FFCP PHASE1:Hg19::chr21:34144448..34144480,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1290 | |||
|TSSclassifier=strong | |||
|UniProt=Q17RA5,F8WEE1,F8WB83 | |||
|association_with_transcript=0bp_to_ENST00000382378,ENST00000453404,ENST00000454365_5end | |||
|coexpression_cluster_id=C3484 | |||
|description=CAGE_peak_1_at_C21orf49_5end | |||
|id=chr21:34144448..34144480,+ | |||
|ontology_enrichment_celltype=CL:0000838!5.39e-13!52;CL:0000542!9.66e-13!53;CL:0000051!9.66e-13!53;CL:0000791!2.07e-11!18;CL:0000789!2.07e-11!18;CL:0002420!2.07e-11!18;CL:0002419!2.07e-11!18;CL:0000790!2.07e-11!18;CL:0000084!8.40e-09!25;CL:0000827!8.40e-09!25;CL:0000625!8.94e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.80e-13;18!CL:0000789;8.80e-13;18!CL:0002419;8.80e-13;18!CL:0000084;2.10e-09;25!CL:0000625;1.21e-08;11!CL:0000542;4.18e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.34e-13,52;CL:0000791,1.13e-12,18;CL:0000789,1.13e-12,18;CL:0002420,1.13e-12,18;CL:0002419,1.13e-12,18;CL:0000790,1.13e-12,18;CL:0000542,1.39e-12,53;CL:0000051,1.39e-12,53;CL:0000084,3.17e-09,25;CL:0000827,3.17e-09,25;CL:0000625,1.42e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;8.80e-13;18!CL:0000051;4.18e-08;53!UBERON:0006601;7.54e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.50e-38!115;UBERON:0001049!1.07e-23!57;UBERON:0005068!1.07e-23!57;UBERON:0006241!1.07e-23!57;UBERON:0007135!1.07e-23!57;UBERON:0002616!9.51e-20!59;UBERON:0002780!8.90e-19!41;UBERON:0001890!8.90e-19!41;UBERON:0006240!8.90e-19!41;UBERON:0003080!1.12e-18!42;UBERON:0002346!4.60e-18!90;UBERON:0000955!5.40e-18!69;UBERON:0006238!5.40e-18!69;UBERON:0003075!1.71e-17!86;UBERON:0007284!1.71e-17!86;UBERON:0005743!1.55e-16!86;UBERON:0001017!2.32e-16!82;UBERON:0000073!5.10e-15!94;UBERON:0001016!5.10e-15!94;UBERON:0002020!9.46e-15!34;UBERON:0003528!9.46e-15!34;UBERON:0001893!1.01e-14!34;UBERON:0003056!2.58e-14!61;UBERON:0002791!2.65e-14!33;UBERON:0001869!1.88e-13!32;UBERON:0000153!2.31e-12!129;UBERON:0007811!2.31e-12!129;UBERON:0000033!1.20e-10!123;UBERON:0002619!2.20e-10!22;UBERON:0000956!3.91e-10!25;UBERON:0000203!3.91e-10!25;UBERON:0001950!1.19e-09!20;UBERON:0000924!9.62e-08!173;UBERON:0006601!9.62e-08!173;UBERON:0004121!2.76e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.59e-15;41!UBERON:0001890;5.59e-15;41!UBERON:0000073;9.99e-15;53!UBERON:0002616;9.99e-15;53!UBERON:0001893;7.52e-14;34!UBERON:0003528;1.38e-13;34!UBERON:0002020;1.38e-13;34!UBERON:0002791;2.11e-13;32!UBERON:0001869;3.56e-13;32!UBERON:0002619;1.12e-11;22!UBERON:0007023;6.60e-11;114!UBERON:0001950;8.05e-11;20!UBERON:0000956;8.14e-11;25!UBERON:0000203;8.14e-11;25!UBERON:0000955;1.46e-08;68!UBERON:0001017;1.94e-08;75!UBERON:0001016;4.79e-08;83!UBERON:0000125;5.76e-07;9!UBERON:0002308;5.76e-07;9!UBERON:0002420;6.79e-07;9!UBERON:0007245;6.79e-07;9!UBERON:0010009;6.79e-07;9!UBERON:0010011;6.79e-07;9!UBERON:0000454;6.79e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.04e-41,114;UBERON:0001049,7.60e-26,56;UBERON:0005068,7.60e-26,56;UBERON:0006241,7.60e-26,56;UBERON:0007135,7.60e-26,56;UBERON:0000073,4.30e-24,53;UBERON:0002616,4.30e-24,53;UBERON:0002780,1.29e-20,41;UBERON:0001890,1.29e-20,41;UBERON:0003080,1.29e-20,41;UBERON:0006240,1.29e-20,41;UBERON:0002346,3.03e-20,86;UBERON:0003075,1.30e-19,82;UBERON:0007284,1.30e-19,82;UBERON:0000955,9.36e-18,68;UBERON:0006238,9.36e-18,68;UBERON:0001017,1.17e-16,81;UBERON:0003528,4.37e-16,34;UBERON:0002020,4.37e-16,34;UBERON:0001893,4.71e-16,34;UBERON:0001016,1.34e-15,89;UBERON:0003056,1.53e-15,61;UBERON:0002791,7.23e-15,32;UBERON:0001869,1.25e-14,32;UBERON:0010371,4.84e-12,104;UBERON:0002619,1.62e-11,22;UBERON:0000956,6.67e-11,25;UBERON:0000203,6.67e-11,25;UBERON:0001950,1.09e-10,20;UBERON:0010314,1.56e-08,132;UBERON:0004121,2.76e-08,171;UBERON:0000924,2.76e-08,171;UBERON:0006601,2.76e-08,171;UBERON:0000125,7.41e-07,9;UBERON:0002308,7.41e-07,9;UBERON:0002420,8.69e-07,9;UBERON:0007245,8.69e-07,9;UBERON:0010009,8.69e-07,9;UBERON:0010011,8.69e-07,9;UBERON:0000454,8.69e-07,9 | |||
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| |||
|short_description=p1@C21orf49 | |||
}} |
Revision as of 13:25, 21 January 2014
Short description: | p1@C21orf49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C21orf49_5end |
Coexpression cluster: | C3484_CD4_cerebellum_CD8_pineal_thalamus_substantia_optic |
Association with transcript: | 0bp_to_ENST00000382378, ENST00000453404, ENST00000454365_5end |
EntrezGene: | NA |
HGNC: | 1290 |
UniProt: | Q17RA5F8WEE1F8WB83 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.34e-13 | 52 |
mature alpha-beta T cell | 1.13e-12 | 18 |
alpha-beta T cell | 1.13e-12 | 18 |
immature T cell | 1.13e-12 | 18 |
mature T cell | 1.13e-12 | 18 |
immature alpha-beta T cell | 1.13e-12 | 18 |
lymphocyte | 1.39e-12 | 53 |
common lymphoid progenitor | 1.39e-12 | 53 |
T cell | 3.17e-09 | 25 |
pro-T cell | 3.17e-09 | 25 |
CD8-positive, alpha-beta T cell | 1.42e-08 | 11 |