FFCP PHASE1:Hg19::chr2:217237176..217237246,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57574 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29269 | |||
|TSSclassifier=weak | |||
|UniProt=Q9P2E8 | |||
|association_with_transcript=-426bp_to_ENST00000273067,NM_020814,uc002vgb.2_5end | |||
|description=CAGE_peak_2_at_MARCH4_5end | |||
|id=chr2:217237176..217237246,- | |||
|ontology_enrichment_celltype=CL:0000055!1.69e-23!180;CL:0000057!1.35e-19!75;CL:0000222!2.46e-15!119;CL:0000220!2.45e-11!246;CL:0002321!3.02e-11!248;CL:0000213!2.83e-10!57;CL:0000215!2.83e-10!57;CL:0002620!9.05e-10!23;CL:0000192!8.89e-07!42;CL:0000514!8.89e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.16e-11;23!CL:0000057;2.10e-09;73!CL:0000077;3.34e-07;19!CL:0000213;7.09e-07;58!CL:0000215;7.09e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.70e-21,76;CL:0000222,2.40e-12,121;CL:0000213,3.12e-12,58;CL:0000215,3.12e-12,58;CL:0002620,4.55e-11,23;CL:0000077,3.48e-07,19;CL:0000076,4.68e-07,63;CL:0002078,4.72e-07,45;CL:0000115,5.99e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.51e-21!312;UBERON:0000483!6.29e-21!309;UBERON:0000475!9.68e-20!365;UBERON:0000073!2.53e-17!94;UBERON:0001016!2.53e-17!94;UBERON:0000025!3.75e-17!194;UBERON:0005743!8.48e-17!86;UBERON:0004121!1.98e-16!169;UBERON:0001017!4.66e-16!82;UBERON:0000924!2.74e-15!173;UBERON:0006601!2.74e-15!173;UBERON:0004111!3.58e-15!241;UBERON:0002780!2.76e-14!41;UBERON:0001890!2.76e-14!41;UBERON:0006240!2.76e-14!41;UBERON:0000477!3.36e-14!286;UBERON:0001049!6.28e-14!57;UBERON:0005068!6.28e-14!57;UBERON:0006241!6.28e-14!57;UBERON:0007135!6.28e-14!57;UBERON:0003080!1.66e-13!42;UBERON:0000955!2.12e-13!69;UBERON:0006238!2.12e-13!69;UBERON:0003075!2.16e-13!86;UBERON:0007284!2.16e-13!86;UBERON:0003056!5.51e-13!61;UBERON:0002616!6.18e-13!59;UBERON:0001869!7.47e-13!32;UBERON:0000033!1.56e-12!123;UBERON:0002346!6.56e-12!90;UBERON:0001893!7.79e-12!34;UBERON:0002049!9.93e-12!79;UBERON:0007798!9.93e-12!79;UBERON:0002619!1.25e-11!22;UBERON:0001637!1.26e-11!42;UBERON:0003509!1.26e-11!42;UBERON:0004572!1.26e-11!42;UBERON:0002020!1.34e-11!34;UBERON:0003528!1.34e-11!34;UBERON:0000956!1.77e-11!25;UBERON:0000203!1.77e-11!25;UBERON:0002791!2.14e-11!33;UBERON:0000055!3.03e-11!69;UBERON:0001950!6.67e-11!20;UBERON:0000064!8.15e-11!219;UBERON:0000153!1.05e-10!129;UBERON:0007811!1.05e-10!129;UBERON:0001981!1.90e-10!60;UBERON:0007500!1.90e-10!60;UBERON:0004537!1.90e-10!60;UBERON:0006965!1.90e-10!60;UBERON:0000467!1.88e-09!625;UBERON:0004872!2.43e-09!84;UBERON:0000480!2.80e-09!626;UBERON:0000481!3.44e-09!347;UBERON:0000468!7.66e-09!659;UBERON:0004573!2.09e-08!33;UBERON:0004571!2.09e-08!33;UBERON:0002097!5.65e-08!40;UBERON:0003914!6.97e-08!118;UBERON:0000914!1.11e-07!83;UBERON:0002329!1.11e-07!83;UBERON:0003077!1.11e-07!83;UBERON:0003059!1.11e-07!83;UBERON:0007282!1.11e-07!83;UBERON:0009618!1.11e-07!83;UBERON:0007285!1.11e-07!83;UBERON:0000947!3.20e-07!21;UBERON:0010191!3.20e-07!21;UBERON:0000486!3.26e-07!82;UBERON:0002199!5.48e-07!45;UBERON:0002416!5.48e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.14e-12;22!UBERON:0000956;1.13e-11;25!UBERON:0000203;1.13e-11;25!UBERON:0001869;1.27e-11;32!UBERON:0001950;1.58e-11;20!UBERON:0002791;6.01e-11;32!UBERON:0002780;1.81e-10;41!UBERON:0001890;1.81e-10;41!UBERON:0003528;1.90e-10;34!UBERON:0002020;1.90e-10;34!UBERON:0001893;3.83e-10;34!UBERON:0001637;2.34e-09;42!UBERON:0003509;2.34e-09;42!UBERON:0004572;2.34e-09;42!UBERON:0000073;1.79e-07;53!UBERON:0002616;1.79e-07;53!UBERON:0004573;2.13e-07;33!UBERON:0004571;2.13e-07;33!UBERON:0000947;3.09e-07;21!UBERON:0010191;3.09e-07;21!UBERON:0002097;3.39e-07;41!UBERON:0007500;3.59e-07;56!UBERON:0001981;3.59e-07;56!UBERON:0004537;3.59e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,6.16e-17,192;UBERON:0000119,6.14e-16,309;UBERON:0000483,2.76e-15,306;UBERON:0002780,2.38e-14,41;UBERON:0001890,2.38e-14,41;UBERON:0003080,2.38e-14,41;UBERON:0006240,2.38e-14,41;UBERON:0004111,4.60e-14,240;UBERON:0001016,4.85e-14,89;UBERON:0001049,7.81e-14,56;UBERON:0005068,7.81e-14,56;UBERON:0006241,7.81e-14,56;UBERON:0007135,7.81e-14,56;UBERON:0010314,2.64e-13,132;UBERON:0000073,3.97e-13,53;UBERON:0002616,3.97e-13,53;UBERON:0001017,5.14e-13,81;UBERON:0001869,5.55e-13,32;UBERON:0002619,1.57e-12,22;UBERON:0004121,3.16e-12,171;UBERON:0000924,3.16e-12,171;UBERON:0006601,3.16e-12,171;UBERON:0001637,4.94e-12,42;UBERON:0003509,4.94e-12,42;UBERON:0004572,4.94e-12,42;UBERON:0003528,8.09e-12,34;UBERON:0002020,8.09e-12,34;UBERON:0002791,9.52e-12,32;UBERON:0000956,9.93e-12,25;UBERON:0000203,9.93e-12,25;UBERON:0000955,1.04e-11,68;UBERON:0006238,1.04e-11,68;UBERON:0001950,1.11e-11,20;UBERON:0001893,1.46e-11,34;UBERON:0003056,3.74e-11,61;UBERON:0000055,4.43e-11,68;UBERON:0003075,7.21e-11,82;UBERON:0007284,7.21e-11,82;UBERON:0010371,7.64e-11,104;UBERON:0007500,9.28e-11,59;UBERON:0001981,9.28e-11,59;UBERON:0004537,9.28e-11,59;UBERON:0006965,9.28e-11,59;UBERON:0002049,1.14e-10,78;UBERON:0007798,1.14e-10,78;UBERON:0002346,1.54e-09,86;UBERON:0002097,2.90e-09,41;UBERON:0004872,8.58e-09,83;UBERON:0002199,1.97e-08,46;UBERON:0002416,1.97e-08,46;UBERON:0004573,2.14e-08,33;UBERON:0004571,2.14e-08,33;UBERON:0003914,3.24e-08,117;UBERON:0000947,1.17e-07,21;UBERON:0010191,1.17e-07,21 | |||
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| |||
|short_description=p2@MARCH4 | |||
}} |
Revision as of 08:30, 21 January 2014
Short description: | p2@MARCH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MARCH4_5end |
Coexpression cluster: | NA |
Association with transcript: | -426bp_to_ENST00000273067, NM_020814, uc002vgb.2_5end |
EntrezGene: | MARCH4 |
HGNC: | 29269 |
UniProt: | Q9P2E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.70e-21 | 76 |
mesodermal cell | 2.40e-12 | 121 |
lining cell | 3.12e-12 | 58 |
barrier cell | 3.12e-12 | 58 |
skin fibroblast | 4.55e-11 | 23 |
mesothelial cell | 3.48e-07 | 19 |
squamous epithelial cell | 4.68e-07 | 63 |
meso-epithelial cell | 4.72e-07 | 45 |
endothelial cell | 5.99e-07 | 36 |