FFCP PHASE1:Mm9::chr7:135831964..135831986,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=101490|HGNC=|MCL_coexpression_id=87|UniProt=Q8CDA1|association_with_transcript=-16bp_to_ENSMUST00000118605,uc009jzg.1_5end|description=CAGE_peak_1_at_Inpp5f_5end|id=chr7:135831964..135831986,+|ontology_enrichment_celltype=CL:0000117!5.69e-17!23;CL:0000337!5.69e-17!23;CL:0000540!1.10e-16!33;CL:0000047!1.10e-16!33;CL:0000031!1.10e-16!33;CL:0000404!1.10e-16!33;CL:0000221!4.89e-14!44;CL:0000133!4.89e-14!44;CL:0002319!6.48e-14!43;CL:0000393!9.32e-12!39;CL:0000211!9.32e-12!39;CL:0000055!1.15e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.76e-22,23;CL:0000337,5.76e-22,23;CL:0000540,6.32e-21,33;CL:0000047,6.32e-21,33;CL:0000031,6.32e-21,33;CL:0000404,6.32e-21,33;CL:0000393,8.93e-16,39;CL:0000211,8.93e-16,39;CL:0000221,1.04e-15,44;CL:0000133,1.04e-15,44;CL:0002319,1.55e-15,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.96e-29!75;UBERON:0001016!1.96e-29!75;UBERON:0001017!2.88e-29!73;UBERON:0005743!2.88e-29!73;UBERON:0002346!3.35e-28!71;UBERON:0003075!3.35e-28!71;UBERON:0007284!3.35e-28!71;UBERON:0004121!5.09e-26!102;UBERON:0000924!5.09e-26!102;UBERON:0006601!5.09e-26!102;UBERON:0001049!2.12e-24!52;UBERON:0005068!2.12e-24!52;UBERON:0006241!2.12e-24!52;UBERON:0007135!2.12e-24!52;UBERON:0000033!8.31e-23!63;UBERON:0000955!2.37e-22!50;UBERON:0006238!2.37e-22!50;UBERON:0002616!6.46e-22!49;UBERON:0003056!1.21e-20!49;UBERON:0002020!7.73e-20!34;UBERON:0003080!8.73e-19!40;UBERON:0002780!3.23e-18!39;UBERON:0001890!3.23e-18!39;UBERON:0006240!3.23e-18!39;UBERON:0002791!5.73e-16!29;UBERON:0003528!5.73e-16!29;UBERON:0001893!5.73e-16!29;UBERON:0007811!7.81e-15!86;UBERON:0000153!2.08e-11!94;UBERON:0000956!8.72e-11!21;UBERON:0001869!8.72e-11!21;UBERON:0000203!8.72e-11!21;UBERON:0002619!1.46e-08!17;UBERON:0002021!7.80e-07!10;UBERON:0000411!7.80e-07!10;UBERON:0001950!7.80e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.32e-35,73;UBERON:0001016,9.77e-35,75;UBERON:0002346,1.22e-33,64;UBERON:0003075,1.22e-33,64;UBERON:0007284,1.22e-33,64;UBERON:0000073,1.14e-32,54;UBERON:0004121,1.12e-30,95;UBERON:0000924,1.12e-30,95;UBERON:0006601,1.12e-30,95;UBERON:0001049,1.18e-30,52;UBERON:0005068,1.18e-30,52;UBERON:0006241,1.18e-30,52;UBERON:0007135,1.18e-30,52;UBERON:0010371,1.26e-27,73;UBERON:0000955,1.98e-25,47;UBERON:0006238,1.98e-25,47;UBERON:0002020,3.96e-25,34;UBERON:0002616,7.25e-25,46;UBERON:0003056,1.89e-24,49;UBERON:0003080,7.15e-23,40;UBERON:0002780,3.96e-22,39;UBERON:0001890,3.96e-22,39;UBERON:0006240,3.96e-22,39;UBERON:0010314,3.42e-21,92;UBERON:0003528,5.03e-20,29;UBERON:0002791,5.03e-20,29;UBERON:0001893,5.03e-20,29;UBERON:0000956,3.34e-13,21;UBERON:0001869,3.34e-13,21;UBERON:0000203,3.34e-13,21;UBERON:0002619,2.77e-10,17;UBERON:0002021,1.50e-08,10;UBERON:0000411,1.50e-08,10;UBERON:0001950,1.50e-08,10;UBERON:0002420,3.81e-08,8;UBERON:0007245,3.81e-08,8;UBERON:0010009,3.81e-08,8;UBERON:0010011,3.81e-08,8;UBERON:0000454,3.81e-08,8;UBERON:0003076,4.16e-08,12;UBERON:0003057,4.16e-08,12;UBERON:0002240,7.57e-07,6;UBERON:0005174,7.57e-07,6;UBERON:0001137,7.57e-07,6|phase1_expression=0.960893082628764,0,0,0,0,0,0.700837921786577,0.645616617207881,0.281577444303333,0,0.171217968225505,0.239316476986009,0,0.0874204024189974,0.333109761815663,0.202475267389826,1.39912375625629,0,0,0.42438965179803,1.7008658030214,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.09012578190223,0.659058548203415,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,84.5682806393119,123.254898170384,91.905553508396,0,0,0,0,0,0,0.768436610643109,34.73602012334,46.0370249711065,39.7514176954112,104.548260291792,108.888190689145,52.7935344616452,36.900506342021,66.1837526359215,16.5173821499083,19.1531007127782,21.6585211891303,100.365464962678,102.923599052711,106.266327593579,17.588528937087,21.9477417912355,15.5854212732346,153.796121617255,143.795397607094,109.602874145277,0.605809546665472,1.13357340160178,0,0,0,0.539703191637817,0,0,0,0,0,0,1.40843419776681,0,0,0,0,0,0,0.5709193985953,0,0.445326417194474,2.08182392119363,2.43572382649713,1.84492397804847,2.71300752994721,3.05730638552832,0.376999773989026,0,0,0,0,0.220841518460394,0,0,10.8328894894272,10.6817820474862,0,0.239630249011841,0,0,13.6309481858389,14.640019290196,57.1727302113533,7.99591872884472,13.5529192385075,13.9217989854905,17.5220564113178,0.101839363850316,0,0,0.841767423545896,1.04096354370163,3.90833577536904,3.06105620669094,4.37043971723574,3.60593445502038,6.91814089538189,5.05989312622536,3.10444044886819,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,8.62188789112922,51.2464969648836,0,0,1.70630600428187,0.464473343720877,0.902072229254653,0.403367049246685,0.444756087689741,0.380451252225118,0,0.988193728344065,0.754005626400808,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.685491075658373,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0.167506257441816,0,0,0,0.44292937929755,0,0,0,0,0,0,0,0,10.5963389391943,13.9481907044722,0,0,3.47059041357882,4.29482618726302,5.17016154558717,2.86762557543062,1.78238939265915,1.69845918473299,0,2.63030272120181,3.95287777946523,9.3183181762324,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,0,0,6.12791290356818,2.88097750450096,0.646793418913773,1.28602221018955,3.19212420556092,4.28085162244969,2.79733335023606,2.43571959291679,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,9.82754100655701,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0.279902904647316,0.138199973804424,0,0.316335993581135,1.82987520414164,0.540026704109006,0.418176592028937,0.655087691238533,0.404593039154462,0.41326727862668,0.26175594198403,0.129614973291793,0,0.56369293868419,0.448549638131936,0.330916980914195,0.388902376688095,0,0.506868376472335,0.352071715937262,0.39061315453185,0.734015410979976,0.483168241652012,0,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0.443068581523732,0.605798699688886,0.228620419965,0.403304740547362,0,0.481059208201647,0.350630706544707,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,28.8023439734704,26.2385384809091,22.9158205375759,25.7779773515531,17.8121455140367,10.5755145634558,13.5004500046361,10.8077088773813,15.8599843144472,9.83744592328458,2.38710899443606,5.58634822761443,6.82934423016537,7.29320151204882,3.35381060204772,9.74370594785075,10.8900896622791,8.85950746127245,9.62757628775446,7.58091635291392,6.33698249725599,8.67681170375951,7.95952813494,7.93911889820379,10.2235134740992,10.9547548995107,6.83717523074647,10.0312794641127,10.3021475200827,10.009526569139,6.17164654293748,8.5188386956482,8.34526664815623,9.88355633099834,12.3283288344083,11.253742849593,10.426894453748,10.5227884575137,10.0495044245938,8.97827634652382,9.49080144993393,9.06241237855184,9.00308294973317,9.60608415352989,7.52335782826451,13.739581786587,3.97683734357194,7.30561583764214,4.97349663378993,3.08827986767322,2.55054619182464|short_description=p1@Inpp5f}} | ||
|EntrezGene=101490 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|UniProt=Q8CDA1 | |||
|association_with_transcript=-16bp_to_ENSMUST00000118605,uc009jzg.1_5end | |||
|description=CAGE_peak_1_at_Inpp5f_5end | |||
|id=chr7:135831964..135831986,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.69e-17!23;CL:0000337!5.69e-17!23;CL:0000540!1.10e-16!33;CL:0000047!1.10e-16!33;CL:0000031!1.10e-16!33;CL:0000404!1.10e-16!33;CL:0000221!4.89e-14!44;CL:0000133!4.89e-14!44;CL:0002319!6.48e-14!43;CL:0000393!9.32e-12!39;CL:0000211!9.32e-12!39;CL:0000055!1.15e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.76e-22,23;CL:0000337,5.76e-22,23;CL:0000540,6.32e-21,33;CL:0000047,6.32e-21,33;CL:0000031,6.32e-21,33;CL:0000404,6.32e-21,33;CL:0000393,8.93e-16,39;CL:0000211,8.93e-16,39;CL:0000221,1.04e-15,44;CL:0000133,1.04e-15,44;CL:0002319,1.55e-15,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.96e-29!75;UBERON:0001016!1.96e-29!75;UBERON:0001017!2.88e-29!73;UBERON:0005743!2.88e-29!73;UBERON:0002346!3.35e-28!71;UBERON:0003075!3.35e-28!71;UBERON:0007284!3.35e-28!71;UBERON:0004121!5.09e-26!102;UBERON:0000924!5.09e-26!102;UBERON:0006601!5.09e-26!102;UBERON:0001049!2.12e-24!52;UBERON:0005068!2.12e-24!52;UBERON:0006241!2.12e-24!52;UBERON:0007135!2.12e-24!52;UBERON:0000033!8.31e-23!63;UBERON:0000955!2.37e-22!50;UBERON:0006238!2.37e-22!50;UBERON:0002616!6.46e-22!49;UBERON:0003056!1.21e-20!49;UBERON:0002020!7.73e-20!34;UBERON:0003080!8.73e-19!40;UBERON:0002780!3.23e-18!39;UBERON:0001890!3.23e-18!39;UBERON:0006240!3.23e-18!39;UBERON:0002791!5.73e-16!29;UBERON:0003528!5.73e-16!29;UBERON:0001893!5.73e-16!29;UBERON:0007811!7.81e-15!86;UBERON:0000153!2.08e-11!94;UBERON:0000956!8.72e-11!21;UBERON:0001869!8.72e-11!21;UBERON:0000203!8.72e-11!21;UBERON:0002619!1.46e-08!17;UBERON:0002021!7.80e-07!10;UBERON:0000411!7.80e-07!10;UBERON:0001950!7.80e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.32e-35,73;UBERON:0001016,9.77e-35,75;UBERON:0002346,1.22e-33,64;UBERON:0003075,1.22e-33,64;UBERON:0007284,1.22e-33,64;UBERON:0000073,1.14e-32,54;UBERON:0004121,1.12e-30,95;UBERON:0000924,1.12e-30,95;UBERON:0006601,1.12e-30,95;UBERON:0001049,1.18e-30,52;UBERON:0005068,1.18e-30,52;UBERON:0006241,1.18e-30,52;UBERON:0007135,1.18e-30,52;UBERON:0010371,1.26e-27,73;UBERON:0000955,1.98e-25,47;UBERON:0006238,1.98e-25,47;UBERON:0002020,3.96e-25,34;UBERON:0002616,7.25e-25,46;UBERON:0003056,1.89e-24,49;UBERON:0003080,7.15e-23,40;UBERON:0002780,3.96e-22,39;UBERON:0001890,3.96e-22,39;UBERON:0006240,3.96e-22,39;UBERON:0010314,3.42e-21,92;UBERON:0003528,5.03e-20,29;UBERON:0002791,5.03e-20,29;UBERON:0001893,5.03e-20,29;UBERON:0000956,3.34e-13,21;UBERON:0001869,3.34e-13,21;UBERON:0000203,3.34e-13,21;UBERON:0002619,2.77e-10,17;UBERON:0002021,1.50e-08,10;UBERON:0000411,1.50e-08,10;UBERON:0001950,1.50e-08,10;UBERON:0002420,3.81e-08,8;UBERON:0007245,3.81e-08,8;UBERON:0010009,3.81e-08,8;UBERON:0010011,3.81e-08,8;UBERON:0000454,3.81e-08,8;UBERON:0003076,4.16e-08,12;UBERON:0003057,4.16e-08,12;UBERON:0002240,7.57e-07,6;UBERON:0005174,7.57e-07,6;UBERON:0001137,7.57e-07,6 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0.700837921786577,0.645616617207881,0.281577444303333,0,0.171217968225505,0.239316476986009,0,0.0874204024189974,0.333109761815663,0.202475267389826,1.39912375625629,0,0,0.42438965179803,1.7008658030214,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.09012578190223,0.659058548203415,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,84.5682806393119,123.254898170384,91.905553508396,0,0,0,0,0,0,0.768436610643109,34.73602012334,46.0370249711065,39.7514176954112,104.548260291792,108.888190689145,52.7935344616452,36.900506342021,66.1837526359215,16.5173821499083,19.1531007127782,21.6585211891303,100.365464962678,102.923599052711,106.266327593579,17.588528937087,21.9477417912355,15.5854212732346,153.796121617255,143.795397607094,109.602874145277,0.605809546665472,1.13357340160178,0,0,0,0.539703191637817,0,0,0,0,0,0,1.40843419776681,0,0,0,0,0,0,0.5709193985953,0,0.445326417194474,2.08182392119363,2.43572382649713,1.84492397804847,2.71300752994721,3.05730638552832,0.376999773989026,0,0,0,0,0.220841518460394,0,0,10.8328894894272,10.6817820474862,0,0.239630249011841,0,0,13.6309481858389,14.640019290196,57.1727302113533,7.99591872884472,13.5529192385075,13.9217989854905,17.5220564113178,0.101839363850316,0,0,0.841767423545896,1.04096354370163,3.90833577536904,3.06105620669094,4.37043971723574,3.60593445502038,6.91814089538189,5.05989312622536,3.10444044886819,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,8.62188789112922,51.2464969648836,0,0,1.70630600428187,0.464473343720877,0.902072229254653,0.403367049246685,0.444756087689741,0.380451252225118,0,0.988193728344065,0.754005626400808,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.685491075658373,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0.167506257441816,0,0,0,0.44292937929755,0,0,0,0,0,0,0,0,10.5963389391943,13.9481907044722,0,0,3.47059041357882,4.29482618726302,5.17016154558717,2.86762557543062,1.78238939265915,1.69845918473299,0,2.63030272120181,3.95287777946523,9.3183181762324,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.565815239267694,0.295301892880773,0,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,0,0,6.12791290356818,2.88097750450096,0.646793418913773,1.28602221018955,3.19212420556092,4.28085162244969,2.79733335023606,2.43571959291679,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,9.82754100655701,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0.279902904647316,0.138199973804424,0,0.316335993581135,1.82987520414164,0.540026704109006,0.418176592028937,0.655087691238533,0.404593039154462,0.41326727862668,0.26175594198403,0.129614973291793,0,0.56369293868419,0.448549638131936,0.330916980914195,0.388902376688095,0,0.506868376472335,0.352071715937262,0.39061315453185,0.734015410979976,0.483168241652012,0,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0.443068581523732,0.605798699688886,0.228620419965,0.403304740547362,0,0.481059208201647,0.350630706544707,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,28.8023439734704,26.2385384809091,22.9158205375759,25.7779773515531,17.8121455140367,10.5755145634558,13.5004500046361,10.8077088773813,15.8599843144472,9.83744592328458,2.38710899443606,5.58634822761443,6.82934423016537,7.29320151204882,3.35381060204772,9.74370594785075,10.8900896622791,8.85950746127245,9.62757628775446,7.58091635291392,6.33698249725599,8.67681170375951,7.95952813494,7.93911889820379,10.2235134740992,10.9547548995107,6.83717523074647,10.0312794641127,10.3021475200827,10.009526569139,6.17164654293748,8.5188386956482,8.34526664815623,9.88355633099834,12.3283288344083,11.253742849593,10.426894453748,10.5227884575137,10.0495044245938,8.97827634652382,9.49080144993393,9.06241237855184,9.00308294973317,9.60608415352989,7.52335782826451,13.739581786587,3.97683734357194,7.30561583764214,4.97349663378993,3.08827986767322,2.55054619182464 | |||
|short_description=p1@Inpp5f | |||
}} |
Revision as of 12:00, 14 September 2013
Short description: | p1@Inpp5f |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Inpp5f_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -16bp_to_ENSMUST00000118605, uc009jzg.1_5end |
EntrezGene: | Inpp5f |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.76e-22 | 23 |
neuroblast (sensu Vertebrata) | 5.76e-22 | 23 |
neuron | 6.32e-21 | 33 |
neuronal stem cell | 6.32e-21 | 33 |
neuroblast | 6.32e-21 | 33 |
electrically signaling cell | 6.32e-21 | 33 |
electrically responsive cell | 8.93e-16 | 39 |
electrically active cell | 8.93e-16 | 39 |
ectodermal cell | 1.04e-15 | 44 |
neurectodermal cell | 1.04e-15 | 44 |
neural cell | 1.55e-15 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.