FFCP PHASE1:Hg19::chr21:27011880..27011886,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14686 | |||
|TSSclassifier=strong | |||
|UniProt=B4DGT9 | |||
|association_with_transcript=-23bp_to_ENST00000425221_5end | |||
|description=CAGE_peak_13_at_JAM2_5end | |||
|id=chr21:27011880..27011886,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.96e-24;2!CL:0002541;1.61e-16;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.55e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.61e-16;3!UBERON:0003057;1.61e-16;3!UBERON:0010227;1.82e-13;1!UBERON:0006222;5.06e-13;1!UBERON:0010122;2.28e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.77e-43!115;UBERON:0001017!4.90e-37!82;UBERON:0005743!6.25e-36!86;UBERON:0000073!3.40e-35!94;UBERON:0001016!3.40e-35!94;UBERON:0001049!2.07e-34!57;UBERON:0005068!2.07e-34!57;UBERON:0006241!2.07e-34!57;UBERON:0007135!2.07e-34!57;UBERON:0000955!4.44e-28!69;UBERON:0006238!4.44e-28!69;UBERON:0003075!6.23e-28!86;UBERON:0007284!6.23e-28!86;UBERON:0002346!3.52e-27!90;UBERON:0002616!4.03e-27!59;UBERON:0003080!1.01e-26!42;UBERON:0002780!1.62e-25!41;UBERON:0001890!1.62e-25!41;UBERON:0006240!1.62e-25!41;UBERON:0001893!6.08e-24!34;UBERON:0001869!1.12e-23!32;UBERON:0002020!1.18e-23!34;UBERON:0003528!1.18e-23!34;UBERON:0002791!6.12e-23!33;UBERON:0003056!2.85e-21!61;UBERON:0004121!8.05e-21!169;UBERON:0000924!1.14e-20!173;UBERON:0006601!1.14e-20!173;UBERON:0000033!1.45e-18!123;UBERON:0000956!5.61e-18!25;UBERON:0000203!5.61e-18!25;UBERON:0000153!6.61e-18!129;UBERON:0007811!6.61e-18!129;UBERON:0002619!2.44e-17!22;UBERON:0001950!2.49e-17!20;UBERON:0003076!9.07e-09!15;UBERON:0003057!9.07e-09!15;UBERON:0002021!3.49e-08!5;UBERON:0001871!1.12e-07!7;UBERON:0002298!1.84e-07!8;UBERON:0004111!3.17e-07!241;UBERON:0002420!3.21e-07!9;UBERON:0007245!3.21e-07!9;UBERON:0010009!3.21e-07!9;UBERON:0010011!3.21e-07!9;UBERON:0000454!3.21e-07!9;UBERON:0002308!4.08e-07!9;UBERON:0000125!4.08e-07!9;UBERON:0000025!6.33e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.61e-16;3!UBERON:0005174;1.61e-16;3!UBERON:0003124;1.61e-16;3!UBERON:0000920;1.61e-16;3!UBERON:0001137;1.61e-16;3!UBERON:0002079;1.82e-13;1!UBERON:0002021;2.71e-10;5!UBERON:0001950;3.84e-09;20!UBERON:0001016;7.26e-09;83!UBERON:0002791;7.66e-09;32!UBERON:0001869;9.13e-09;32!UBERON:0002619;2.30e-08;22!UBERON:0003528;3.39e-08;34!UBERON:0002020;3.39e-08;34!UBERON:0002780;3.52e-08;41!UBERON:0001890;3.52e-08;41!UBERON:0000956;2.02e-07;25!UBERON:0000203;2.02e-07;25!UBERON:0001873;2.28e-07;2!UBERON:0002081;2.28e-07;2!UBERON:0001893;2.64e-07;34!UBERON:0002360;3.81e-07;2!UBERON:0000094;3.81e-07;2!UBERON:0010743;3.81e-07;2!UBERON:0001017;4.44e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.55e-17,3;UBERON:0002240,1.17e-16,3;UBERON:0005174,1.17e-16,3;UBERON:0001137,1.17e-16,3;UBERON:0001017,1.46e-15,81;UBERON:0001016,6.70e-14,89;UBERON:0002079,2.06e-13,1;UBERON:0001049,2.55e-12,56;UBERON:0005068,2.55e-12,56;UBERON:0006241,2.55e-12,56;UBERON:0007135,2.55e-12,56;UBERON:0002021,2.98e-10,5;UBERON:0002780,1.04e-09,41;UBERON:0001890,1.04e-09,41;UBERON:0003080,1.04e-09,41;UBERON:0006240,1.04e-09,41;UBERON:0001950,4.56e-09,20;UBERON:0002791,8.67e-09,32;UBERON:0001869,8.67e-09,32;UBERON:0002619,2.69e-08,22;UBERON:0003528,2.79e-08,34;UBERON:0002020,2.79e-08,34;UBERON:0001893,2.79e-08,34;UBERON:0003075,3.46e-08,82;UBERON:0007284,3.46e-08,82;UBERON:0004121,5.00e-08,171;UBERON:0000924,5.00e-08,171;UBERON:0006601,5.00e-08,171;UBERON:0002346,9.04e-08,86;UBERON:0003124,1.02e-07,7;UBERON:0000073,1.83e-07,53;UBERON:0002616,1.83e-07,53;UBERON:0001873,2.15e-07,2;UBERON:0010122,2.15e-07,2;UBERON:0000956,2.32e-07,25;UBERON:0000203,2.32e-07,25;UBERON:0002081,2.43e-07,2;UBERON:0010227,2.43e-07,2;UBERON:0002360,4.69e-07,2;UBERON:0000094,4.69e-07,2;UBERON:0010743,4.69e-07,2 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0.251085279189606,0.152826811495903,0,0.157421562627358,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0,0,0,0.214840489736547,0.290033387828457,0.0852266274161009,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.47748896947538,0,0,0.994147647766298,0.140669416410513,0.111308705022906,0,0,0,0.276283915531148,0,0.102268682502155,0,0.622079175323615,0,0,0,0.295930216910801,0,0,0.969332746095218,0.74214478529481,0,0,0,0.724999575434793,0,0,0,0,0,0,2.65722415744152,0.361789315876224,0,0.221158519862449,0.295547618953547,1.09692698576986,0,0,0.846452843541768,0,0,0.0897576444097721,0,1.5950057986596,1.37396390102793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0.296521128680622,1.23563938946503,0.626531697032732,0.741412462787447,0,1.63985112007737,0,0,0,0,1.20990716048664,0,0.442306057399416,0.901940516486955,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.775912131907355,0.176512253383001,0.225980740780532,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0.262887354279314,0.279282401272254,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.408610218334727,0,0.550157746388935,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0.488105059607853,0.1251909307065,0.573409195690071,0.332787154610557,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0.431299245586727,0.157265941855896,0,0,0.212574920101683,0,0,0,0,0,0,0,0.385375350578757,1.41696576325585,0.638535436228605,0.615349092722265,1.00828678488687,0.414943514785307,0.484426936895553,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.317079050969534,1.09394961803644,0,0.496211178389294,0,0,0.535701835878287,0.336283722218824,0,0,0.0887023701626388,0.576169937778896,0,0.135939465953663,0.0657727735628491,0,0,0.235479278551542,0.628462359664008,0,0,0,0.47775168788705,0.214429632529969,0.790068058663633,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,1.37415926980462,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,2.34913964476542,0.535928260312357,0,0.20686599172379,0,0.476128862927481,0,0,0,0.318235791390825,0.202117188958219,0.435433495793923,0.342233301085281,0.0673520530145875,0.286888821570705,0,0,0.320182037633146,0,0,0,0,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p13@JAM2 | |||
}} |
Revision as of 13:09, 21 January 2014
Short description: | p13@JAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_JAM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000425221_5end |
EntrezGene: | JAM2 |
HGNC: | 14686 |
UniProt: | B4DGT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.55e-17 | 3 |