FFCP PHASE1:Hg19::chr21:17566902..17566923,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=114bp_to_ENST00000445461_5end | |||
|coexpression_cluster_id=C4068 | |||
|description=CAGE_peak_8_at_LINC00478_5end | |||
|id=chr21:17566902..17566923,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.16e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.44e-33!115;UBERON:0001049!2.18e-33!57;UBERON:0005068!2.18e-33!57;UBERON:0006241!2.18e-33!57;UBERON:0007135!2.18e-33!57;UBERON:0002616!7.17e-30!59;UBERON:0001017!1.31e-29!82;UBERON:0005743!4.53e-29!86;UBERON:0000955!1.47e-28!69;UBERON:0006238!1.47e-28!69;UBERON:0003075!1.95e-27!86;UBERON:0007284!1.95e-27!86;UBERON:0000073!7.42e-26!94;UBERON:0001016!7.42e-26!94;UBERON:0002346!8.52e-26!90;UBERON:0002780!1.08e-25!41;UBERON:0001890!1.08e-25!41;UBERON:0006240!1.08e-25!41;UBERON:0003080!1.32e-24!42;UBERON:0001893!1.60e-20!34;UBERON:0000153!1.64e-20!129;UBERON:0007811!1.64e-20!129;UBERON:0002020!2.17e-20!34;UBERON:0003528!2.17e-20!34;UBERON:0002791!8.33e-20!33;UBERON:0003056!2.03e-19!61;UBERON:0000033!2.23e-19!123;UBERON:0001869!4.70e-19!32;UBERON:0004121!1.21e-15!169;UBERON:0000924!4.86e-15!173;UBERON:0006601!4.86e-15!173;UBERON:0000956!8.54e-14!25;UBERON:0000203!8.54e-14!25;UBERON:0002619!5.56e-12!22;UBERON:0001950!1.83e-10!20;UBERON:0003076!8.15e-10!15;UBERON:0003057!8.15e-10!15;UBERON:0000475!1.32e-09!365;UBERON:0000477!2.95e-09!286;UBERON:0002308!2.87e-08!9;UBERON:0000125!2.87e-08!9;UBERON:0000119!2.90e-08!312;UBERON:0004732!3.38e-08!13;UBERON:0000479!3.40e-08!787;UBERON:0000483!3.43e-08!309;UBERON:0000481!3.88e-08!347;UBERON:0004733!1.22e-07!12;UBERON:0002028!1.22e-07!12;UBERON:0007277!1.22e-07!12;UBERON:0000062!3.22e-07!511;UBERON:0000025!4.37e-07!194;UBERON:0009663!6.30e-07!7;UBERON:0000922!6.68e-07!612;UBERON:0000468!8.06e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;9.75e-34;53!UBERON:0002616;9.75e-34;53!UBERON:0002780;3.53e-31;41!UBERON:0001890;3.53e-31;41!UBERON:0003528;5.18e-28;34!UBERON:0002020;5.18e-28;34!UBERON:0002791;1.87e-27;32!UBERON:0001893;2.55e-27;34!UBERON:0001869;6.01e-27;32!UBERON:0001017;3.07e-22;75!UBERON:0000955;9.28e-22;68!UBERON:0000956;2.64e-19;25!UBERON:0000203;2.64e-19;25!UBERON:0001016;1.34e-18;83!UBERON:0004732;4.19e-16;13!UBERON:0000125;9.86e-16;9!UBERON:0002308;9.86e-16;9!UBERON:0002619;1.20e-15;22!UBERON:0004733;5.91e-15;12!UBERON:0002028;5.91e-15;12!UBERON:0009663;6.42e-13;7!UBERON:0001950;7.74e-13;20!UBERON:0002420;8.78e-13;9!UBERON:0007245;8.78e-13;9!UBERON:0010009;8.78e-13;9!UBERON:0010011;8.78e-13;9!UBERON:0000454;8.78e-13;9!UBERON:0007023;1.14e-12;114!UBERON:0001894;5.34e-12;7!UBERON:0000200;1.49e-10;6!UBERON:0002680;2.26e-10;9!UBERON:0001895;2.26e-10;9!UBERON:0002298;2.38e-10;6!UBERON:0000369;2.50e-08;4!UBERON:0002435;2.50e-08;4!UBERON:0000204;2.50e-08;4!UBERON:0002784;7.65e-08;4!UBERON:0003296;4.66e-07;4!UBERON:0010133;4.66e-07;4!UBERON:0005383;9.89e-07;3!UBERON:0005382;9.89e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.33e-62,56;UBERON:0005068,1.33e-62,56;UBERON:0006241,1.33e-62,56;UBERON:0007135,1.33e-62,56;UBERON:0000073,1.02e-57,53;UBERON:0002616,1.02e-57,53;UBERON:0001017,8.72e-54,81;UBERON:0000955,8.91e-50,68;UBERON:0006238,8.91e-50,68;UBERON:0001016,1.42e-48,89;UBERON:0007023,8.60e-48,114;UBERON:0003075,8.67e-44,82;UBERON:0007284,8.67e-44,82;UBERON:0002780,3.02e-43,41;UBERON:0001890,3.02e-43,41;UBERON:0003080,3.02e-43,41;UBERON:0006240,3.02e-43,41;UBERON:0002346,5.45e-41,86;UBERON:0010371,1.06e-35,104;UBERON:0001893,1.29e-32,34;UBERON:0003528,2.30e-32,34;UBERON:0002020,2.30e-32,34;UBERON:0001869,1.26e-29,32;UBERON:0002791,1.43e-29,32;UBERON:0003056,3.96e-29,61;UBERON:0010314,2.02e-28,132;UBERON:0004121,2.93e-24,171;UBERON:0000924,2.93e-24,171;UBERON:0006601,2.93e-24,171;UBERON:0003076,7.05e-20,15;UBERON:0003057,7.05e-20,15;UBERON:0000956,3.64e-19,25;UBERON:0000203,3.64e-19,25;UBERON:0011216,8.33e-19,223;UBERON:0004732,2.04e-16,13;UBERON:0000125,8.27e-16,9;UBERON:0002308,8.27e-16,9;UBERON:0000025,9.52e-16,192;UBERON:0002619,1.37e-15,22;UBERON:0004733,3.10e-15,12;UBERON:0002028,3.10e-15,12;UBERON:0007277,3.10e-15,12;UBERON:0009663,5.71e-13,7;UBERON:0002420,8.14e-13,9;UBERON:0007245,8.14e-13,9;UBERON:0010009,8.14e-13,9;UBERON:0010011,8.14e-13,9;UBERON:0000454,8.14e-13,9;UBERON:0001950,9.60e-13,20;UBERON:0004111,1.98e-12,240;UBERON:0001894,2.03e-12,7;UBERON:0006222,2.03e-12,7;UBERON:0000200,1.18e-10,6;UBERON:0002680,1.23e-10,9;UBERON:0001895,1.23e-10,9;UBERON:0010092,1.23e-10,9;UBERON:0002298,1.38e-10,6;UBERON:0000483,1.10e-08,306;UBERON:0000119,1.92e-08,309;UBERON:0000369,2.17e-08,4;UBERON:0002435,2.17e-08,4;UBERON:0000204,2.17e-08,4;UBERON:0010082,2.17e-08,4;UBERON:0002784,5.03e-08,4;UBERON:0003296,1.72e-07,4;UBERON:0010133,1.72e-07,4;UBERON:0005383,8.43e-07,3;UBERON:0005382,8.43e-07,3 | |||
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| |||
|short_description=p8@LINC00478 | |||
}} |
Revision as of 13:02, 21 January 2014
Short description: | p8@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LINC00478_5end |
Coexpression cluster: | C4068_myeloma_Astrocyte_pineal_hippocampus_caudate_cervix_thalamus |
Association with transcript: | 114bp_to_ENST00000445461_5end |
EntrezGene: | NA |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data