e-08!21;UBERON:0000203!5.84e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.68e-25,54;UBERON:0001017,7.92e-23,73;UBERON:0001049,1.88e-22,52;UBERON:0005068,1.88e-22,52;UBERON:0006241,1.88e-22,52;UBERON:0007135,1.88e-22,52;UBERON:0001016,8.98e-22,75;UBERON:0002020,1.37e-20,34;UBERON:0002346,1.61e-18,64;UBERON:0003075,1.61e-18,64;UBERON:0007284,1.61e-18,64;UBERON:0002616,4.72e-17,46;UBERON:0000955,1.90e-16,47;UBERON:0006238,1.90e-16,47;UBERON:0004121,4.60e-16,95;UBERON:0000924,4.60e-16,95;UBERON:0006601,4.60e-16,95;UBERON:0003528,1.61e-15,29;UBERON:0002791,1.61e-15,29;UBERON:0001893,1.61e-15,29;UBERON:0003080,7.93e-15,40;UBERON:0010371,1.62e-14,73;UBERON:0010314,1.65e-14,92;UBERON:0002780,5.24e-14,39;UBERON:0001890,5.24e-14,39;UBERON:0006240,5.24e-14,39;UBERON:0003056,6.42e-13,49;UBERON:0000956,1.16e-09,21;UBERON:0001869,1.16e-09,21;UBERON:0000203,1.16e-09,21;UBERON:0003076,1.40e-08,12;UBERON:0003057,1.40e-08,12;UBERON:0000025,2.31e-08,114;UBERON:0002420,1.95e-07,8;UBERON:0007245,1.95e-07,8;UBERON:0010009,1.95e-07,8;UBERON:0010011,1.95e-07,8;UBERON:0000454,1.95e-07,8;UBERON:0004111,2.34e-07,122;UBERON:0002619,3.72e-07,17;UBERON:0002240,3.85e-07,6;UBERON:0005174,3.85e-07,6;UBERON:0001137,3.85e-07,6;UBERON:0001948,9.88e-07,5;UBERON:0002315,9.88e-07,5|phase1_expression=0.640595388419176,0.697950815278722,0,0,0,0.33575854382378,0.700837921786577,0.129123323441576,0,0,0,0,0.513602189793617,0.262261207256992,0,0,0,0.473193248037357,0,0,3.23164502574065,0.297872853602656,0.783599367416806,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0.418531630736908,2.3440060335714,1.57057123192139,0.588231488031014,0,1.45653105909346,0.629484089877886,1.21652317463417,0.917733760808408,1.56478268869608,1.09012578190223,2.41654801007919,0.777719596297134,1.1198913730029,0,0.335565212115473,0.725362142011344,1.00828139742739,0.514518872071894,2.0057340795713,0,2.02316460859598,5.28990979272033,3.1691570175309,1.69422266034566,2.66788438833342,1.3498495759221,1.97773272513395,2.1314403448383,0.299600110518405,3.84218305321555,1.76272340924412,1.62007125998029,1.26194976810829,6.85562362569129,6.62605622854841,2.20483438586917,2.1086003624012,1.83843757322004,2.20231761998777,3.70293280447044,4.14737639791857,5.53922408466814,4.02545631850602,5.2091337055676,4.4669279840221,5.06486349028512,2.59757021220577,2.65165726926301,4.12877874317399,2.79599168737951,0.605809546665472,0.604572480854284,0,0,0,0,0,0,0.280888840263504,1.70430322578058,2.07828803682295,1.7666978725517,0.14084341977668,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,1.02765491747154,0.517875767294343,0.29688427812965,0.520455980298408,0.913396434936424,0.461230994512117,0.301445281105245,0.23517741427141,0.376999773989026,0.988779870937496,0.433798070759735,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0.878342391034642,1.04723353406728,0.510914110417183,0.599075622529601,0.599902730993408,0.762421362438388,2.54644086988199,0.915001205637253,2.76439574648302,2.43354048269187,0.511430914660661,2.0778804455956,1.78465389374533,0.203678727700633,0.497627882440372,0,0.420883711772948,0.780722657776222,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| ||
|EntrezGene=19240 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt= | |||
|association_with_transcript=-24bp_to_ENSMUST00000144337_5end | |||
|description=CAGE_peak_5_at_Tmsb10_5end | |||
|id=chr6:72908417..72908423,- | |||
|ontology_enrichment_celltype=CL:0000117!2.22e-14!23;CL:0000337!2.22e-14!23;CL:0002319!5.02e-12!43;CL:0000540!7.79e-12!33;CL:0000047!7.79e-12!33;CL:0000031!7.79e-12!33;CL:0000404!7.79e-12!33;CL:0000393!2.40e-11!39;CL:0000211!2.40e-11!39;CL:0000221!2.62e-11!44;CL:0000133!2.62e-11!44;CL:0000055!5.67e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.58e-23,23;CL:0000337,5.58e-23,23;CL:0000540,8.42e-15,33;CL:0000047,8.42e-15,33;CL:0000031,8.42e-15,33;CL:0000404,8.42e-15,33;CL:0002319,9.39e-15,43;CL:0000221,3.46e-14,44;CL:0000133,3.46e-14,44;CL:0000393,1.98e-13,39;CL:0000211,1.98e-13,39;CL:0000034,6.65e-10,97;CL:0000723,3.50e-09,91;CL:0000048,3.50e-09,91;CL:0002321,9.91e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.69e-20!73;UBERON:0005743!8.69e-20!73;UBERON:0000073!1.41e-19!75;UBERON:0001016!1.41e-19!75;UBERON:0001049!1.07e-17!52;UBERON:0005068!1.07e-17!52;UBERON:0006241!1.07e-17!52;UBERON:0007135!1.07e-17!52;UBERON:0000955!3.92e-16!50;UBERON:0006238!3.92e-16!50;UBERON:0002616!6.09e-16!49;UBERON:0002020!1.69e-15!34;UBERON:0002346!8.67e-15!71;UBERON:0003075!8.67e-15!71;UBERON:0007284!8.67e-15!71;UBERON:0000033!5.49e-14!63;UBERON:0004121!1.93e-13!102;UBERON:0000924!1.93e-13!102;UBERON:0006601!1.93e-13!102;UBERON:0002791!2.65e-12!29;UBERON:0003528!2.65e-12!29;UBERON:0001893!2.65e-12!29;UBERON:0003056!2.70e-12!49;UBERON:0003080!2.93e-12!40;UBERON:0002780!1.01e-11!39;UBERON:0001890!1.01e-11!39;UBERON:0006240!1.01e-11!39;UBERON:0000956!5.84e-08!21;UBERON:0001869!5.84e-08!21;UBERON:0000203!5.84e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.68e-25,54;UBERON:0001017,7.92e-23,73;UBERON:0001049,1.88e-22,52;UBERON:0005068,1.88e-22,52;UBERON:0006241,1.88e-22,52;UBERON:0007135,1.88e-22,52;UBERON:0001016,8.98e-22,75;UBERON:0002020,1.37e-20,34;UBERON:0002346,1.61e-18,64;UBERON:0003075,1.61e-18,64;UBERON:0007284,1.61e-18,64;UBERON:0002616,4.72e-17,46;UBERON:0000955,1.90e-16,47;UBERON:0006238,1.90e-16,47;UBERON:0004121,4.60e-16,95;UBERON:0000924,4.60e-16,95;UBERON:0006601,4.60e-16,95;UBERON:0003528,1.61e-15,29;UBERON:0002791,1.61e-15,29;UBERON:0001893,1.61e-15,29;UBERON:0003080,7.93e-15,40;UBERON:0010371,1.62e-14,73;UBERON:0010314,1.65e-14,92;UBERON:0002780,5.24e-14,39;UBERON:0001890,5.24e-14,39;UBERON:0006240,5.24e-14,39;UBERON:0003056,6.42e-13,49;UBERON:0000956,1.16e-09,21;UBERON:0001869,1.16e-09,21;UBERON:0000203,1.16e-09,21;UBERON:0003076,1.40e-08,12;UBERON:0003057,1.40e-08,12;UBERON:0000025,2.31e-08,114;UBERON:0002420,1.95e-07,8;UBERON:0007245,1.95e-07,8;UBERON:0010009,1.95e-07,8;UBERON:0010011,1.95e-07,8;UBERON:0000454,1.95e-07,8;UBERON:0004111,2.34e-07,122;UBERON:0002619,3.72e-07,17;UBERON:0002240,3.85e-07,6;UBERON:0005174,3.85e-07,6;UBERON:0001137,3.85e-07,6;UBERON:0001948,9.88e-07,5;UBERON:0002315,9.88e-07,5 | |||
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| |||
|short_description=p5@Tmsb10 | |||
}} |
Revision as of 10:37, 14 September 2013
Short description: | p5@Tmsb10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tmsb10_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -24bp_to_ENSMUST00000144337_5end |
EntrezGene: | Tmsb10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.58e-23 | 23 |
neuroblast (sensu Vertebrata) | 5.58e-23 | 23 |
neuron | 8.42e-15 | 33 |
neuronal stem cell | 8.42e-15 | 33 |
neuroblast | 8.42e-15 | 33 |
electrically signaling cell | 8.42e-15 | 33 |
neural cell | 9.39e-15 | 43 |
ectodermal cell | 3.46e-14 | 44 |
neurectodermal cell | 3.46e-14 | 44 |
electrically responsive cell | 1.98e-13 | 39 |
electrically active cell | 1.98e-13 | 39 |
stem cell | 6.65e-10 | 97 |
somatic stem cell | 3.50e-09 | 91 |
multi fate stem cell | 3.50e-09 | 91 |
embryonic cell | 9.91e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.